RNA–Protein interactions for RNA: ENST00000602499.5

UBE2E3-207, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-207ENST00000602499 CCDC87Q9NVE4 849 aa28.53■■■□□ 2.16
UBE2E3-207ENST00000602499 USP16Q9Y5T5 823 aa28.53■■■□□ 2.16
UBE2E3-207ENST00000602499 HOXB7P09629 217 aa28.52■■■□□ 2.16
UBE2E3-207ENST00000602499 RPS6KA4O75676 772 aa28.51■■■□□ 2.15
UBE2E3-207ENST00000602499 SSFA2P28290 1259 aa28.51■■■□□ 2.15
UBE2E3-207ENST00000602499 GOLGA2Q08379 1002 aa28.51■■■□□ 2.15
UBE2E3-207ENST00000602499 UBR3Q6ZT12 1888 aa28.51■■■□□ 2.15
UBE2E3-207ENST00000602499 GNPATO15228 680 aa28.5■■■□□ 2.15
UBE2E3-207ENST00000602499 MYH16Q9H6N6 1097 aa28.5■■■□□ 2.15
UBE2E3-207ENST00000602499 RTCBQ9Y3I0 505 aaKnown RBP28.5■■■□□ 2.15
UBE2E3-207ENST00000602499 SOS1Q07889 1333 aaPredicted RBP28.49■■■□□ 2.15
UBE2E3-207ENST00000602499 PRAMEF22A3QJZ6 481 aa28.49■■■□□ 2.15
UBE2E3-207ENST00000602499 PNPLA7Q6ZV29 1317 aa28.48■■■□□ 2.15
UBE2E3-207ENST00000602499 LAMB4A4D0S4 1761 aa28.48■■■□□ 2.15
UBE2E3-207ENST00000602499 ADRA2BP18089 450 aa28.48■■■□□ 2.15
UBE2E3-207ENST00000602499 HNRNPUQ00839 825 aaKnown RBP eCLIP28.48■■■□□ 2.15
UBE2E3-207ENST00000602499 TUBGCP6Q96RT7 1819 aa28.48■■■□□ 2.15
UBE2E3-207ENST00000602499 TSR2Q969E8 191 aaKnown RBP28.47■■■□□ 2.15
UBE2E3-207ENST00000602499 SPINK5Q9NQ38 1064 aaPredicted RBP28.47■■■□□ 2.15
UBE2E3-207ENST00000602499 FANCIQ9NVI1 1328 aa28.46■■■□□ 2.15
UBE2E3-207ENST00000602499 E9PSI1 815 aa28.46■■■□□ 2.15
UBE2E3-207ENST00000602499 ZBTB1Q9Y2K1 713 aa28.46■■■□□ 2.15
UBE2E3-207ENST00000602499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.45■■■□□ 2.14
UBE2E3-207ENST00000602499 CHMP4AQ9BY43 222 aa28.45■■■□□ 2.14
UBE2E3-207ENST00000602499 ERBB4Q15303 1308 aa28.44■■■□□ 2.14
UBE2E3-207ENST00000602499 A1BGP04217 495 aa28.44■■■□□ 2.14
UBE2E3-207ENST00000602499 KRT24Q2M2I5 525 aa28.44■■■□□ 2.14
UBE2E3-207ENST00000602499 TRAPPC3LQ5T215 181 aa28.44■■■□□ 2.14
UBE2E3-207ENST00000602499 DUSP27Q5VZP5 1158 aa28.44■■■□□ 2.14
UBE2E3-207ENST00000602499 AMIGO3Q86WK7 504 aa28.44■■■□□ 2.14
UBE2E3-207ENST00000602499 IL6STP40189 918 aaPredicted RBP28.43■■■□□ 2.14
UBE2E3-207ENST00000602499 SLFN5Q08AF3 891 aa28.43■■■□□ 2.14
UBE2E3-207ENST00000602499 COL23A1Q86Y22 540 aaPredicted RBP28.43■■■□□ 2.14
UBE2E3-207ENST00000602499 SLC16A10Q8TF71 515 aa28.43■■■□□ 2.14
UBE2E3-207ENST00000602499 EIF5P55010 431 aaKnown RBP28.42■■■□□ 2.14
UBE2E3-207ENST00000602499 C8orf58Q8NAV2 365 aa28.42■■■□□ 2.14
UBE2E3-207ENST00000602499 CASZ1Q86V15 1759 aa28.42■■■□□ 2.14
UBE2E3-207ENST00000602499 CANXP27824 592 aaKnown RBP28.41■■■□□ 2.14
UBE2E3-207ENST00000602499 TRMT2AQ8IZ69 625 aaKnown RBP28.41■■■□□ 2.14
UBE2E3-207ENST00000602499 ARHGEF1Q92888 912 aaKnown RBP28.4■■■□□ 2.14
UBE2E3-207ENST00000602499 ZBED9Q6R2W3 1325 aa28.4■■■□□ 2.14
UBE2E3-207ENST00000602499 A0A087WZG4 1122 aa28.39■■■□□ 2.14
UBE2E3-207ENST00000602499 PHF14O94880 888 aa28.39■■■□□ 2.14
UBE2E3-207ENST00000602499 NBPF26B4DH59 902 aa28.38■■■□□ 2.13
UBE2E3-207ENST00000602499 EIF2S2P20042 333 aaKnown RBP28.38■■■□□ 2.13
UBE2E3-207ENST00000602499 NBPF10Q6P3W6 841 aaKnown RBP28.38■■■□□ 2.13
UBE2E3-207ENST00000602499 NBPF15Q8N660 670 aa28.38■■■□□ 2.13
UBE2E3-207ENST00000602499 PDGFDQ9GZP0 370 aaPredicted RBP28.38■■■□□ 2.13
UBE2E3-207ENST00000602499 COL15A1P39059 1388 aa28.37■■■□□ 2.13
UBE2E3-207ENST00000602499 RFC4P35249 363 aa28.37■■■□□ 2.13
UBE2E3-207ENST00000602499 HDGFL1Q5TGJ6 251 aa28.37■■■□□ 2.13
UBE2E3-207ENST00000602499 TWISTNBQ3B726 338 aaPredicted RBP28.36■■■□□ 2.13
UBE2E3-207ENST00000602499 SMIM5Q71RC9 77 aa28.36■■■□□ 2.13
UBE2E3-207ENST00000602499 NPM2Q86SE8 214 aaKnown RBP28.36■■■□□ 2.13
UBE2E3-207ENST00000602499 TSPYL6Q8N831 410 aa28.36■■■□□ 2.13
UBE2E3-207ENST00000602499 CDCA7LQ96GN5 454 aa28.36■■■□□ 2.13
UBE2E3-207ENST00000602499 ELL2O00472 640 aaPredicted RBP28.35■■■□□ 2.13
UBE2E3-207ENST00000602499 MSH5O43196 834 aa28.35■■■□□ 2.13
UBE2E3-207ENST00000602499 EXOSC9Q06265 439 aaKnown RBP28.35■■■□□ 2.13
UBE2E3-207ENST00000602499 PDIA6Q15084 440 aa28.35■■■□□ 2.13
UBE2E3-207ENST00000602499 MTFR1LQ9H019 292 aa28.34■■■□□ 2.13
UBE2E3-207ENST00000602499 DDX21Q9NR30 783 aaKnown RBP eCLIP28.34■■■□□ 2.13
UBE2E3-207ENST00000602499 DBF4Q9UBU7 674 aaPredicted RBP28.33■■■□□ 2.13
UBE2E3-207ENST00000602499 NARFQ9UHQ1 456 aa28.33■■■□□ 2.13
UBE2E3-207ENST00000602499 C4AP0C0L4 1744 aa28.32■■■□□ 2.12
UBE2E3-207ENST00000602499 VAMP4O75379 141 aa28.32■■■□□ 2.12
UBE2E3-207ENST00000602499 CCDC30Q5VVM6 783 aa28.32■■■□□ 2.12
UBE2E3-207ENST00000602499 USP42Q9H9J4 1324 aaKnown RBP28.32■■■□□ 2.12
UBE2E3-207ENST00000602499 PIP4K2AP48426 406 aaPredicted RBP28.31■■■□□ 2.12
UBE2E3-207ENST00000602499 LRP10Q7Z4F1 713 aa28.31■■■□□ 2.12
UBE2E3-207ENST00000602499 RGL2O15211 777 aa28.3■■■□□ 2.12
UBE2E3-207ENST00000602499 ZPR1O75312 459 aa28.3■■■□□ 2.12
UBE2E3-207ENST00000602499 MYL6BP14649 208 aa28.29■■■□□ 2.12
UBE2E3-207ENST00000602499 NECTIN2Q92692 538 aa28.29■■■□□ 2.12
UBE2E3-207ENST00000602499 CHPF2Q9P2E5 772 aa28.29■■■□□ 2.12
UBE2E3-207ENST00000602499 ZNF330Q9Y3S2 320 aaPredicted RBP28.29■■■□□ 2.12
UBE2E3-207ENST00000602499 COL24A1Q17RW2 1714 aa28.29■■■□□ 2.12
UBE2E3-207ENST00000602499 ZBTB7AO95365 584 aa28.28■■■□□ 2.12
UBE2E3-207ENST00000602499 GYS1P13807 737 aa28.28■■■□□ 2.12
UBE2E3-207ENST00000602499 NLGN1Q8N2Q7 840 aa28.28■■■□□ 2.12
UBE2E3-207ENST00000602499 SPON1Q9HCB6 807 aa28.28■■■□□ 2.12
UBE2E3-207ENST00000602499 HYPKQ9NX55 129 aa28.28■■■□□ 2.12
UBE2E3-207ENST00000602499 DZIP3Q86Y13 1208 aaKnown RBP28.27■■■□□ 2.12
UBE2E3-207ENST00000602499 CT47B1P0C2W7 299 aaPredicted RBP28.26■■■□□ 2.11
UBE2E3-207ENST00000602499 PROSER3Q2NL68 480 aa28.26■■■□□ 2.11
UBE2E3-207ENST00000602499 ZNF428Q96B54 188 aa28.26■■■□□ 2.11
UBE2E3-207ENST00000602499 SRP68Q9UHB9 627 aaKnown RBP28.26■■■□□ 2.11
UBE2E3-207ENST00000602499 TBC1D2BQ9UPU7 963 aa28.26■■■□□ 2.11
UBE2E3-207ENST00000602499 USPL1Q5W0Q7 1092 aa28.25■■■□□ 2.11
UBE2E3-207ENST00000602499 ERVV-1B6SEH8 477 aa28.24■■■□□ 2.11
UBE2E3-207ENST00000602499 CAMTA2O94983 1202 aa28.24■■■□□ 2.11
UBE2E3-207ENST00000602499 CLEC4GQ6UXB4 293 aa28.24■■■□□ 2.11
UBE2E3-207ENST00000602499 STK31Q9BXU1 1019 aa28.24■■■□□ 2.11
UBE2E3-207ENST00000602499 CACNA1FO60840 1977 aa28.24■■■□□ 2.11
UBE2E3-207ENST00000602499 ANXA1P04083 346 aa28.23■■■□□ 2.11
UBE2E3-207ENST00000602499 ATF5Q9Y2D1 282 aaPredicted RBP28.23■■■□□ 2.11
UBE2E3-207ENST00000602499 KIF6Q6ZMV9 814 aa28.22■■■□□ 2.11
UBE2E3-207ENST00000602499 ARXQ96QS3 562 aa28.22■■■□□ 2.11
UBE2E3-207ENST00000602499 SGIP1Q9BQI5 828 aa28.22■■■□□ 2.11
UBE2E3-207ENST00000602499 BCL2L12Q9HB09 334 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms