RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 GAS2L2Q8NHY3 880 aa6.89□□□□□ -1.31
CKS1BP3-201ENST00000600888 SCG3Q8WXD2 468 aaKnown RBP6.89□□□□□ -1.31
CKS1BP3-201ENST00000600888 A0A1B0GTH6 734 aa6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 TERTO14746 1132 aaKnown RBP6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 PPP1R12BO60237 982 aaPredicted RBP6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 CSB-PGBD3P0DP91 1061 aa6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 WEE1P30291 646 aa6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 PSMA6P60900 246 aaKnown RBP6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 NPAS3Q8IXF0 933 aa6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 ZDHHC1Q8WTX9 485 aa6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 L3MBTL2Q969R5 705 aa6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 AIDAQ96BJ3 306 aa6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 ZNF775Q96BV0 537 aaPredicted RBP6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 GAS2L1Q99501 681 aaPredicted RBP6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 PARP3Q9Y6F1 533 aa6.88□□□□□ -1.31
CKS1BP3-201ENST00000600888 UNC13AQ9UPW8 1703 aa6.87□□□□□ -1.31
CKS1BP3-201ENST00000600888 SERTM1A2A2V5 107 aa6.87□□□□□ -1.31
CKS1BP3-201ENST00000600888 F11P03951 625 aa6.87□□□□□ -1.31
CKS1BP3-201ENST00000600888 IGFBP4P22692 258 aa6.87□□□□□ -1.31
CKS1BP3-201ENST00000600888 VEGFBP49765 207 aa6.87□□□□□ -1.31
CKS1BP3-201ENST00000600888 CHMP7Q8WUX9 453 aaPredicted RBP6.87□□□□□ -1.31
CKS1BP3-201ENST00000600888 DCAF1Q9Y4B6 1507 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 TMEM88BA6NKF7 163 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 EML1O00423 815 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 ITGA6P23229 1130 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 MSX1P28360 303 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 SH3PXD2AQ5TCZ1 1133 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 POTEAQ6S8J7 498 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 STAG2Q8N3U4 1231 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 CLP1Q92989 425 aaKnown RBP6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 PRIMPOLQ96LW4 560 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 ZNF232Q9UNY5 417 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 CHMP3Q9Y3E7 222 aa6.86□□□□□ -1.31
CKS1BP3-201ENST00000600888 H3BM21 787 aa6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 PRMT3O60678 531 aa6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 OCLNQ16625 522 aa6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 NBPF1Q3BBV0 1214 aa6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 RIPOR1Q6ZS17 1223 aa6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 C1orf216Q8TAB5 229 aa6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 C2orf49Q9BVC5 232 aaPredicted RBP6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 GPAMQ9HCL2 828 aa6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 CUEDC1Q9NWM3 386 aaPredicted RBP6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 HCN4Q9Y3Q4 1203 aa6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 ZCCHC6Q5VYS8 1495 aaKnown RBP6.85□□□□□ -1.31
CKS1BP3-201ENST00000600888 CARNS1A5YM72 827 aa6.84□□□□□ -1.31
CKS1BP3-201ENST00000600888 TXLNAP40222 546 aa6.84□□□□□ -1.31
CKS1BP3-201ENST00000600888 HIRAP54198 1017 aaPredicted RBP6.84□□□□□ -1.31
CKS1BP3-201ENST00000600888 SLC16A10Q8TF71 515 aa6.84□□□□□ -1.31
CKS1BP3-201ENST00000600888 ZDHHC3Q9NYG2 299 aa6.84□□□□□ -1.31
CKS1BP3-201ENST00000600888 H7C1W4 665 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 FOXO3O43524 673 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 TATP17735 454 aaPredicted RBP6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 ATP4AP20648 1035 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 NFX1Q12986 1120 aaKnown RBP6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 DBN1Q16643 649 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 TRIM22Q8IYM9 498 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 VWA5B2Q8N398 1253 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 RETREG2Q8NC44 543 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 C7orf43Q8WVR3 580 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 NANOS1Q8WY41 292 aaKnown RBP6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 GMCL1Q96IK5 515 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 RUBCNLQ9H714 662 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 USTQ9Y2C2 406 aa6.83□□□□□ -1.32
CKS1BP3-201ENST00000600888 FKBP5Q13451 457 aaPredicted RBP6.82□□□□□ -1.32
CKS1BP3-201ENST00000600888 C1orf53Q5VUE5 145 aa6.82□□□□□ -1.32
CKS1BP3-201ENST00000600888 PGBD3Q8N328 593 aa6.82□□□□□ -1.32
CKS1BP3-201ENST00000600888 ZIC5Q96T25 663 aa6.82□□□□□ -1.32
CKS1BP3-201ENST00000600888 CRISPLD1Q9H336 500 aa6.82□□□□□ -1.32
CKS1BP3-201ENST00000600888 CXXC1Q9P0U4 656 aaPredicted RBP6.82□□□□□ -1.32
CKS1BP3-201ENST00000600888 A0A1W2PNR3 127 aa6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 CDC14CA4D256 554 aa6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 WFS1O76024 890 aa6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 ATP2B4P23634 1241 aa6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 ARSJQ5FYB0 599 aaPredicted RBP6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 TREML4Q6UXN2 200 aa6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 SV2AQ7L0J3 742 aa6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 ALDH16A1Q8IZ83 802 aa6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 PHACTR1Q9C0D0 580 aa6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
CKS1BP3-201ENST00000600888 ERBB4Q15303 1308 aa6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 THBS1P07996 1170 aa6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 VSIG8P0DPA2 414 aa6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 PDE4CQ08493 712 aa6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 LBRQ14739 615 aaKnown RBP6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 EFHC2Q5JST6 749 aa6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 BICDL1Q6ZP65 573 aa6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 GPR161Q8N6U8 529 aaKnown RBP6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 IRF7Q92985 503 aa6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 VTI1AQ96AJ9 217 aa6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 ZNF837Q96EG3 531 aaPredicted RBP6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 NGLY1Q96IV0 654 aa6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.8□□□□□ -1.32
CKS1BP3-201ENST00000600888 SSFA2P28290 1259 aa6.79□□□□□ -1.32
CKS1BP3-201ENST00000600888 NLRP8Q86W28 1048 aa6.79□□□□□ -1.32
CKS1BP3-201ENST00000600888 GTPBP3Q969Y2 492 aaKnown RBP6.79□□□□□ -1.32
CKS1BP3-201ENST00000600888 GPC6Q9Y625 555 aaPredicted RBP6.79□□□□□ -1.32
CKS1BP3-201ENST00000600888 UBAP2LQ14157 1087 aaKnown RBP6.78□□□□□ -1.32
CKS1BP3-201ENST00000600888 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
CKS1BP3-201ENST00000600888 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms