RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 COL23A1Q86Y22 540 aaPredicted RBP16.92■□□□□ 0.3
SRRM1-223ENST00000600523 IFT57Q9NWB7 429 aa16.92■□□□□ 0.3
SRRM1-223ENST00000600523 COL5A3P25940 1745 aaPredicted RBP16.91■□□□□ 0.3
SRRM1-223ENST00000600523 CHL1O00533 1208 aa16.91■□□□□ 0.3
SRRM1-223ENST00000600523 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
SRRM1-223ENST00000600523 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
SRRM1-223ENST00000600523 TJP1Q07157 1748 aa16.9■□□□□ 0.3
SRRM1-223ENST00000600523 A0A087WZG4 1122 aa16.9■□□□□ 0.3
SRRM1-223ENST00000600523 CANXP27824 592 aaKnown RBP16.9■□□□□ 0.3
SRRM1-223ENST00000600523 INTS5Q6P9B9 1019 aaKnown RBP16.9■□□□□ 0.3
SRRM1-223ENST00000600523 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
SRRM1-223ENST00000600523 PDGFDQ9GZP0 370 aaPredicted RBP16.9■□□□□ 0.3
SRRM1-223ENST00000600523 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
SRRM1-223ENST00000600523 SALL2Q9Y467 1007 aaPredicted RBP16.9■□□□□ 0.3
SRRM1-223ENST00000600523 ZPR1O75312 459 aa16.89■□□□□ 0.29
SRRM1-223ENST00000600523 GIGYF1O75420 1035 aaPredicted RBP16.89■□□□□ 0.29
SRRM1-223ENST00000600523 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.29
SRRM1-223ENST00000600523 CASZ1Q86V15 1759 aa16.89■□□□□ 0.29
SRRM1-223ENST00000600523 KDM3BQ7LBC6 1761 aa16.88■□□□□ 0.29
SRRM1-223ENST00000600523 IL6STP40189 918 aaPredicted RBP16.88■□□□□ 0.29
SRRM1-223ENST00000600523 WDR63Q8IWG1 891 aa16.88■□□□□ 0.29
SRRM1-223ENST00000600523 ARHGEF1Q92888 912 aaKnown RBP16.88■□□□□ 0.29
SRRM1-223ENST00000600523 ARXQ96QS3 562 aa16.88■□□□□ 0.29
SRRM1-223ENST00000600523 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
SRRM1-223ENST00000600523 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
SRRM1-223ENST00000600523 IL16Q14005 1332 aa16.88■□□□□ 0.29
SRRM1-223ENST00000600523 UBR3Q6ZT12 1888 aa16.87■□□□□ 0.29
SRRM1-223ENST00000600523 SENP3-EIF4A1A0A087X0R7 540 aa16.87■□□□□ 0.29
SRRM1-223ENST00000600523 NLGN1Q8N2Q7 840 aa16.87■□□□□ 0.29
SRRM1-223ENST00000600523 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
SRRM1-223ENST00000600523 MBIPQ9NS73 344 aa16.86■□□□□ 0.29
SRRM1-223ENST00000600523 COL15A1P39059 1388 aa16.86■□□□□ 0.29
SRRM1-223ENST00000600523 LRP5O75197 1615 aa16.85■□□□□ 0.29
SRRM1-223ENST00000600523 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
SRRM1-223ENST00000600523 A1BGP04217 495 aa16.85■□□□□ 0.29
SRRM1-223ENST00000600523 HOXB7P09629 217 aa16.85■□□□□ 0.29
SRRM1-223ENST00000600523 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
SRRM1-223ENST00000600523 ZNF853P0CG23 659 aa16.84■□□□□ 0.29
SRRM1-223ENST00000600523 EIF2S2P20042 333 aaKnown RBP16.84■□□□□ 0.29
SRRM1-223ENST00000600523 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
SRRM1-223ENST00000600523 MSL1Q68DK7 614 aa16.84■□□□□ 0.29
SRRM1-223ENST00000600523 MYH16Q9H6N6 1097 aa16.84■□□□□ 0.29
SRRM1-223ENST00000600523 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
SRRM1-223ENST00000600523 SMIM5Q71RC9 77 aa16.83■□□□□ 0.28
SRRM1-223ENST00000600523 AMIGO3Q86WK7 504 aa16.83■□□□□ 0.28
SRRM1-223ENST00000600523 USP42Q9H9J4 1324 aaKnown RBP16.83■□□□□ 0.28
SRRM1-223ENST00000600523 NARFQ9UHQ1 456 aa16.83■□□□□ 0.28
SRRM1-223ENST00000600523 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
SRRM1-223ENST00000600523 PTGER2P43116 358 aa16.82■□□□□ 0.28
SRRM1-223ENST00000600523 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
SRRM1-223ENST00000600523 ZNF652Q9Y2D9 606 aa16.82■□□□□ 0.28
SRRM1-223ENST00000600523 HDGFL1Q5TGJ6 251 aa16.81■□□□□ 0.28
SRRM1-223ENST00000600523 DUSP27Q5VZP5 1158 aa16.81■□□□□ 0.28
SRRM1-223ENST00000600523 KIF6Q6ZMV9 814 aa16.81■□□□□ 0.28
SRRM1-223ENST00000600523 LAMB4A4D0S4 1761 aa16.81■□□□□ 0.28
SRRM1-223ENST00000600523 GYS1P13807 737 aa16.8■□□□□ 0.28
SRRM1-223ENST00000600523 MYL6BP14649 208 aa16.8■□□□□ 0.28
SRRM1-223ENST00000600523 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
SRRM1-223ENST00000600523 DZIP3Q86Y13 1208 aaKnown RBP16.8■□□□□ 0.28
SRRM1-223ENST00000600523 PARP3Q9Y6F1 533 aa16.8■□□□□ 0.28
SRRM1-223ENST00000600523 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
SRRM1-223ENST00000600523 TSR2Q969E8 191 aaKnown RBP16.79■□□□□ 0.28
SRRM1-223ENST00000600523 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
SRRM1-223ENST00000600523 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
SRRM1-223ENST00000600523 DCAF8L1A6NGE4 600 aa16.78■□□□□ 0.28
SRRM1-223ENST00000600523 ELL2O00472 640 aaPredicted RBP16.78■□□□□ 0.28
SRRM1-223ENST00000600523 MMP10P09238 476 aa16.78■□□□□ 0.28
SRRM1-223ENST00000600523 PIP4K2AP48426 406 aaPredicted RBP16.78■□□□□ 0.28
SRRM1-223ENST00000600523 NECTIN2Q92692 538 aa16.78■□□□□ 0.28
SRRM1-223ENST00000600523 SGIP1Q9BQI5 828 aa16.78■□□□□ 0.28
SRRM1-223ENST00000600523 DBF4Q9UBU7 674 aaPredicted RBP16.78■□□□□ 0.28
SRRM1-223ENST00000600523 NBPF26B4DH59 902 aa16.77■□□□□ 0.28
SRRM1-223ENST00000600523 RGL2O15211 777 aa16.77■□□□□ 0.28
SRRM1-223ENST00000600523 KRT24Q2M2I5 525 aa16.77■□□□□ 0.28
SRRM1-223ENST00000600523 CCDC30Q5VVM6 783 aa16.77■□□□□ 0.28
SRRM1-223ENST00000600523 NBPF10Q6P3W6 841 aaKnown RBP16.77■□□□□ 0.28
SRRM1-223ENST00000600523 NBPF15Q8N660 670 aa16.77■□□□□ 0.28
SRRM1-223ENST00000600523 STK31Q9BXU1 1019 aa16.77■□□□□ 0.28
SRRM1-223ENST00000600523 DDX21Q9NR30 783 aaKnown RBP eCLIP16.77■□□□□ 0.28
SRRM1-223ENST00000600523 C4AP0C0L4 1744 aa16.76■□□□□ 0.27
SRRM1-223ENST00000600523 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
SRRM1-223ENST00000600523 E9PSI1 815 aa16.76■□□□□ 0.27
SRRM1-223ENST00000600523 NPHP1O15259 732 aa16.76■□□□□ 0.27
SRRM1-223ENST00000600523 FKBP8Q14318 412 aa16.76■□□□□ 0.27
SRRM1-223ENST00000600523 TWISTNBQ3B726 338 aaPredicted RBP16.76■□□□□ 0.27
SRRM1-223ENST00000600523 CLEC4GQ6UXB4 293 aa16.76■□□□□ 0.27
SRRM1-223ENST00000600523 HYPKQ9NX55 129 aa16.76■□□□□ 0.27
SRRM1-223ENST00000600523 C8orf58Q8NAV2 365 aa16.75■□□□□ 0.27
SRRM1-223ENST00000600523 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
SRRM1-223ENST00000600523 ERVV-1B6SEH8 477 aa16.74■□□□□ 0.27
SRRM1-223ENST00000600523 HNRNPUQ00839 825 aaKnown RBP eCLIP16.74■□□□□ 0.27
SRRM1-223ENST00000600523 SETDB2Q96T68 719 aa16.74■□□□□ 0.27
SRRM1-223ENST00000600523 FHDC1Q9C0D6 1143 aaPredicted RBP16.74■□□□□ 0.27
SRRM1-223ENST00000600523 CD2APQ9Y5K6 639 aa16.74■□□□□ 0.27
SRRM1-223ENST00000600523 ZNF521Q96K83 1311 aa16.73■□□□□ 0.27
SRRM1-223ENST00000600523 CAMTA2O94983 1202 aa16.73■□□□□ 0.27
SRRM1-223ENST00000600523 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
SRRM1-223ENST00000600523 MAP3K15Q6ZN16 1313 aa16.72■□□□□ 0.27
SRRM1-223ENST00000600523 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
SRRM1-223ENST00000600523 NFIXQ14938 502 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms