RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 COL23A1Q86Y22 540 aaPredicted RBP17.96■□□□□ 0.47
VRK3-219ENST00000600137 TFCP2L1Q9NZI6 479 aa17.96■□□□□ 0.47
VRK3-219ENST00000600137 LAS1LQ9Y4W2 734 aaKnown RBP17.96■□□□□ 0.47
VRK3-219ENST00000600137 IL16Q14005 1332 aa17.96■□□□□ 0.46
VRK3-219ENST00000600137 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
VRK3-219ENST00000600137 GNAI1P63096 354 aa17.95■□□□□ 0.46
VRK3-219ENST00000600137 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
VRK3-219ENST00000600137 CALD1Q05682 793 aaKnown RBP17.94■□□□□ 0.46
VRK3-219ENST00000600137 AK7Q96M32 723 aa17.94■□□□□ 0.46
VRK3-219ENST00000600137 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
VRK3-219ENST00000600137 ZBTB1Q9Y2K1 713 aa17.94■□□□□ 0.46
VRK3-219ENST00000600137 GNPATO15228 680 aa17.93■□□□□ 0.46
VRK3-219ENST00000600137 A1BGP04217 495 aa17.93■□□□□ 0.46
VRK3-219ENST00000600137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.92■□□□□ 0.46
VRK3-219ENST00000600137 NBPF26B4DH59 902 aa17.92■□□□□ 0.46
VRK3-219ENST00000600137 STARD3NLO95772 234 aa17.92■□□□□ 0.46
VRK3-219ENST00000600137 SSFA2P28290 1259 aa17.92■□□□□ 0.46
VRK3-219ENST00000600137 NBPF10Q6P3W6 841 aaKnown RBP17.92■□□□□ 0.46
VRK3-219ENST00000600137 NBPF15Q8N660 670 aa17.92■□□□□ 0.46
VRK3-219ENST00000600137 EIF5P55010 431 aaKnown RBP17.91■□□□□ 0.46
VRK3-219ENST00000600137 ARHGEF1Q92888 912 aaKnown RBP17.91■□□□□ 0.46
VRK3-219ENST00000600137 TSR2Q969E8 191 aaKnown RBP17.91■□□□□ 0.46
VRK3-219ENST00000600137 RTCBQ9Y3I0 505 aaKnown RBP17.91■□□□□ 0.46
VRK3-219ENST00000600137 SOS1Q07889 1333 aaPredicted RBP17.91■□□□□ 0.46
VRK3-219ENST00000600137 LAMB4A4D0S4 1761 aa17.9■□□□□ 0.46
VRK3-219ENST00000600137 C8orf58Q8NAV2 365 aa17.9■□□□□ 0.46
VRK3-219ENST00000600137 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
VRK3-219ENST00000600137 COL24A1Q17RW2 1714 aa17.89■□□□□ 0.46
VRK3-219ENST00000600137 SRCAPQ6ZRS2 3230 aa17.89■□□□□ 0.46
VRK3-219ENST00000600137 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
VRK3-219ENST00000600137 PDIA6Q15084 440 aa17.89■□□□□ 0.45
VRK3-219ENST00000600137 PHF14O94880 888 aa17.88■□□□□ 0.45
VRK3-219ENST00000600137 ADRA2BP18089 450 aa17.88■□□□□ 0.45
VRK3-219ENST00000600137 CANXP27824 592 aaKnown RBP17.88■□□□□ 0.45
VRK3-219ENST00000600137 TRAPPC3LQ5T215 181 aa17.88■□□□□ 0.45
VRK3-219ENST00000600137 LRP10Q7Z4F1 713 aa17.88■□□□□ 0.45
VRK3-219ENST00000600137 TSPYL6Q8N831 410 aa17.88■□□□□ 0.45
VRK3-219ENST00000600137 SLC16A10Q8TF71 515 aa17.88■□□□□ 0.45
VRK3-219ENST00000600137 C4AP0C0L4 1744 aa17.87■□□□□ 0.45
VRK3-219ENST00000600137 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
VRK3-219ENST00000600137 DUSP27Q5VZP5 1158 aa17.87■□□□□ 0.45
VRK3-219ENST00000600137 TRMT2AQ8IZ69 625 aaKnown RBP17.87■□□□□ 0.45
VRK3-219ENST00000600137 SGIP1Q9BQI5 828 aa17.87■□□□□ 0.45
VRK3-219ENST00000600137 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
VRK3-219ENST00000600137 ZBTB7AO95365 584 aa17.86■□□□□ 0.45
VRK3-219ENST00000600137 HOXB7P09629 217 aa17.86■□□□□ 0.45
VRK3-219ENST00000600137 PTGER2P43116 358 aa17.86■□□□□ 0.45
VRK3-219ENST00000600137 SLFN5Q08AF3 891 aa17.86■□□□□ 0.45
VRK3-219ENST00000600137 CDCA7LQ96GN5 454 aa17.86■□□□□ 0.45
VRK3-219ENST00000600137 GOLGA2Q08379 1002 aa17.85■□□□□ 0.45
VRK3-219ENST00000600137 MTFR1LQ9H019 292 aa17.85■□□□□ 0.45
VRK3-219ENST00000600137 COL15A1P39059 1388 aa17.84■□□□□ 0.45
VRK3-219ENST00000600137 ELL2O00472 640 aaPredicted RBP17.84■□□□□ 0.45
VRK3-219ENST00000600137 EIF2S2P20042 333 aaKnown RBP17.84■□□□□ 0.45
VRK3-219ENST00000600137 PROSER3Q2NL68 480 aa17.84■□□□□ 0.45
VRK3-219ENST00000600137 BCL2L12Q9HB09 334 aa17.84■□□□□ 0.45
VRK3-219ENST00000600137 SRP68Q9UHB9 627 aaKnown RBP17.84■□□□□ 0.45
VRK3-219ENST00000600137 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
VRK3-219ENST00000600137 ERBB4Q15303 1308 aa17.83■□□□□ 0.44
VRK3-219ENST00000600137 USP42Q9H9J4 1324 aaKnown RBP17.83■□□□□ 0.44
VRK3-219ENST00000600137 GYS1P13807 737 aa17.83■□□□□ 0.44
VRK3-219ENST00000600137 NARFQ9UHQ1 456 aa17.83■□□□□ 0.44
VRK3-219ENST00000600137 VAMP4O75379 141 aa17.82■□□□□ 0.44
VRK3-219ENST00000600137 ANXA1P04083 346 aa17.82■□□□□ 0.44
VRK3-219ENST00000600137 HNRNPUQ00839 825 aaKnown RBP eCLIP17.82■□□□□ 0.44
VRK3-219ENST00000600137 EXOSC9Q06265 439 aaKnown RBP17.82■□□□□ 0.44
VRK3-219ENST00000600137 NECTIN2Q92692 538 aa17.82■□□□□ 0.44
VRK3-219ENST00000600137 MSH5O43196 834 aa17.81■□□□□ 0.44
VRK3-219ENST00000600137 RFC4P35249 363 aa17.81■□□□□ 0.44
VRK3-219ENST00000600137 MYH16Q9H6N6 1097 aa17.81■□□□□ 0.44
VRK3-219ENST00000600137 SPON1Q9HCB6 807 aa17.81■□□□□ 0.44
VRK3-219ENST00000600137 TBC1D2BQ9UPU7 963 aa17.81■□□□□ 0.44
VRK3-219ENST00000600137 E9PSI1 815 aa17.8■□□□□ 0.44
VRK3-219ENST00000600137 CAMTA2O94983 1202 aa17.8■□□□□ 0.44
VRK3-219ENST00000600137 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
VRK3-219ENST00000600137 USPL1Q5W0Q7 1092 aa17.8■□□□□ 0.44
VRK3-219ENST00000600137 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
VRK3-219ENST00000600137 DDX21Q9NR30 783 aaKnown RBP eCLIP17.8■□□□□ 0.44
VRK3-219ENST00000600137 A0A087WZG4 1122 aa17.79■□□□□ 0.44
VRK3-219ENST00000600137 MYL6BP14649 208 aa17.79■□□□□ 0.44
VRK3-219ENST00000600137 FKBP8Q14318 412 aa17.79■□□□□ 0.44
VRK3-219ENST00000600137 TWISTNBQ3B726 338 aaPredicted RBP17.79■□□□□ 0.44
VRK3-219ENST00000600137 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
VRK3-219ENST00000600137 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
VRK3-219ENST00000600137 LRP5O75197 1615 aa17.79■□□□□ 0.44
VRK3-219ENST00000600137 TM4SF1P30408 202 aa17.78■□□□□ 0.44
VRK3-219ENST00000600137 DZIP3Q86Y13 1208 aaKnown RBP17.77■□□□□ 0.44
VRK3-219ENST00000600137 NLGN1Q8N2Q7 840 aa17.77■□□□□ 0.44
VRK3-219ENST00000600137 ZNF330Q9Y3S2 320 aaPredicted RBP17.77■□□□□ 0.44
VRK3-219ENST00000600137 BCORQ6W2J9 1755 aa17.76■□□□□ 0.43
VRK3-219ENST00000600137 ZPR1O75312 459 aa17.76■□□□□ 0.43
VRK3-219ENST00000600137 DBF4Q9UBU7 674 aaPredicted RBP17.76■□□□□ 0.43
VRK3-219ENST00000600137 SCN7AQ01118 1682 aa17.76■□□□□ 0.43
VRK3-219ENST00000600137 ZBED9Q6R2W3 1325 aa17.75■□□□□ 0.43
VRK3-219ENST00000600137 HLFQ16534 295 aa17.75■□□□□ 0.43
VRK3-219ENST00000600137 COPS6Q7L5N1 327 aa17.75■□□□□ 0.43
VRK3-219ENST00000600137 TCERG1O14776 1098 aaKnown RBP17.74■□□□□ 0.43
VRK3-219ENST00000600137 DDR1Q08345 913 aa17.74■□□□□ 0.43
VRK3-219ENST00000600137 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
VRK3-219ENST00000600137 XAGE3Q8WTP9 111 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms