RNA–Protein interactions for RNA: ENST00000599429.5

GTPBP3-220, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-220ENST00000599429 SYT17Q9BSW7 474 aa23.4■■□□□ 1.34
GTPBP3-220ENST00000599429 NEUROD2Q15784 382 aa23.39■■□□□ 1.33
GTPBP3-220ENST00000599429 PNISRQ8TF01 805 aaKnown RBP23.39■■□□□ 1.33
GTPBP3-220ENST00000599429 ZBTB1Q9Y2K1 713 aa23.39■■□□□ 1.33
GTPBP3-220ENST00000599429 SOS1Q07889 1333 aaPredicted RBP23.38■■□□□ 1.33
GTPBP3-220ENST00000599429 LMOD3Q0VAK6 560 aa23.38■■□□□ 1.33
GTPBP3-220ENST00000599429 SNRPA1P09661 255 aaKnown RBP23.36■■□□□ 1.33
GTPBP3-220ENST00000599429 GYS1P13807 737 aa23.36■■□□□ 1.33
GTPBP3-220ENST00000599429 TRIM35Q9UPQ4 493 aa23.36■■□□□ 1.33
GTPBP3-220ENST00000599429 USP16Q9Y5T5 823 aa23.36■■□□□ 1.33
GTPBP3-220ENST00000599429 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
GTPBP3-220ENST00000599429 PRAMEF22A3QJZ6 481 aa23.35■■□□□ 1.33
GTPBP3-220ENST00000599429 CANXP27824 592 aaKnown RBP23.35■■□□□ 1.33
GTPBP3-220ENST00000599429 NLGN1Q8N2Q7 840 aa23.35■■□□□ 1.33
GTPBP3-220ENST00000599429 MRS2Q9HD23 443 aa23.35■■□□□ 1.33
GTPBP3-220ENST00000599429 SRP68Q9UHB9 627 aaKnown RBP23.34■■□□□ 1.33
GTPBP3-220ENST00000599429 KDM3BQ7LBC6 1761 aa23.34■■□□□ 1.33
GTPBP3-220ENST00000599429 APAF1O14727 1248 aa23.33■■□□□ 1.33
GTPBP3-220ENST00000599429 A1BGP04217 495 aa23.33■■□□□ 1.33
GTPBP3-220ENST00000599429 EIF5P55010 431 aaKnown RBP23.33■■□□□ 1.33
GTPBP3-220ENST00000599429 USP42Q9H9J4 1324 aaKnown RBP23.33■■□□□ 1.32
GTPBP3-220ENST00000599429 EIF4A1P60842 406 aaKnown RBP23.32■■□□□ 1.32
GTPBP3-220ENST00000599429 KLHL34Q8N239 644 aa23.32■■□□□ 1.32
GTPBP3-220ENST00000599429 COL15A1P39059 1388 aa23.31■■□□□ 1.32
GTPBP3-220ENST00000599429 MMP10P09238 476 aa23.31■■□□□ 1.32
GTPBP3-220ENST00000599429 BABAM1Q9NWV8 329 aa23.31■■□□□ 1.32
GTPBP3-220ENST00000599429 NARFQ9UHQ1 456 aa23.31■■□□□ 1.32
GTPBP3-220ENST00000599429 ZPR1O75312 459 aa23.3■■□□□ 1.32
GTPBP3-220ENST00000599429 IL6STP40189 918 aaPredicted RBP23.3■■□□□ 1.32
GTPBP3-220ENST00000599429 TSPYL4Q9UJ04 414 aa23.3■■□□□ 1.32
GTPBP3-220ENST00000599429 GIGYF1O75420 1035 aaPredicted RBP23.29■■□□□ 1.32
GTPBP3-220ENST00000599429 FKBP8Q14318 412 aa23.29■■□□□ 1.32
GTPBP3-220ENST00000599429 USPL1Q5W0Q7 1092 aa23.29■■□□□ 1.32
GTPBP3-220ENST00000599429 A0A087WZG4 1122 aa23.28■■□□□ 1.32
GTPBP3-220ENST00000599429 CD2APQ9Y5K6 639 aa23.28■■□□□ 1.32
GTPBP3-220ENST00000599429 NLGN2Q8NFZ4 835 aa23.27■■□□□ 1.32
GTPBP3-220ENST00000599429 CHL1O00533 1208 aa23.26■■□□□ 1.31
GTPBP3-220ENST00000599429 PIP4K2AP48426 406 aaPredicted RBP23.25■■□□□ 1.31
GTPBP3-220ENST00000599429 BCL2L12Q9HB09 334 aa23.25■■□□□ 1.31
GTPBP3-220ENST00000599429 ZNF330Q9Y3S2 320 aaPredicted RBP23.25■■□□□ 1.31
GTPBP3-220ENST00000599429 PARP3Q9Y6F1 533 aa23.25■■□□□ 1.31
GTPBP3-220ENST00000599429 DCAF8L1A6NGE4 600 aa23.24■■□□□ 1.31
GTPBP3-220ENST00000599429 NBPF26B4DH59 902 aa23.24■■□□□ 1.31
GTPBP3-220ENST00000599429 TM4SF1P30408 202 aa23.24■■□□□ 1.31
GTPBP3-220ENST00000599429 NBPF10Q6P3W6 841 aaKnown RBP23.24■■□□□ 1.31
GTPBP3-220ENST00000599429 NBPF15Q8N660 670 aa23.24■■□□□ 1.31
GTPBP3-220ENST00000599429 TBC1D2BQ9UPU7 963 aa23.24■■□□□ 1.31
GTPBP3-220ENST00000599429 NPM2Q86SE8 214 aaKnown RBP23.23■■□□□ 1.31
GTPBP3-220ENST00000599429 LAS1LQ9Y4W2 734 aaKnown RBP23.23■■□□□ 1.31
GTPBP3-220ENST00000599429 DDR1Q08345 913 aa23.22■■□□□ 1.31
GTPBP3-220ENST00000599429 LAMB4A4D0S4 1761 aa23.22■■□□□ 1.31
GTPBP3-220ENST00000599429 CFAP44Q96MT7 982 aa23.21■■□□□ 1.31
GTPBP3-220ENST00000599429 NFIXQ14938 502 aa23.2■■□□□ 1.3
GTPBP3-220ENST00000599429 POLRMTO00411 1230 aaKnown RBP23.19■■□□□ 1.3
GTPBP3-220ENST00000599429 ZNF853P0CG23 659 aa23.19■■□□□ 1.3
GTPBP3-220ENST00000599429 DZIP3Q86Y13 1208 aaKnown RBP23.19■■□□□ 1.3
GTPBP3-220ENST00000599429 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
GTPBP3-220ENST00000599429 CAMTA2O94983 1202 aa23.18■■□□□ 1.3
GTPBP3-220ENST00000599429 CALD1Q05682 793 aaKnown RBP23.18■■□□□ 1.3
GTPBP3-220ENST00000599429 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
GTPBP3-220ENST00000599429 GOLGB1Q14789 3259 aaKnown RBP23.17■■□□□ 1.3
GTPBP3-220ENST00000599429 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
GTPBP3-220ENST00000599429 UTRNP46939 3433 aa23.17■■□□□ 1.3
GTPBP3-220ENST00000599429 CCDC27Q2M243 656 aa23.16■■□□□ 1.3
GTPBP3-220ENST00000599429 KRT24Q2M2I5 525 aa23.16■■□□□ 1.3
GTPBP3-220ENST00000599429 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
GTPBP3-220ENST00000599429 IFT57Q9NWB7 429 aa23.16■■□□□ 1.3
GTPBP3-220ENST00000599429 C10orf71Q711Q0 1435 aa23.16■■□□□ 1.3
GTPBP3-220ENST00000599429 EIF2S2P20042 333 aaKnown RBP23.15■■□□□ 1.3
GTPBP3-220ENST00000599429 GNAI1P63096 354 aa23.15■■□□□ 1.3
GTPBP3-220ENST00000599429 GPR162Q16538 588 aa23.15■■□□□ 1.3
GTPBP3-220ENST00000599429 TBC1D9BQ66K14 1250 aa23.15■■□□□ 1.3
GTPBP3-220ENST00000599429 MBIPQ9NS73 344 aa23.15■■□□□ 1.3
GTPBP3-220ENST00000599429 SCN7AQ01118 1682 aa23.15■■□□□ 1.3
GTPBP3-220ENST00000599429 ERBB4Q15303 1308 aa23.14■■□□□ 1.3
GTPBP3-220ENST00000599429 BICDL1Q6ZP65 573 aa23.14■■□□□ 1.29
GTPBP3-220ENST00000599429 WWC1Q8IX03 1113 aa23.14■■□□□ 1.29
GTPBP3-220ENST00000599429 AFDNP55196 1824 aaKnown RBP23.13■■□□□ 1.29
GTPBP3-220ENST00000599429 SERPINB2P05120 415 aa23.13■■□□□ 1.29
GTPBP3-220ENST00000599429 TGFB2P61812 414 aa23.13■■□□□ 1.29
GTPBP3-220ENST00000599429 PELP1Q8IZL8 1130 aaKnown RBP23.13■■□□□ 1.29
GTPBP3-220ENST00000599429 NGEFQ8N5V2 710 aa23.13■■□□□ 1.29
GTPBP3-220ENST00000599429 MYL6BP14649 208 aa23.12■■□□□ 1.29
GTPBP3-220ENST00000599429 PDIA6Q15084 440 aa23.12■■□□□ 1.29
GTPBP3-220ENST00000599429 CLEC4GQ6UXB4 293 aa23.12■■□□□ 1.29
GTPBP3-220ENST00000599429 BCORQ6W2J9 1755 aa23.12■■□□□ 1.29
GTPBP3-220ENST00000599429 RGL2O15211 777 aa23.11■■□□□ 1.29
GTPBP3-220ENST00000599429 NRXN2Q9P2S2 1712 aa23.11■■□□□ 1.29
GTPBP3-220ENST00000599429 A0A0G2JLW4 131 aa23.1■■□□□ 1.29
GTPBP3-220ENST00000599429 HOXB7P09629 217 aa23.1■■□□□ 1.29
GTPBP3-220ENST00000599429 YBX3P16989 372 aaKnown RBP eCLIP23.1■■□□□ 1.297e-7■■■■□ 21.8
GTPBP3-220ENST00000599429 SETDB2Q96T68 719 aa23.1■■□□□ 1.29
GTPBP3-220ENST00000599429 KIAA1551Q9HCM1 1747 aa23.1■■□□□ 1.29
GTPBP3-220ENST00000599429 PXDNLA1KZ92 1463 aa23.1■■□□□ 1.29
GTPBP3-220ENST00000599429 DPEP1P16444 411 aa23.09■■□□□ 1.29
GTPBP3-220ENST00000599429 DUSP27Q5VZP5 1158 aa23.09■■□□□ 1.29
GTPBP3-220ENST00000599429 TTLL7Q6ZT98 887 aa23.09■■□□□ 1.29
GTPBP3-220ENST00000599429 LRP10Q7Z4F1 713 aa23.09■■□□□ 1.29
GTPBP3-220ENST00000599429 NECTIN2Q92692 538 aa23.09■■□□□ 1.29
GTPBP3-220ENST00000599429 ZNF652Q9Y2D9 606 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms