RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 THUMPD2Q9BTF0 503 aaKnown RBP16.5■□□□□ 0.23
SYMPK-210ENST00000598329 MSH5O43196 834 aa16.49■□□□□ 0.23
SYMPK-210ENST00000598329 GYS1P13807 737 aa16.49■□□□□ 0.23
SYMPK-210ENST00000598329 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
SYMPK-210ENST00000598329 NLGN1Q8N2Q7 840 aa16.49■□□□□ 0.23
SYMPK-210ENST00000598329 PPP1R1BQ9UD71 204 aaPredicted RBP16.49■□□□□ 0.23
SYMPK-210ENST00000598329 ZBTB1Q9Y2K1 713 aa16.49■□□□□ 0.23
SYMPK-210ENST00000598329 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
SYMPK-210ENST00000598329 CHL1O00533 1208 aa16.48■□□□□ 0.23
SYMPK-210ENST00000598329 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
SYMPK-210ENST00000598329 SYT17Q9BSW7 474 aa16.48■□□□□ 0.23
SYMPK-210ENST00000598329 MRS2Q9HD23 443 aa16.48■□□□□ 0.23
SYMPK-210ENST00000598329 MIS18AQ9NYP9 233 aa16.48■□□□□ 0.23
SYMPK-210ENST00000598329 RRP7AQ9Y3A4 280 aaKnown RBP16.48■□□□□ 0.23
SYMPK-210ENST00000598329 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
SYMPK-210ENST00000598329 APAF1O14727 1248 aa16.47■□□□□ 0.23
SYMPK-210ENST00000598329 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
SYMPK-210ENST00000598329 RFC4P35249 363 aa16.47■□□□□ 0.23
SYMPK-210ENST00000598329 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
SYMPK-210ENST00000598329 KDM3BQ7LBC6 1761 aa16.46■□□□□ 0.23
SYMPK-210ENST00000598329 CCDC27Q2M243 656 aa16.46■□□□□ 0.23
SYMPK-210ENST00000598329 NARFQ9UHQ1 456 aa16.46■□□□□ 0.23
SYMPK-210ENST00000598329 PRAMEF22A3QJZ6 481 aa16.45■□□□□ 0.22
SYMPK-210ENST00000598329 ZNF853P0CG23 659 aa16.45■□□□□ 0.22
SYMPK-210ENST00000598329 MSL1Q68DK7 614 aa16.45■□□□□ 0.22
SYMPK-210ENST00000598329 COL15A1P39059 1388 aa16.45■□□□□ 0.22
SYMPK-210ENST00000598329 A0A087WZG4 1122 aa16.44■□□□□ 0.22
SYMPK-210ENST00000598329 RGL2O15211 777 aa16.44■□□□□ 0.22
SYMPK-210ENST00000598329 A1BGP04217 495 aa16.44■□□□□ 0.22
SYMPK-210ENST00000598329 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
SYMPK-210ENST00000598329 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
SYMPK-210ENST00000598329 TSPYL4Q9UJ04 414 aa16.44■□□□□ 0.22
SYMPK-210ENST00000598329 CD2APQ9Y5K6 639 aa16.44■□□□□ 0.22
SYMPK-210ENST00000598329 C4AP0C0L4 1744 aa16.43■□□□□ 0.22
SYMPK-210ENST00000598329 TM4SF1P30408 202 aa16.43■□□□□ 0.22
SYMPK-210ENST00000598329 BCL2L12Q9HB09 334 aa16.43■□□□□ 0.22
SYMPK-210ENST00000598329 NBPF26B4DH59 902 aa16.42■□□□□ 0.22
SYMPK-210ENST00000598329 MMP10P09238 476 aa16.42■□□□□ 0.22
SYMPK-210ENST00000598329 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
SYMPK-210ENST00000598329 NBPF10Q6P3W6 841 aaKnown RBP16.42■□□□□ 0.22
SYMPK-210ENST00000598329 NBPF15Q8N660 670 aa16.42■□□□□ 0.22
SYMPK-210ENST00000598329 SRP68Q9UHB9 627 aaKnown RBP16.42■□□□□ 0.22
SYMPK-210ENST00000598329 UTRNP46939 3433 aa16.41■□□□□ 0.22
SYMPK-210ENST00000598329 ZPR1O75312 459 aa16.41■□□□□ 0.22
SYMPK-210ENST00000598329 CALD1Q05682 793 aaKnown RBP16.41■□□□□ 0.22
SYMPK-210ENST00000598329 FKBP8Q14318 412 aa16.41■□□□□ 0.22
SYMPK-210ENST00000598329 ERBB4Q15303 1308 aa16.41■□□□□ 0.22
SYMPK-210ENST00000598329 USPL1Q5W0Q7 1092 aa16.4■□□□□ 0.22
SYMPK-210ENST00000598329 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
SYMPK-210ENST00000598329 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
SYMPK-210ENST00000598329 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
SYMPK-210ENST00000598329 CCER2I3L3R5 266 aa16.39■□□□□ 0.21
SYMPK-210ENST00000598329 HOXB7P09629 217 aa16.39■□□□□ 0.21
SYMPK-210ENST00000598329 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
SYMPK-210ENST00000598329 POLRMTO00411 1230 aaKnown RBP16.38■□□□□ 0.21
SYMPK-210ENST00000598329 CAMTA2O94983 1202 aa16.38■□□□□ 0.21
SYMPK-210ENST00000598329 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
SYMPK-210ENST00000598329 WWC1Q8IX03 1113 aa16.38■□□□□ 0.21
SYMPK-210ENST00000598329 GNAI1P63096 354 aa16.37■□□□□ 0.21
SYMPK-210ENST00000598329 DDR1Q08345 913 aa16.37■□□□□ 0.21
SYMPK-210ENST00000598329 PDIA6Q15084 440 aa16.37■□□□□ 0.21
SYMPK-210ENST00000598329 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
SYMPK-210ENST00000598329 IL16Q14005 1332 aa16.37■□□□□ 0.21
SYMPK-210ENST00000598329 NFIXQ14938 502 aa16.36■□□□□ 0.21
SYMPK-210ENST00000598329 NLGN2Q8NFZ4 835 aa16.36■□□□□ 0.21
SYMPK-210ENST00000598329 TBC1D2BQ9UPU7 963 aa16.36■□□□□ 0.21
SYMPK-210ENST00000598329 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
SYMPK-210ENST00000598329 LAMB4A4D0S4 1761 aa16.36■□□□□ 0.21
SYMPK-210ENST00000598329 C10orf71Q711Q0 1435 aa16.36■□□□□ 0.21
SYMPK-210ENST00000598329 TGFB2P61812 414 aa16.35■□□□□ 0.21
SYMPK-210ENST00000598329 DZIP3Q86Y13 1208 aaKnown RBP16.35■□□□□ 0.21
SYMPK-210ENST00000598329 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
SYMPK-210ENST00000598329 WDR63Q8IWG1 891 aa16.34■□□□□ 0.21
SYMPK-210ENST00000598329 KIF13BQ9NQT8 1826 aa16.33■□□□□ 0.21
SYMPK-210ENST00000598329 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.2
SYMPK-210ENST00000598329 NPM2Q86SE8 214 aaKnown RBP16.33■□□□□ 0.2
SYMPK-210ENST00000598329 SCN7AQ01118 1682 aa16.32■□□□□ 0.2
SYMPK-210ENST00000598329 KRT24Q2M2I5 525 aa16.32■□□□□ 0.2
SYMPK-210ENST00000598329 TBC1D9BQ66K14 1250 aa16.32■□□□□ 0.2
SYMPK-210ENST00000598329 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
SYMPK-210ENST00000598329 NRXN2Q9P2S2 1712 aa16.32■□□□□ 0.2
SYMPK-210ENST00000598329 LAS1LQ9Y4W2 734 aaKnown RBP16.32■□□□□ 0.2
SYMPK-210ENST00000598329 SERPINB2P05120 415 aa16.31■□□□□ 0.2
SYMPK-210ENST00000598329 DDX21Q9NR30 783 aaKnown RBP eCLIP16.31■□□□□ 0.2
SYMPK-210ENST00000598329 PXDNLA1KZ92 1463 aa16.3■□□□□ 0.2
SYMPK-210ENST00000598329 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
SYMPK-210ENST00000598329 ZNF521Q96K83 1311 aa16.3■□□□□ 0.2
SYMPK-210ENST00000598329 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
SYMPK-210ENST00000598329 ZNF652Q9Y2D9 606 aa16.3■□□□□ 0.2
SYMPK-210ENST00000598329 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
SYMPK-210ENST00000598329 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
SYMPK-210ENST00000598329 BCORQ6W2J9 1755 aa16.29■□□□□ 0.2
SYMPK-210ENST00000598329 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
SYMPK-210ENST00000598329 KCNA3P22001 575 aa16.29■□□□□ 0.2
SYMPK-210ENST00000598329 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
SYMPK-210ENST00000598329 HLFQ16534 295 aa16.28■□□□□ 0.2
SYMPK-210ENST00000598329 PROSER3Q2NL68 480 aa16.28■□□□□ 0.2
SYMPK-210ENST00000598329 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
SYMPK-210ENST00000598329 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
SYMPK-210ENST00000598329 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms