RNA–Protein interactions for RNA: ENST00000596250.5

SOX2-OT-225, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 610 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-225ENST00000596250 RPS6KA4O75676 772 aa17.83■□□□□ 0.44
SOX2-OT-225ENST00000596250 SGIP1Q9BQI5 828 aa17.83■□□□□ 0.44
SOX2-OT-225ENST00000596250 CCDC87Q9NVE4 849 aa17.83■□□□□ 0.44
SOX2-OT-225ENST00000596250 SENP3-EIF4A1A0A087X0R7 540 aa17.82■□□□□ 0.44
SOX2-OT-225ENST00000596250 PRAMEF22A3QJZ6 481 aa17.82■□□□□ 0.44
SOX2-OT-225ENST00000596250 ZBTB1Q9Y2K1 713 aa17.81■□□□□ 0.44
SOX2-OT-225ENST00000596250 KDM3BQ7LBC6 1761 aa17.81■□□□□ 0.44
SOX2-OT-225ENST00000596250 STARD3NLO95772 234 aa17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 EIF4A1P60842 406 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 CALD1Q05682 793 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 ARHGEF1Q92888 912 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 TEX13AQ9BXU3 409 aaPredicted RBP17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 TSPYL4Q9UJ04 414 aa17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
SOX2-OT-225ENST00000596250 SOS1Q07889 1333 aaPredicted RBP17.79■□□□□ 0.44
SOX2-OT-225ENST00000596250 SNRPA1P09661 255 aaKnown RBP17.79■□□□□ 0.44
SOX2-OT-225ENST00000596250 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
SOX2-OT-225ENST00000596250 BABAM1Q9NWV8 329 aa17.78■□□□□ 0.44
SOX2-OT-225ENST00000596250 SALL2Q9Y467 1007 aaPredicted RBP17.78■□□□□ 0.44
SOX2-OT-225ENST00000596250 CHL1O00533 1208 aa17.77■□□□□ 0.44
SOX2-OT-225ENST00000596250 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
SOX2-OT-225ENST00000596250 COL24A1Q17RW2 1714 aa17.76■□□□□ 0.43
SOX2-OT-225ENST00000596250 GIGYF1O75420 1035 aaPredicted RBP17.76■□□□□ 0.43
SOX2-OT-225ENST00000596250 A1BGP04217 495 aa17.76■□□□□ 0.43
SOX2-OT-225ENST00000596250 PPP1R1BQ9UD71 204 aaPredicted RBP17.76■□□□□ 0.43
SOX2-OT-225ENST00000596250 LAS1LQ9Y4W2 734 aaKnown RBP17.76■□□□□ 0.43
SOX2-OT-225ENST00000596250 COL15A1P39059 1388 aa17.76■□□□□ 0.43
SOX2-OT-225ENST00000596250 RFC4P35249 363 aa17.75■□□□□ 0.43
SOX2-OT-225ENST00000596250 CCDC27Q2M243 656 aa17.75■□□□□ 0.43
SOX2-OT-225ENST00000596250 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
SOX2-OT-225ENST00000596250 YTHDC1Q96MU7 727 aaKnown RBP17.75■□□□□ 0.43
SOX2-OT-225ENST00000596250 SRP68Q9UHB9 627 aaKnown RBP17.75■□□□□ 0.43
SOX2-OT-225ENST00000596250 USP42Q9H9J4 1324 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-225ENST00000596250 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
SOX2-OT-225ENST00000596250 GYS1P13807 737 aa17.74■□□□□ 0.43
SOX2-OT-225ENST00000596250 POLD1P28340 1107 aa17.74■□□□□ 0.43
SOX2-OT-225ENST00000596250 PIP4K2AP48426 406 aaPredicted RBP17.74■□□□□ 0.43
SOX2-OT-225ENST00000596250 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-225ENST00000596250 ARXQ96QS3 562 aa17.74■□□□□ 0.43
SOX2-OT-225ENST00000596250 C4AP0C0L4 1744 aa17.74■□□□□ 0.43
SOX2-OT-225ENST00000596250 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
SOX2-OT-225ENST00000596250 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
SOX2-OT-225ENST00000596250 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
SOX2-OT-225ENST00000596250 IL6STP40189 918 aaPredicted RBP17.72■□□□□ 0.43
SOX2-OT-225ENST00000596250 KRT24Q2M2I5 525 aa17.72■□□□□ 0.43
SOX2-OT-225ENST00000596250 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
SOX2-OT-225ENST00000596250 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
SOX2-OT-225ENST00000596250 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
SOX2-OT-225ENST00000596250 ZNF330Q9Y3S2 320 aaPredicted RBP17.71■□□□□ 0.43
SOX2-OT-225ENST00000596250 LAMB4A4D0S4 1761 aa17.71■□□□□ 0.43
SOX2-OT-225ENST00000596250 GNAI1P63096 354 aa17.7■□□□□ 0.42
SOX2-OT-225ENST00000596250 FKBP8Q14318 412 aa17.7■□□□□ 0.42
SOX2-OT-225ENST00000596250 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
SOX2-OT-225ENST00000596250 FHDC1Q9C0D6 1143 aaPredicted RBP17.7■□□□□ 0.42
SOX2-OT-225ENST00000596250 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
SOX2-OT-225ENST00000596250 ZPR1O75312 459 aa17.69■□□□□ 0.42
SOX2-OT-225ENST00000596250 MMP10P09238 476 aa17.69■□□□□ 0.42
SOX2-OT-225ENST00000596250 WDR63Q8IWG1 891 aa17.69■□□□□ 0.42
SOX2-OT-225ENST00000596250 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
SOX2-OT-225ENST00000596250 BCL2L12Q9HB09 334 aa17.69■□□□□ 0.42
SOX2-OT-225ENST00000596250 A0A087WZG4 1122 aa17.68■□□□□ 0.42
SOX2-OT-225ENST00000596250 GOLGA2Q08379 1002 aa17.67■□□□□ 0.42
SOX2-OT-225ENST00000596250 TBC1D2BQ9UPU7 963 aa17.67■□□□□ 0.42
SOX2-OT-225ENST00000596250 IL16Q14005 1332 aa17.67■□□□□ 0.42
SOX2-OT-225ENST00000596250 CAMTA2O94983 1202 aa17.66■□□□□ 0.42
SOX2-OT-225ENST00000596250 EIF2S2P20042 333 aaKnown RBP17.66■□□□□ 0.42
SOX2-OT-225ENST00000596250 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
SOX2-OT-225ENST00000596250 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
SOX2-OT-225ENST00000596250 SYT17Q9BSW7 474 aa17.66■□□□□ 0.42
SOX2-OT-225ENST00000596250 MYH16Q9H6N6 1097 aa17.66■□□□□ 0.42
SOX2-OT-225ENST00000596250 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
SOX2-OT-225ENST00000596250 DDR1Q08345 913 aa17.65■□□□□ 0.42
SOX2-OT-225ENST00000596250 PDIA6Q15084 440 aa17.65■□□□□ 0.42
SOX2-OT-225ENST00000596250 DZIP3Q86Y13 1208 aaKnown RBP17.65■□□□□ 0.42
SOX2-OT-225ENST00000596250 NECTIN2Q92692 538 aa17.65■□□□□ 0.42
SOX2-OT-225ENST00000596250 ERBB4Q15303 1308 aa17.65■□□□□ 0.42
SOX2-OT-225ENST00000596250 SCN7AQ01118 1682 aa17.64■□□□□ 0.42
SOX2-OT-225ENST00000596250 HOXB7P09629 217 aa17.64■□□□□ 0.41
SOX2-OT-225ENST00000596250 MYL6BP14649 208 aa17.64■□□□□ 0.41
SOX2-OT-225ENST00000596250 TM4SF1P30408 202 aa17.64■□□□□ 0.41
SOX2-OT-225ENST00000596250 PROSER3Q2NL68 480 aa17.64■□□□□ 0.41
SOX2-OT-225ENST00000596250 DUSP27Q5VZP5 1158 aa17.64■□□□□ 0.41
SOX2-OT-225ENST00000596250 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
SOX2-OT-225ENST00000596250 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
SOX2-OT-225ENST00000596250 KLHL34Q8N239 644 aa17.64■□□□□ 0.41
SOX2-OT-225ENST00000596250 NFIXQ14938 502 aa17.63■□□□□ 0.41
SOX2-OT-225ENST00000596250 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
SOX2-OT-225ENST00000596250 SPINK5Q9NQ38 1064 aaPredicted RBP17.63■□□□□ 0.41
SOX2-OT-225ENST00000596250 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
SOX2-OT-225ENST00000596250 E9PSI1 815 aa17.62■□□□□ 0.41
SOX2-OT-225ENST00000596250 POLRMTO00411 1230 aaKnown RBP17.62■□□□□ 0.41
SOX2-OT-225ENST00000596250 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
SOX2-OT-225ENST00000596250 ANXA1P04083 346 aa17.62■□□□□ 0.41
SOX2-OT-225ENST00000596250 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
SOX2-OT-225ENST00000596250 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
SOX2-OT-225ENST00000596250 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
SOX2-OT-225ENST00000596250 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms