RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 QSER1Q2KHR3 1735 aa25.13■■□□□ 1.61
PNKP-207ENST00000596014 GNPATO15228 680 aa25.13■■□□□ 1.61
PNKP-207ENST00000596014 CENPBP07199 599 aaPredicted RBP25.12■■□□□ 1.61
PNKP-207ENST00000596014 AMIGO3Q86WK7 504 aa25.12■■□□□ 1.61
PNKP-207ENST00000596014 CCDC87Q9NVE4 849 aa25.12■■□□□ 1.61
PNKP-207ENST00000596014 PNPLA7Q6ZV29 1317 aa25.12■■□□□ 1.61
PNKP-207ENST00000596014 PDGFDQ9GZP0 370 aaPredicted RBP25.11■■□□□ 1.61
PNKP-207ENST00000596014 RPS6KA4O75676 772 aa25.1■■□□□ 1.61
PNKP-207ENST00000596014 KRT24Q2M2I5 525 aa25.1■■□□□ 1.61
PNKP-207ENST00000596014 SMIM5Q71RC9 77 aa25.1■■□□□ 1.61
PNKP-207ENST00000596014 TSR2Q969E8 191 aaKnown RBP25.1■■□□□ 1.61
PNKP-207ENST00000596014 RTCBQ9Y3I0 505 aaKnown RBP25.1■■□□□ 1.61
PNKP-207ENST00000596014 SPINK5Q9NQ38 1064 aaPredicted RBP25.09■■□□□ 1.61
PNKP-207ENST00000596014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.08■■□□□ 1.61
PNKP-207ENST00000596014 A1BGP04217 495 aa25.08■■□□□ 1.61
PNKP-207ENST00000596014 SSFA2P28290 1259 aa25.08■■□□□ 1.61
PNKP-207ENST00000596014 FLAD1Q8NFF5 587 aa25.08■■□□□ 1.61
PNKP-207ENST00000596014 ZBTB1Q9Y2K1 713 aa25.08■■□□□ 1.61
PNKP-207ENST00000596014 LAMB4A4D0S4 1761 aa25.08■■□□□ 1.61
PNKP-207ENST00000596014 PHF14O94880 888 aa25.07■■□□□ 1.6
PNKP-207ENST00000596014 COL23A1Q86Y22 540 aaPredicted RBP25.07■■□□□ 1.6
PNKP-207ENST00000596014 HNRNPUQ00839 825 aaKnown RBP eCLIP25.07■■□□□ 1.6
PNKP-207ENST00000596014 CASZ1Q86V15 1759 aa25.06■■□□□ 1.6
PNKP-207ENST00000596014 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
PNKP-207ENST00000596014 GOLGA2Q08379 1002 aa25.05■■□□□ 1.6
PNKP-207ENST00000596014 TRAPPC3LQ5T215 181 aa25.05■■□□□ 1.6
PNKP-207ENST00000596014 FANCIQ9NVI1 1328 aa25.04■■□□□ 1.6
PNKP-207ENST00000596014 SOS1Q07889 1333 aaPredicted RBP25.04■■□□□ 1.6
PNKP-207ENST00000596014 ADRA2BP18089 450 aa25.04■■□□□ 1.6
PNKP-207ENST00000596014 DUSP27Q5VZP5 1158 aa25.04■■□□□ 1.6
PNKP-207ENST00000596014 C8orf58Q8NAV2 365 aa25.04■■□□□ 1.6
PNKP-207ENST00000596014 YTHDC1Q96MU7 727 aaKnown RBP25.04■■□□□ 1.6
PNKP-207ENST00000596014 MSH5O43196 834 aa25.03■■□□□ 1.6
PNKP-207ENST00000596014 EIF2S2P20042 333 aaKnown RBP25.03■■□□□ 1.6
PNKP-207ENST00000596014 ARHGEF1Q92888 912 aaKnown RBP25.03■■□□□ 1.6
PNKP-207ENST00000596014 MYH16Q9H6N6 1097 aa25.03■■□□□ 1.6
PNKP-207ENST00000596014 ELL2O00472 640 aaPredicted RBP25.02■■□□□ 1.6
PNKP-207ENST00000596014 HOXB7P09629 217 aa25.02■■□□□ 1.6
PNKP-207ENST00000596014 PIP4K2AP48426 406 aaPredicted RBP25.02■■□□□ 1.6
PNKP-207ENST00000596014 EIF5P55010 431 aaKnown RBP25.02■■□□□ 1.6
PNKP-207ENST00000596014 NBPF26B4DH59 902 aa25.01■■□□□ 1.59
PNKP-207ENST00000596014 IL6STP40189 918 aaPredicted RBP25.01■■□□□ 1.59
PNKP-207ENST00000596014 NBPF10Q6P3W6 841 aaKnown RBP25.01■■□□□ 1.59
PNKP-207ENST00000596014 NBPF15Q8N660 670 aa25.01■■□□□ 1.59
PNKP-207ENST00000596014 SLC16A10Q8TF71 515 aa25.01■■□□□ 1.59
PNKP-207ENST00000596014 TSPYL6Q8N831 410 aa25■■□□□ 1.59
PNKP-207ENST00000596014 C4AP0C0L4 1744 aa24.99■■□□□ 1.59
PNKP-207ENST00000596014 E9PSI1 815 aa24.99■■□□□ 1.59
PNKP-207ENST00000596014 ZBTB7AO95365 584 aa24.99■■□□□ 1.59
PNKP-207ENST00000596014 RFC4P35249 363 aa24.99■■□□□ 1.59
PNKP-207ENST00000596014 SLFN5Q08AF3 891 aa24.99■■□□□ 1.59
PNKP-207ENST00000596014 CDCA7LQ96GN5 454 aa24.99■■□□□ 1.59
PNKP-207ENST00000596014 COL15A1P39059 1388 aa24.99■■□□□ 1.59
PNKP-207ENST00000596014 SRCAPQ6ZRS2 3230 aa24.98■■□□□ 1.59
PNKP-207ENST00000596014 NECTIN2Q92692 538 aa24.98■■□□□ 1.59
PNKP-207ENST00000596014 ZNF330Q9Y3S2 320 aaPredicted RBP24.98■■□□□ 1.59
PNKP-207ENST00000596014 ERBB4Q15303 1308 aa24.98■■□□□ 1.59
PNKP-207ENST00000596014 EXOSC9Q06265 439 aaKnown RBP24.97■■□□□ 1.59
PNKP-207ENST00000596014 HDGFL1Q5TGJ6 251 aa24.97■■□□□ 1.59
PNKP-207ENST00000596014 MTFR1LQ9H019 292 aa24.97■■□□□ 1.59
PNKP-207ENST00000596014 PDIA6Q15084 440 aa24.96■■□□□ 1.59
PNKP-207ENST00000596014 NPM2Q86SE8 214 aaKnown RBP24.96■■□□□ 1.59
PNKP-207ENST00000596014 A0A087WZG4 1122 aa24.95■■□□□ 1.58
PNKP-207ENST00000596014 MYL6BP14649 208 aa24.95■■□□□ 1.58
PNKP-207ENST00000596014 TWISTNBQ3B726 338 aaPredicted RBP24.95■■□□□ 1.58
PNKP-207ENST00000596014 TRMT2AQ8IZ69 625 aaKnown RBP24.94■■□□□ 1.58
PNKP-207ENST00000596014 ATF5Q9Y2D1 282 aaPredicted RBP24.94■■□□□ 1.58
PNKP-207ENST00000596014 SRP68Q9UHB9 627 aaKnown RBP24.94■■□□□ 1.58
PNKP-207ENST00000596014 NARFQ9UHQ1 456 aa24.94■■□□□ 1.58
PNKP-207ENST00000596014 USP42Q9H9J4 1324 aaKnown RBP24.93■■□□□ 1.58
PNKP-207ENST00000596014 TBC1D2BQ9UPU7 963 aa24.93■■□□□ 1.58
PNKP-207ENST00000596014 ZBED9Q6R2W3 1325 aa24.93■■□□□ 1.58
PNKP-207ENST00000596014 ZPR1O75312 459 aa24.92■■□□□ 1.58
PNKP-207ENST00000596014 ANXA1P04083 346 aa24.92■■□□□ 1.58
PNKP-207ENST00000596014 PROSER3Q2NL68 480 aa24.92■■□□□ 1.58
PNKP-207ENST00000596014 ARXQ96QS3 562 aa24.92■■□□□ 1.58
PNKP-207ENST00000596014 SPON1Q9HCB6 807 aa24.92■■□□□ 1.58
PNKP-207ENST00000596014 DDX21Q9NR30 783 aaKnown RBP eCLIP24.92■■□□□ 1.58
PNKP-207ENST00000596014 CHPF2Q9P2E5 772 aa24.92■■□□□ 1.58
PNKP-207ENST00000596014 VAMP4O75379 141 aa24.91■■□□□ 1.58
PNKP-207ENST00000596014 GYS1P13807 737 aa24.91■■□□□ 1.58
PNKP-207ENST00000596014 LRP10Q7Z4F1 713 aa24.91■■□□□ 1.58
PNKP-207ENST00000596014 CHMP4AQ9BY43 222 aa24.91■■□□□ 1.58
PNKP-207ENST00000596014 COL24A1Q17RW2 1714 aa24.91■■□□□ 1.58
PNKP-207ENST00000596014 USPL1Q5W0Q7 1092 aa24.91■■□□□ 1.58
PNKP-207ENST00000596014 MSL1Q68DK7 614 aa24.91■■□□□ 1.58
PNKP-207ENST00000596014 DZIP3Q86Y13 1208 aaKnown RBP24.91■■□□□ 1.58
PNKP-207ENST00000596014 DBF4Q9UBU7 674 aaPredicted RBP24.91■■□□□ 1.58
PNKP-207ENST00000596014 CCDC30Q5VVM6 783 aa24.9■■□□□ 1.58
PNKP-207ENST00000596014 NLGN1Q8N2Q7 840 aa24.89■■□□□ 1.58
PNKP-207ENST00000596014 PTGER2P43116 358 aa24.88■■□□□ 1.57
PNKP-207ENST00000596014 BCL2L12Q9HB09 334 aa24.88■■□□□ 1.57
PNKP-207ENST00000596014 CAMTA2O94983 1202 aa24.87■■□□□ 1.57
PNKP-207ENST00000596014 FKBP8Q14318 412 aa24.87■■□□□ 1.57
PNKP-207ENST00000596014 TTLL7Q6ZT98 887 aa24.87■■□□□ 1.57
PNKP-207ENST00000596014 SGIP1Q9BQI5 828 aa24.87■■□□□ 1.57
PNKP-207ENST00000596014 HYPKQ9NX55 129 aa24.86■■□□□ 1.57
PNKP-207ENST00000596014 TCERG1O14776 1098 aaKnown RBP24.85■■□□□ 1.57
PNKP-207ENST00000596014 SCN7AQ01118 1682 aa24.85■■□□□ 1.57
PNKP-207ENST00000596014 BCORQ6W2J9 1755 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms