RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 UBR3Q6ZT12 1888 aa25.56■■□□□ 1.68
LSM4-203ENST00000593829 RPS6KA4O75676 772 aa25.56■■□□□ 1.68
LSM4-203ENST00000593829 INTS5Q6P9B9 1019 aaKnown RBP25.56■■□□□ 1.68
LSM4-203ENST00000593829 SLC16A10Q8TF71 515 aa25.56■■□□□ 1.68
LSM4-203ENST00000593829 LAS1LQ9Y4W2 734 aaKnown RBP25.56■■□□□ 1.68
LSM4-203ENST00000593829 CHL1O00533 1208 aa25.55■■□□□ 1.68
LSM4-203ENST00000593829 ZBTB7AO95365 584 aa25.55■■□□□ 1.68
LSM4-203ENST00000593829 EIF4A1P60842 406 aaKnown RBP25.55■■□□□ 1.68
LSM4-203ENST00000593829 SMIM5Q71RC9 77 aa25.55■■□□□ 1.68
LSM4-203ENST00000593829 CFAP44Q96MT7 982 aa25.54■■□□□ 1.68
LSM4-203ENST00000593829 MTFR1LQ9H019 292 aa25.54■■□□□ 1.68
LSM4-203ENST00000593829 SPON1Q9HCB6 807 aa25.54■■□□□ 1.68
LSM4-203ENST00000593829 MYH14Q7Z406 1995 aaKnown RBP25.54■■□□□ 1.68
LSM4-203ENST00000593829 TRAPPC3LQ5T215 181 aa25.53■■□□□ 1.68
LSM4-203ENST00000593829 WWC1Q8IX03 1113 aa25.53■■□□□ 1.68
LSM4-203ENST00000593829 ADRA2BP18089 450 aa25.53■■□□□ 1.68
LSM4-203ENST00000593829 PRAMEF22A3QJZ6 481 aa25.52■■□□□ 1.68
LSM4-203ENST00000593829 NGEFQ8N5V2 710 aa25.52■■□□□ 1.68
LSM4-203ENST00000593829 ANP32EQ9BTT0 268 aa25.51■■□□□ 1.67
LSM4-203ENST00000593829 IFT57Q9NWB7 429 aa25.51■■□□□ 1.67
LSM4-203ENST00000593829 ATF5Q9Y2D1 282 aaPredicted RBP25.51■■□□□ 1.67
LSM4-203ENST00000593829 ZBTB1Q9Y2K1 713 aa25.51■■□□□ 1.67
LSM4-203ENST00000593829 SALL2Q9Y467 1007 aaPredicted RBP25.51■■□□□ 1.67
LSM4-203ENST00000593829 USP16Q9Y5T5 823 aa25.51■■□□□ 1.67
LSM4-203ENST00000593829 GIGYF1O75420 1035 aaPredicted RBP25.51■■□□□ 1.67
LSM4-203ENST00000593829 GNAI1P63096 354 aa25.51■■□□□ 1.67
LSM4-203ENST00000593829 ZNF853P0CG23 659 aa25.5■■□□□ 1.67
LSM4-203ENST00000593829 ARHGEF1Q92888 912 aaKnown RBP25.49■■□□□ 1.67
LSM4-203ENST00000593829 SOS1Q07889 1333 aaPredicted RBP25.49■■□□□ 1.67
LSM4-203ENST00000593829 CANXP27824 592 aaKnown RBP25.49■■□□□ 1.67
LSM4-203ENST00000593829 LRP5O75197 1615 aa25.47■■□□□ 1.67
LSM4-203ENST00000593829 RFC4P35249 363 aa25.47■■□□□ 1.67
LSM4-203ENST00000593829 MBIPQ9NS73 344 aa25.47■■□□□ 1.67
LSM4-203ENST00000593829 A1BGP04217 495 aa25.47■■□□□ 1.67
LSM4-203ENST00000593829 SRCAPQ6ZRS2 3230 aa25.45■■□□□ 1.67
LSM4-203ENST00000593829 IL16Q14005 1332 aa25.45■■□□□ 1.66
LSM4-203ENST00000593829 WDR63Q8IWG1 891 aa25.45■■□□□ 1.66
LSM4-203ENST00000593829 PTGER2P43116 358 aa25.44■■□□□ 1.66
LSM4-203ENST00000593829 COL15A1P39059 1388 aa25.44■■□□□ 1.66
LSM4-203ENST00000593829 IL6STP40189 918 aaPredicted RBP25.43■■□□□ 1.66
LSM4-203ENST00000593829 EIF5P55010 431 aaKnown RBP25.43■■□□□ 1.66
LSM4-203ENST00000593829 FKBP8Q14318 412 aa25.43■■□□□ 1.66
LSM4-203ENST00000593829 MSL1Q68DK7 614 aa25.43■■□□□ 1.66
LSM4-203ENST00000593829 LAMB4A4D0S4 1761 aa25.42■■□□□ 1.66
LSM4-203ENST00000593829 NPM2Q86SE8 214 aaKnown RBP25.42■■□□□ 1.66
LSM4-203ENST00000593829 SGIP1Q9BQI5 828 aa25.42■■□□□ 1.66
LSM4-203ENST00000593829 POLD1P28340 1107 aa25.41■■□□□ 1.66
LSM4-203ENST00000593829 ZNF330Q9Y3S2 320 aaPredicted RBP25.41■■□□□ 1.66
LSM4-203ENST00000593829 A0A087WZG4 1122 aa25.41■■□□□ 1.66
LSM4-203ENST00000593829 KRT24Q2M2I5 525 aa25.41■■□□□ 1.66
LSM4-203ENST00000593829 ZPR1O75312 459 aa25.4■■□□□ 1.66
LSM4-203ENST00000593829 NEFLP07196 543 aa25.4■■□□□ 1.66
LSM4-203ENST00000593829 PIP4K2AP48426 406 aaPredicted RBP25.4■■□□□ 1.66
LSM4-203ENST00000593829 USP42Q9H9J4 1324 aaKnown RBP25.4■■□□□ 1.66
LSM4-203ENST00000593829 C4AP0C0L4 1744 aa25.4■■□□□ 1.66
LSM4-203ENST00000593829 NBPF26B4DH59 902 aa25.39■■□□□ 1.66
LSM4-203ENST00000593829 NBPF10Q6P3W6 841 aaKnown RBP25.39■■□□□ 1.66
LSM4-203ENST00000593829 NBPF15Q8N660 670 aa25.39■■□□□ 1.66
LSM4-203ENST00000593829 PPP1R1BQ9UD71 204 aaPredicted RBP25.39■■□□□ 1.66
LSM4-203ENST00000593829 SRP68Q9UHB9 627 aaKnown RBP25.39■■□□□ 1.65
LSM4-203ENST00000593829 COL24A1Q17RW2 1714 aa25.38■■□□□ 1.65
LSM4-203ENST00000593829 HOXB7P09629 217 aa25.38■■□□□ 1.65
LSM4-203ENST00000593829 GYS1P13807 737 aa25.38■■□□□ 1.65
LSM4-203ENST00000593829 EIF2S2P20042 333 aaKnown RBP25.38■■□□□ 1.65
LSM4-203ENST00000593829 NLGN1Q8N2Q7 840 aa25.38■■□□□ 1.65
LSM4-203ENST00000593829 NARFQ9UHQ1 456 aa25.38■■□□□ 1.65
LSM4-203ENST00000593829 TSR2Q969E8 191 aaKnown RBP25.37■■□□□ 1.65
LSM4-203ENST00000593829 DUSP27Q5VZP5 1158 aa25.37■■□□□ 1.65
LSM4-203ENST00000593829 ERBB4Q15303 1308 aa25.37■■□□□ 1.65
LSM4-203ENST00000593829 USPL1Q5W0Q7 1092 aa25.36■■□□□ 1.65
LSM4-203ENST00000593829 ZNF521Q96K83 1311 aa25.36■■□□□ 1.65
LSM4-203ENST00000593829 ARXQ96QS3 562 aa25.35■■□□□ 1.65
LSM4-203ENST00000593829 TBC1D2BQ9UPU7 963 aa25.35■■□□□ 1.65
LSM4-203ENST00000593829 C8orf58Q8NAV2 365 aa25.33■■□□□ 1.65
LSM4-203ENST00000593829 NECTIN2Q92692 538 aa25.33■■□□□ 1.65
LSM4-203ENST00000593829 HDGFL1Q5TGJ6 251 aa25.33■■□□□ 1.65
LSM4-203ENST00000593829 DZIP3Q86Y13 1208 aaKnown RBP25.33■■□□□ 1.65
LSM4-203ENST00000593829 FANCIQ9NVI1 1328 aa25.32■■□□□ 1.64
LSM4-203ENST00000593829 ELL2O00472 640 aaPredicted RBP25.32■■□□□ 1.64
LSM4-203ENST00000593829 MYL6BP14649 208 aa25.32■■□□□ 1.64
LSM4-203ENST00000593829 MYH16Q9H6N6 1097 aa25.32■■□□□ 1.64
LSM4-203ENST00000593829 MMP10P09238 476 aa25.31■■□□□ 1.64
LSM4-203ENST00000593829 SPINK5Q9NQ38 1064 aaPredicted RBP25.31■■□□□ 1.64
LSM4-203ENST00000593829 GOLGA2Q08379 1002 aa25.31■■□□□ 1.64
LSM4-203ENST00000593829 PDIA6Q15084 440 aa25.3■■□□□ 1.64
LSM4-203ENST00000593829 BCL2L12Q9HB09 334 aa25.3■■□□□ 1.64
LSM4-203ENST00000593829 CAMTA2O94983 1202 aa25.29■■□□□ 1.64
LSM4-203ENST00000593829 CHMP4AQ9BY43 222 aa25.29■■□□□ 1.64
LSM4-203ENST00000593829 TSPYL6Q8N831 410 aa25.28■■□□□ 1.64
LSM4-203ENST00000593829 DDX21Q9NR30 783 aaKnown RBP eCLIP25.28■■□□□ 1.64
LSM4-203ENST00000593829 PROSER3Q2NL68 480 aa25.27■■□□□ 1.64
LSM4-203ENST00000593829 ANXA1P04083 346 aa25.27■■□□□ 1.64
LSM4-203ENST00000593829 LRP10Q7Z4F1 713 aa25.27■■□□□ 1.64
LSM4-203ENST00000593829 CHPF2Q9P2E5 772 aa25.27■■□□□ 1.64
LSM4-203ENST00000593829 DBF4Q9UBU7 674 aaPredicted RBP25.27■■□□□ 1.64
LSM4-203ENST00000593829 TM4SF1P30408 202 aa25.26■■□□□ 1.63
LSM4-203ENST00000593829 FHDC1Q9C0D6 1143 aaPredicted RBP25.26■■□□□ 1.63
LSM4-203ENST00000593829 PARP3Q9Y6F1 533 aa25.26■■□□□ 1.63
LSM4-203ENST00000593829 SCN7AQ01118 1682 aa25.26■■□□□ 1.63
LSM4-203ENST00000593829 TWISTNBQ3B726 338 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms