RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 PRAMEF22A3QJZ6 481 aa19.43■□□□□ 0.7
DDX39A-221ENST00000593026 PHF14O94880 888 aa19.43■□□□□ 0.7
DDX39A-221ENST00000593026 RTCBQ9Y3I0 505 aaKnown RBP19.43■□□□□ 0.7
DDX39A-221ENST00000593026 CASZ1Q86V15 1759 aa19.42■□□□□ 0.7
DDX39A-221ENST00000593026 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-221ENST00000593026 RPS6KA4O75676 772 aa19.42■□□□□ 0.7
DDX39A-221ENST00000593026 SSFA2P28290 1259 aa19.42■□□□□ 0.7
DDX39A-221ENST00000593026 INTS5Q6P9B9 1019 aaKnown RBP19.42■□□□□ 0.7
DDX39A-221ENST00000593026 FLAD1Q8NFF5 587 aa19.42■□□□□ 0.7
DDX39A-221ENST00000593026 USP16Q9Y5T5 823 aa19.42■□□□□ 0.7
DDX39A-221ENST00000593026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.41■□□□□ 0.7
DDX39A-221ENST00000593026 AMIGO3Q86WK7 504 aa19.41■□□□□ 0.7
DDX39A-221ENST00000593026 PDGFDQ9GZP0 370 aaPredicted RBP19.41■□□□□ 0.7
DDX39A-221ENST00000593026 MSH5O43196 834 aa19.4■□□□□ 0.7
DDX39A-221ENST00000593026 ZBTB1Q9Y2K1 713 aa19.4■□□□□ 0.7
DDX39A-221ENST00000593026 ZNF521Q96K83 1311 aa19.4■□□□□ 0.7
DDX39A-221ENST00000593026 CANXP27824 592 aaKnown RBP19.39■□□□□ 0.69
DDX39A-221ENST00000593026 SMIM5Q71RC9 77 aa19.39■□□□□ 0.69
DDX39A-221ENST00000593026 COL23A1Q86Y22 540 aaPredicted RBP19.39■□□□□ 0.69
DDX39A-221ENST00000593026 TSR2Q969E8 191 aaKnown RBP19.39■□□□□ 0.69
DDX39A-221ENST00000593026 A1BGP04217 495 aa19.38■□□□□ 0.69
DDX39A-221ENST00000593026 ADRA2BP18089 450 aa19.38■□□□□ 0.69
DDX39A-221ENST00000593026 KRT24Q2M2I5 525 aa19.38■□□□□ 0.69
DDX39A-221ENST00000593026 TRAPPC3LQ5T215 181 aa19.38■□□□□ 0.69
DDX39A-221ENST00000593026 SRCAPQ6ZRS2 3230 aa19.38■□□□□ 0.69
DDX39A-221ENST00000593026 LRP5O75197 1615 aa19.37■□□□□ 0.69
DDX39A-221ENST00000593026 SOS1Q07889 1333 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-221ENST00000593026 HOXB7P09629 217 aa19.36■□□□□ 0.69
DDX39A-221ENST00000593026 HNRNPUQ00839 825 aaKnown RBP eCLIP19.36■□□□□ 0.69
DDX39A-221ENST00000593026 SLC16A10Q8TF71 515 aa19.36■□□□□ 0.69
DDX39A-221ENST00000593026 MYH16Q9H6N6 1097 aa19.36■□□□□ 0.69
DDX39A-221ENST00000593026 C4AP0C0L4 1744 aa19.36■□□□□ 0.69
DDX39A-221ENST00000593026 COL15A1P39059 1388 aa19.35■□□□□ 0.69
DDX39A-221ENST00000593026 FANCIQ9NVI1 1328 aa19.35■□□□□ 0.69
DDX39A-221ENST00000593026 ZBTB7AO95365 584 aa19.35■□□□□ 0.69
DDX39A-221ENST00000593026 RFC4P35249 363 aa19.35■□□□□ 0.69
DDX39A-221ENST00000593026 GOLGA2Q08379 1002 aa19.35■□□□□ 0.69
DDX39A-221ENST00000593026 DUSP27Q5VZP5 1158 aa19.35■□□□□ 0.69
DDX39A-221ENST00000593026 ARHGEF1Q92888 912 aaKnown RBP19.35■□□□□ 0.69
DDX39A-221ENST00000593026 ZNF330Q9Y3S2 320 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-221ENST00000593026 EIF2S2P20042 333 aaKnown RBP19.34■□□□□ 0.69
DDX39A-221ENST00000593026 IL6STP40189 918 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-221ENST00000593026 PIP4K2AP48426 406 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-221ENST00000593026 NPM2Q86SE8 214 aaKnown RBP19.34■□□□□ 0.69
DDX39A-221ENST00000593026 MTFR1LQ9H019 292 aa19.34■□□□□ 0.69
DDX39A-221ENST00000593026 SPINK5Q9NQ38 1064 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-221ENST00000593026 ERBB4Q15303 1308 aa19.33■□□□□ 0.69
DDX39A-221ENST00000593026 EIF5P55010 431 aaKnown RBP19.33■□□□□ 0.68
DDX39A-221ENST00000593026 NBPF26B4DH59 902 aa19.32■□□□□ 0.68
DDX39A-221ENST00000593026 ELL2O00472 640 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-221ENST00000593026 HDGFL1Q5TGJ6 251 aa19.32■□□□□ 0.68
DDX39A-221ENST00000593026 NBPF10Q6P3W6 841 aaKnown RBP19.32■□□□□ 0.68
DDX39A-221ENST00000593026 NBPF15Q8N660 670 aa19.32■□□□□ 0.68
DDX39A-221ENST00000593026 C8orf58Q8NAV2 365 aa19.32■□□□□ 0.68
DDX39A-221ENST00000593026 SPON1Q9HCB6 807 aa19.32■□□□□ 0.68
DDX39A-221ENST00000593026 ATF5Q9Y2D1 282 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-221ENST00000593026 A0A087WZG4 1122 aa19.31■□□□□ 0.68
DDX39A-221ENST00000593026 E9PSI1 815 aa19.31■□□□□ 0.68
DDX39A-221ENST00000593026 NECTIN2Q92692 538 aa19.31■□□□□ 0.68
DDX39A-221ENST00000593026 USP42Q9H9J4 1324 aaKnown RBP19.3■□□□□ 0.68
DDX39A-221ENST00000593026 MYL6BP14649 208 aa19.3■□□□□ 0.68
DDX39A-221ENST00000593026 TSPYL6Q8N831 410 aa19.3■□□□□ 0.68
DDX39A-221ENST00000593026 ZPR1O75312 459 aa19.29■□□□□ 0.68
DDX39A-221ENST00000593026 MSL1Q68DK7 614 aa19.29■□□□□ 0.68
DDX39A-221ENST00000593026 ARXQ96QS3 562 aa19.29■□□□□ 0.68
DDX39A-221ENST00000593026 SRP68Q9UHB9 627 aaKnown RBP19.29■□□□□ 0.68
DDX39A-221ENST00000593026 NARFQ9UHQ1 456 aa19.29■□□□□ 0.68
DDX39A-221ENST00000593026 EXOSC9Q06265 439 aaKnown RBP19.28■□□□□ 0.68
DDX39A-221ENST00000593026 SLFN5Q08AF3 891 aa19.28■□□□□ 0.68
DDX39A-221ENST00000593026 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
DDX39A-221ENST00000593026 DZIP3Q86Y13 1208 aaKnown RBP19.28■□□□□ 0.68
DDX39A-221ENST00000593026 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
DDX39A-221ENST00000593026 GYS1P13807 737 aa19.27■□□□□ 0.68
DDX39A-221ENST00000593026 PDIA6Q15084 440 aa19.27■□□□□ 0.68
DDX39A-221ENST00000593026 USPL1Q5W0Q7 1092 aa19.27■□□□□ 0.68
DDX39A-221ENST00000593026 CDCA7LQ96GN5 454 aa19.27■□□□□ 0.68
DDX39A-221ENST00000593026 DDX21Q9NR30 783 aaKnown RBP eCLIP19.27■□□□□ 0.68
DDX39A-221ENST00000593026 CHPF2Q9P2E5 772 aa19.27■□□□□ 0.68
DDX39A-221ENST00000593026 TBC1D2BQ9UPU7 963 aa19.27■□□□□ 0.68
DDX39A-221ENST00000593026 COL24A1Q17RW2 1714 aa19.27■□□□□ 0.68
DDX39A-221ENST00000593026 SCN7AQ01118 1682 aa19.27■□□□□ 0.67
DDX39A-221ENST00000593026 POLD1P28340 1107 aa19.26■□□□□ 0.67
DDX39A-221ENST00000593026 PROSER3Q2NL68 480 aa19.26■□□□□ 0.67
DDX39A-221ENST00000593026 NLGN1Q8N2Q7 840 aa19.26■□□□□ 0.67
DDX39A-221ENST00000593026 DBF4Q9UBU7 674 aaPredicted RBP19.26■□□□□ 0.67
DDX39A-221ENST00000593026 ANXA1P04083 346 aa19.25■□□□□ 0.67
DDX39A-221ENST00000593026 PTGER2P43116 358 aa19.25■□□□□ 0.67
DDX39A-221ENST00000593026 CCDC30Q5VVM6 783 aa19.25■□□□□ 0.67
DDX39A-221ENST00000593026 ZBED9Q6R2W3 1325 aa19.25■□□□□ 0.67
DDX39A-221ENST00000593026 BCORQ6W2J9 1755 aa19.24■□□□□ 0.67
DDX39A-221ENST00000593026 LRP10Q7Z4F1 713 aa19.24■□□□□ 0.67
DDX39A-221ENST00000593026 SGIP1Q9BQI5 828 aa19.24■□□□□ 0.67
DDX39A-221ENST00000593026 PPP1R1BQ9UD71 204 aaPredicted RBP19.24■□□□□ 0.67
DDX39A-221ENST00000593026 CAMTA2O94983 1202 aa19.23■□□□□ 0.67
DDX39A-221ENST00000593026 FKBP8Q14318 412 aa19.23■□□□□ 0.67
DDX39A-221ENST00000593026 KIF6Q6ZMV9 814 aa19.23■□□□□ 0.67
DDX39A-221ENST00000593026 BCL2L12Q9HB09 334 aa19.23■□□□□ 0.67
DDX39A-221ENST00000593026 VAMP4O75379 141 aa19.22■□□□□ 0.67
DDX39A-221ENST00000593026 TRMT2AQ8IZ69 625 aaKnown RBP19.22■□□□□ 0.67
DDX39A-221ENST00000593026 STK31Q9BXU1 1019 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms