RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 ZBTB1Q9Y2K1 713 aa20.12■□□□□ 0.81
TRIM47-206ENST00000592942 COL24A1Q17RW2 1714 aa20.12■□□□□ 0.81
TRIM47-206ENST00000592942 CHL1O00533 1208 aa20.11■□□□□ 0.81
TRIM47-206ENST00000592942 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
TRIM47-206ENST00000592942 ADRA2BP18089 450 aa20.11■□□□□ 0.81
TRIM47-206ENST00000592942 BABAM1Q9NWV8 329 aa20.11■□□□□ 0.81
TRIM47-206ENST00000592942 SOS1Q07889 1333 aaPredicted RBP20.1■□□□□ 0.81
TRIM47-206ENST00000592942 SENP3-EIF4A1A0A087X0R7 540 aa20.1■□□□□ 0.81
TRIM47-206ENST00000592942 STARD3NLO95772 234 aa20.1■□□□□ 0.81
TRIM47-206ENST00000592942 A1BGP04217 495 aa20.1■□□□□ 0.81
TRIM47-206ENST00000592942 KDM3BQ7LBC6 1761 aa20.09■□□□□ 0.81
TRIM47-206ENST00000592942 GIGYF1O75420 1035 aaPredicted RBP20.09■□□□□ 0.81
TRIM47-206ENST00000592942 MSL1Q68DK7 614 aa20.09■□□□□ 0.81
TRIM47-206ENST00000592942 FAM9BQ8IZU0 186 aa20.09■□□□□ 0.81
TRIM47-206ENST00000592942 YY1P25490 414 aa20.08■□□□□ 0.81
TRIM47-206ENST00000592942 EIF5P55010 431 aaKnown RBP20.08■□□□□ 0.81
TRIM47-206ENST00000592942 TSPYL4Q9UJ04 414 aa20.08■□□□□ 0.81
TRIM47-206ENST00000592942 ZNF853P0CG23 659 aa20.07■□□□□ 0.8
TRIM47-206ENST00000592942 CANXP27824 592 aaKnown RBP20.07■□□□□ 0.8
TRIM47-206ENST00000592942 DIEXFQ68CQ4 756 aaKnown RBP20.07■□□□□ 0.8
TRIM47-206ENST00000592942 GYS1P13807 737 aa20.06■□□□□ 0.8
TRIM47-206ENST00000592942 RFC4P35249 363 aa20.06■□□□□ 0.8
TRIM47-206ENST00000592942 CCDC27Q2M243 656 aa20.06■□□□□ 0.8
TRIM47-206ENST00000592942 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
TRIM47-206ENST00000592942 SRP68Q9UHB9 627 aaKnown RBP20.06■□□□□ 0.8
TRIM47-206ENST00000592942 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
TRIM47-206ENST00000592942 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
TRIM47-206ENST00000592942 ARXQ96QS3 562 aa20.05■□□□□ 0.8
TRIM47-206ENST00000592942 NBPF26B4DH59 902 aa20.04■□□□□ 0.8
TRIM47-206ENST00000592942 PIP4K2AP48426 406 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-206ENST00000592942 NBPF10Q6P3W6 841 aaKnown RBP20.04■□□□□ 0.8
TRIM47-206ENST00000592942 WWC1Q8IX03 1113 aa20.04■□□□□ 0.8
TRIM47-206ENST00000592942 NBPF15Q8N660 670 aa20.04■□□□□ 0.8
TRIM47-206ENST00000592942 USP42Q9H9J4 1324 aaKnown RBP20.03■□□□□ 0.8
TRIM47-206ENST00000592942 IL6STP40189 918 aaPredicted RBP20.03■□□□□ 0.8
TRIM47-206ENST00000592942 MIER1Q8N108 512 aa20.03■□□□□ 0.8
TRIM47-206ENST00000592942 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
TRIM47-206ENST00000592942 PPP1R1BQ9UD71 204 aaPredicted RBP20.03■□□□□ 0.8
TRIM47-206ENST00000592942 LAS1LQ9Y4W2 734 aaKnown RBP20.03■□□□□ 0.8
TRIM47-206ENST00000592942 C4AP0C0L4 1744 aa20.02■□□□□ 0.8
TRIM47-206ENST00000592942 POLD1P28340 1107 aa20.02■□□□□ 0.8
TRIM47-206ENST00000592942 KRT24Q2M2I5 525 aa20.02■□□□□ 0.8
TRIM47-206ENST00000592942 NLGN1Q8N2Q7 840 aa20.02■□□□□ 0.8
TRIM47-206ENST00000592942 NARFQ9UHQ1 456 aa20.02■□□□□ 0.8
TRIM47-206ENST00000592942 COL15A1P39059 1388 aa20.02■□□□□ 0.8
TRIM47-206ENST00000592942 FKBP8Q14318 412 aa20.01■□□□□ 0.79
TRIM47-206ENST00000592942 SYT17Q9BSW7 474 aa20.01■□□□□ 0.79
TRIM47-206ENST00000592942 FHDC1Q9C0D6 1143 aaPredicted RBP20.01■□□□□ 0.79
TRIM47-206ENST00000592942 MBIPQ9NS73 344 aa20.01■□□□□ 0.79
TRIM47-206ENST00000592942 USPL1Q5W0Q7 1092 aa20■□□□□ 0.79
TRIM47-206ENST00000592942 IFT57Q9NWB7 429 aa20■□□□□ 0.79
TRIM47-206ENST00000592942 TM4SF1P30408 202 aa19.99■□□□□ 0.79
TRIM47-206ENST00000592942 SALL2Q9Y467 1007 aaPredicted RBP19.99■□□□□ 0.79
TRIM47-206ENST00000592942 DCAF8L1A6NGE4 600 aa19.98■□□□□ 0.79
TRIM47-206ENST00000592942 ZPR1O75312 459 aa19.98■□□□□ 0.79
TRIM47-206ENST00000592942 MMP10P09238 476 aa19.98■□□□□ 0.79
TRIM47-206ENST00000592942 GNAI1P63096 354 aa19.98■□□□□ 0.79
TRIM47-206ENST00000592942 TBC1D2BQ9UPU7 963 aa19.98■□□□□ 0.79
TRIM47-206ENST00000592942 A0A087WZG4 1122 aa19.97■□□□□ 0.79
TRIM47-206ENST00000592942 CALD1Q05682 793 aaKnown RBP19.97■□□□□ 0.79
TRIM47-206ENST00000592942 PDIA6Q15084 440 aa19.97■□□□□ 0.79
TRIM47-206ENST00000592942 LRP10Q7Z4F1 713 aa19.96■□□□□ 0.79
TRIM47-206ENST00000592942 CAMTA2O94983 1202 aa19.95■□□□□ 0.78
TRIM47-206ENST00000592942 DDR1Q08345 913 aa19.95■□□□□ 0.78
TRIM47-206ENST00000592942 ZNF330Q9Y3S2 320 aaPredicted RBP19.95■□□□□ 0.78
TRIM47-206ENST00000592942 LAMB4A4D0S4 1761 aa19.94■□□□□ 0.78
TRIM47-206ENST00000592942 EIF2S2P20042 333 aaKnown RBP19.94■□□□□ 0.78
TRIM47-206ENST00000592942 WDR63Q8IWG1 891 aa19.94■□□□□ 0.78
TRIM47-206ENST00000592942 IL16Q14005 1332 aa19.94■□□□□ 0.78
TRIM47-206ENST00000592942 NFIXQ14938 502 aa19.93■□□□□ 0.78
TRIM47-206ENST00000592942 PROSER3Q2NL68 480 aa19.93■□□□□ 0.78
TRIM47-206ENST00000592942 DUSP27Q5VZP5 1158 aa19.93■□□□□ 0.78
TRIM47-206ENST00000592942 DZIP3Q86Y13 1208 aaKnown RBP19.93■□□□□ 0.78
TRIM47-206ENST00000592942 C8orf58Q8NAV2 365 aa19.93■□□□□ 0.78
TRIM47-206ENST00000592942 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
TRIM47-206ENST00000592942 POLRMTO00411 1230 aaKnown RBP19.92■□□□□ 0.78
TRIM47-206ENST00000592942 HOXB7P09629 217 aa19.92■□□□□ 0.78
TRIM47-206ENST00000592942 NGEFQ8N5V2 710 aa19.92■□□□□ 0.78
TRIM47-206ENST00000592942 NLGN2Q8NFZ4 835 aa19.92■□□□□ 0.78
TRIM47-206ENST00000592942 TSR2Q969E8 191 aaKnown RBP19.92■□□□□ 0.78
TRIM47-206ENST00000592942 CD2APQ9Y5K6 639 aa19.92■□□□□ 0.78
TRIM47-206ENST00000592942 ERBB4Q15303 1308 aa19.92■□□□□ 0.78
TRIM47-206ENST00000592942 ANXA1P04083 346 aa19.91■□□□□ 0.78
TRIM47-206ENST00000592942 MYL6BP14649 208 aa19.91■□□□□ 0.78
TRIM47-206ENST00000592942 TBC1D9BQ66K14 1250 aa19.91■□□□□ 0.78
TRIM47-206ENST00000592942 TTLL7Q6ZT98 887 aa19.91■□□□□ 0.78
TRIM47-206ENST00000592942 NECTIN2Q92692 538 aa19.91■□□□□ 0.78
TRIM47-206ENST00000592942 ZNF521Q96K83 1311 aa19.91■□□□□ 0.78
TRIM47-206ENST00000592942 TSPYL6Q8N831 410 aa19.9■□□□□ 0.78
TRIM47-206ENST00000592942 PARP3Q9Y6F1 533 aa19.9■□□□□ 0.78
TRIM47-206ENST00000592942 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.77
TRIM47-206ENST00000592942 HLFQ16534 295 aa19.89■□□□□ 0.77
TRIM47-206ENST00000592942 KLHL34Q8N239 644 aa19.89■□□□□ 0.77
TRIM47-206ENST00000592942 CLEC4GQ6UXB4 293 aa19.88■□□□□ 0.77
TRIM47-206ENST00000592942 NPM2Q86SE8 214 aaKnown RBP19.88■□□□□ 0.77
TRIM47-206ENST00000592942 DDX21Q9NR30 783 aaKnown RBP eCLIP19.88■□□□□ 0.77
TRIM47-206ENST00000592942 RGL2O15211 777 aa19.87■□□□□ 0.77
TRIM47-206ENST00000592942 HDGFL1Q5TGJ6 251 aa19.87■□□□□ 0.77
TRIM47-206ENST00000592942 ERVV-1B6SEH8 477 aa19.86■□□□□ 0.77
TRIM47-206ENST00000592942 SERPINB2P05120 415 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms