RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 IL16Q14005 1332 aa12.96□□□□□ -0.33
TPM4-216ENST00000592822 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.33
TPM4-216ENST00000592822 GNPATO15228 680 aa12.96□□□□□ -0.33
TPM4-216ENST00000592822 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
TPM4-216ENST00000592822 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
TPM4-216ENST00000592822 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.33
TPM4-216ENST00000592822 USP16Q9Y5T5 823 aa12.96□□□□□ -0.33
TPM4-216ENST00000592822 LAMB4A4D0S4 1761 aa12.96□□□□□ -0.34
TPM4-216ENST00000592822 STARD3NLO95772 234 aa12.95□□□□□ -0.34
TPM4-216ENST00000592822 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
TPM4-216ENST00000592822 RPS6KA4O75676 772 aa12.94□□□□□ -0.34
TPM4-216ENST00000592822 A1BGP04217 495 aa12.94□□□□□ -0.34
TPM4-216ENST00000592822 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
TPM4-216ENST00000592822 TSR2Q969E8 191 aaKnown RBP12.94□□□□□ -0.34
TPM4-216ENST00000592822 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
TPM4-216ENST00000592822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.93□□□□□ -0.34
TPM4-216ENST00000592822 PHF14O94880 888 aa12.93□□□□□ -0.34
TPM4-216ENST00000592822 ZBTB1Q9Y2K1 713 aa12.93□□□□□ -0.34
TPM4-216ENST00000592822 RTCBQ9Y3I0 505 aaKnown RBP12.93□□□□□ -0.34
TPM4-216ENST00000592822 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
TPM4-216ENST00000592822 C4AP0C0L4 1744 aa12.92□□□□□ -0.34
TPM4-216ENST00000592822 CANXP27824 592 aaKnown RBP12.92□□□□□ -0.34
TPM4-216ENST00000592822 SSFA2P28290 1259 aa12.92□□□□□ -0.34
TPM4-216ENST00000592822 C8orf58Q8NAV2 365 aa12.92□□□□□ -0.34
TPM4-216ENST00000592822 FLAD1Q8NFF5 587 aa12.92□□□□□ -0.34
TPM4-216ENST00000592822 FANCIQ9NVI1 1328 aa12.91□□□□□ -0.34
TPM4-216ENST00000592822 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
TPM4-216ENST00000592822 PIP4K2AP48426 406 aaPredicted RBP12.91□□□□□ -0.34
TPM4-216ENST00000592822 DUSP27Q5VZP5 1158 aa12.91□□□□□ -0.34
TPM4-216ENST00000592822 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
TPM4-216ENST00000592822 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
TPM4-216ENST00000592822 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
TPM4-216ENST00000592822 MSH5O43196 834 aa12.9□□□□□ -0.34
TPM4-216ENST00000592822 ADRA2BP18089 450 aa12.9□□□□□ -0.34
TPM4-216ENST00000592822 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.34
TPM4-216ENST00000592822 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
TPM4-216ENST00000592822 GOLGA2Q08379 1002 aa12.9□□□□□ -0.34
TPM4-216ENST00000592822 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
TPM4-216ENST00000592822 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
TPM4-216ENST00000592822 ZBTB7AO95365 584 aa12.89□□□□□ -0.35
TPM4-216ENST00000592822 HOXB7P09629 217 aa12.89□□□□□ -0.35
TPM4-216ENST00000592822 EIF2S2P20042 333 aaKnown RBP12.89□□□□□ -0.35
TPM4-216ENST00000592822 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
TPM4-216ENST00000592822 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
TPM4-216ENST00000592822 CDCA7LQ96GN5 454 aa12.89□□□□□ -0.35
TPM4-216ENST00000592822 COL15A1P39059 1388 aa12.89□□□□□ -0.35
TPM4-216ENST00000592822 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
TPM4-216ENST00000592822 RFC4P35249 363 aa12.88□□□□□ -0.35
TPM4-216ENST00000592822 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
TPM4-216ENST00000592822 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
TPM4-216ENST00000592822 PDIA6Q15084 440 aa12.88□□□□□ -0.35
TPM4-216ENST00000592822 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
TPM4-216ENST00000592822 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
TPM4-216ENST00000592822 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
TPM4-216ENST00000592822 E9PSI1 815 aa12.87□□□□□ -0.35
TPM4-216ENST00000592822 TRMT2AQ8IZ69 625 aaKnown RBP12.87□□□□□ -0.35
TPM4-216ENST00000592822 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
TPM4-216ENST00000592822 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
TPM4-216ENST00000592822 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
TPM4-216ENST00000592822 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
TPM4-216ENST00000592822 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
TPM4-216ENST00000592822 PROSER3Q2NL68 480 aa12.86□□□□□ -0.35
TPM4-216ENST00000592822 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
TPM4-216ENST00000592822 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
TPM4-216ENST00000592822 LRP10Q7Z4F1 713 aa12.86□□□□□ -0.35
TPM4-216ENST00000592822 NARFQ9UHQ1 456 aa12.86□□□□□ -0.35
TPM4-216ENST00000592822 ZNF330Q9Y3S2 320 aaPredicted RBP12.86□□□□□ -0.35
TPM4-216ENST00000592822 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
TPM4-216ENST00000592822 A0A087WZG4 1122 aa12.85□□□□□ -0.35
TPM4-216ENST00000592822 ANXA1P04083 346 aa12.85□□□□□ -0.35
TPM4-216ENST00000592822 GYS1P13807 737 aa12.85□□□□□ -0.35
TPM4-216ENST00000592822 MYL6BP14649 208 aa12.85□□□□□ -0.35
TPM4-216ENST00000592822 MSL1Q68DK7 614 aa12.85□□□□□ -0.35
TPM4-216ENST00000592822 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
TPM4-216ENST00000592822 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM4-216ENST00000592822 CHPF2Q9P2E5 772 aa12.85□□□□□ -0.35
TPM4-216ENST00000592822 TBC1D2BQ9UPU7 963 aa12.85□□□□□ -0.35
TPM4-216ENST00000592822 SCN7AQ01118 1682 aa12.84□□□□□ -0.35
TPM4-216ENST00000592822 VAMP4O75379 141 aa12.84□□□□□ -0.35
TPM4-216ENST00000592822 PTGER2P43116 358 aa12.84□□□□□ -0.35
TPM4-216ENST00000592822 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
TPM4-216ENST00000592822 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
TPM4-216ENST00000592822 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
TPM4-216ENST00000592822 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
TPM4-216ENST00000592822 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
TPM4-216ENST00000592822 LRP5O75197 1615 aa12.84□□□□□ -0.35
TPM4-216ENST00000592822 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
TPM4-216ENST00000592822 ZPR1O75312 459 aa12.83□□□□□ -0.36
TPM4-216ENST00000592822 CAMTA2O94983 1202 aa12.83□□□□□ -0.36
TPM4-216ENST00000592822 FKBP8Q14318 412 aa12.83□□□□□ -0.36
TPM4-216ENST00000592822 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.36
TPM4-216ENST00000592822 ARXQ96QS3 562 aa12.83□□□□□ -0.36
TPM4-216ENST00000592822 DBF4Q9UBU7 674 aaPredicted RBP12.83□□□□□ -0.36
TPM4-216ENST00000592822 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
TPM4-216ENST00000592822 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
TPM4-216ENST00000592822 NLGN1Q8N2Q7 840 aa12.82□□□□□ -0.36
TPM4-216ENST00000592822 TCERG1O14776 1098 aaKnown RBP12.81□□□□□ -0.36
TPM4-216ENST00000592822 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
TPM4-216ENST00000592822 XAGE3Q8WTP9 111 aa12.81□□□□□ -0.36
TPM4-216ENST00000592822 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms