RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
DDX39A-218ENST00000592632 PRAMEF22A3QJZ6 481 aa17.07■□□□□ 0.32
DDX39A-218ENST00000592632 STARD3NLO95772 234 aa17.07■□□□□ 0.32
DDX39A-218ENST00000592632 ADRA2BP18089 450 aa17.07■□□□□ 0.32
DDX39A-218ENST00000592632 ARXQ96QS3 562 aa17.07■□□□□ 0.32
DDX39A-218ENST00000592632 SYT17Q9BSW7 474 aa17.07■□□□□ 0.32
DDX39A-218ENST00000592632 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
DDX39A-218ENST00000592632 MSL1Q68DK7 614 aa17.06■□□□□ 0.32
DDX39A-218ENST00000592632 ZBTB1Q9Y2K1 713 aa17.06■□□□□ 0.32
DDX39A-218ENST00000592632 COL24A1Q17RW2 1714 aa17.06■□□□□ 0.32
DDX39A-218ENST00000592632 SOS1Q07889 1333 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-218ENST00000592632 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
DDX39A-218ENST00000592632 EIF4A1P60842 406 aaKnown RBP17.05■□□□□ 0.32
DDX39A-218ENST00000592632 BABAM1Q9NWV8 329 aa17.05■□□□□ 0.32
DDX39A-218ENST00000592632 CHL1O00533 1208 aa17.04■□□□□ 0.32
DDX39A-218ENST00000592632 A1BGP04217 495 aa17.04■□□□□ 0.32
DDX39A-218ENST00000592632 RFC4P35249 363 aa17.04■□□□□ 0.32
DDX39A-218ENST00000592632 KDM3BQ7LBC6 1761 aa17.03■□□□□ 0.32
DDX39A-218ENST00000592632 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
DDX39A-218ENST00000592632 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-218ENST00000592632 CANXP27824 592 aaKnown RBP17.03■□□□□ 0.32
DDX39A-218ENST00000592632 POLD1P28340 1107 aa17.03■□□□□ 0.32
DDX39A-218ENST00000592632 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
DDX39A-218ENST00000592632 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
DDX39A-218ENST00000592632 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
DDX39A-218ENST00000592632 GYS1P13807 737 aa17.02■□□□□ 0.32
DDX39A-218ENST00000592632 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
DDX39A-218ENST00000592632 SRP68Q9UHB9 627 aaKnown RBP17.02■□□□□ 0.32
DDX39A-218ENST00000592632 ZNF853P0CG23 659 aa17■□□□□ 0.31
DDX39A-218ENST00000592632 NLGN1Q8N2Q7 840 aa17■□□□□ 0.31
DDX39A-218ENST00000592632 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
DDX39A-218ENST00000592632 USP42Q9H9J4 1324 aaKnown RBP16.99■□□□□ 0.31
DDX39A-218ENST00000592632 NBPF26B4DH59 902 aa16.99■□□□□ 0.31
DDX39A-218ENST00000592632 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-218ENST00000592632 PIP4K2AP48426 406 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-218ENST00000592632 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
DDX39A-218ENST00000592632 DIEXFQ68CQ4 756 aaKnown RBP16.99■□□□□ 0.31
DDX39A-218ENST00000592632 NBPF10Q6P3W6 841 aaKnown RBP16.99■□□□□ 0.31
DDX39A-218ENST00000592632 NBPF15Q8N660 670 aa16.99■□□□□ 0.31
DDX39A-218ENST00000592632 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
DDX39A-218ENST00000592632 NARFQ9UHQ1 456 aa16.99■□□□□ 0.31
DDX39A-218ENST00000592632 FKBP8Q14318 412 aa16.98■□□□□ 0.31
DDX39A-218ENST00000592632 CCDC27Q2M243 656 aa16.98■□□□□ 0.31
DDX39A-218ENST00000592632 COL15A1P39059 1388 aa16.98■□□□□ 0.31
DDX39A-218ENST00000592632 C4AP0C0L4 1744 aa16.98■□□□□ 0.31
DDX39A-218ENST00000592632 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
DDX39A-218ENST00000592632 ZPR1O75312 459 aa16.97■□□□□ 0.31
DDX39A-218ENST00000592632 MMP10P09238 476 aa16.97■□□□□ 0.31
DDX39A-218ENST00000592632 USPL1Q5W0Q7 1092 aa16.97■□□□□ 0.31
DDX39A-218ENST00000592632 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
DDX39A-218ENST00000592632 BCL2L12Q9HB09 334 aa16.97■□□□□ 0.31
DDX39A-218ENST00000592632 A0A087WZG4 1122 aa16.96■□□□□ 0.31
DDX39A-218ENST00000592632 GPR162Q16538 588 aa16.96■□□□□ 0.31
DDX39A-218ENST00000592632 KRT24Q2M2I5 525 aa16.96■□□□□ 0.31
DDX39A-218ENST00000592632 PELP1Q8IZL8 1130 aaKnown RBP16.96■□□□□ 0.31
DDX39A-218ENST00000592632 ZNF784Q8NCA9 323 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-218ENST00000592632 IFT57Q9NWB7 429 aa16.96■□□□□ 0.31
DDX39A-218ENST00000592632 TBC1D2BQ9UPU7 963 aa16.96■□□□□ 0.31
DDX39A-218ENST00000592632 TM4SF1P30408 202 aa16.95■□□□□ 0.3
DDX39A-218ENST00000592632 CALD1Q05682 793 aaKnown RBP16.95■□□□□ 0.3
DDX39A-218ENST00000592632 MBIPQ9NS73 344 aa16.95■□□□□ 0.3
DDX39A-218ENST00000592632 GNAI1P63096 354 aa16.94■□□□□ 0.3
DDX39A-218ENST00000592632 MIER1Q8N108 512 aa16.94■□□□□ 0.3
DDX39A-218ENST00000592632 ZNF330Q9Y3S2 320 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-218ENST00000592632 SALL2Q9Y467 1007 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-218ENST00000592632 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
DDX39A-218ENST00000592632 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
DDX39A-218ENST00000592632 DDR1Q08345 913 aa16.92■□□□□ 0.3
DDX39A-218ENST00000592632 NFIXQ14938 502 aa16.91■□□□□ 0.3
DDX39A-218ENST00000592632 PDIA6Q15084 440 aa16.91■□□□□ 0.3
DDX39A-218ENST00000592632 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
DDX39A-218ENST00000592632 DZIP3Q86Y13 1208 aaKnown RBP16.91■□□□□ 0.3
DDX39A-218ENST00000592632 NLGN2Q8NFZ4 835 aa16.91■□□□□ 0.3
DDX39A-218ENST00000592632 CD2APQ9Y5K6 639 aa16.91■□□□□ 0.3
DDX39A-218ENST00000592632 PARP3Q9Y6F1 533 aa16.91■□□□□ 0.3
DDX39A-218ENST00000592632 LAMB4A4D0S4 1761 aa16.9■□□□□ 0.3
DDX39A-218ENST00000592632 DUSP27Q5VZP5 1158 aa16.9■□□□□ 0.3
DDX39A-218ENST00000592632 LRP10Q7Z4F1 713 aa16.9■□□□□ 0.3
DDX39A-218ENST00000592632 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
DDX39A-218ENST00000592632 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
DDX39A-218ENST00000592632 IL16Q14005 1332 aa16.9■□□□□ 0.3
DDX39A-218ENST00000592632 POLRMTO00411 1230 aaKnown RBP16.89■□□□□ 0.29
DDX39A-218ENST00000592632 MYL6BP14649 208 aa16.89■□□□□ 0.29
DDX39A-218ENST00000592632 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
DDX39A-218ENST00000592632 C8orf58Q8NAV2 365 aa16.89■□□□□ 0.29
DDX39A-218ENST00000592632 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
DDX39A-218ENST00000592632 ERBB4Q15303 1308 aa16.89■□□□□ 0.29
DDX39A-218ENST00000592632 ANXA1P04083 346 aa16.88■□□□□ 0.29
DDX39A-218ENST00000592632 HOXB7P09629 217 aa16.88■□□□□ 0.29
DDX39A-218ENST00000592632 TBC1D9BQ66K14 1250 aa16.88■□□□□ 0.29
DDX39A-218ENST00000592632 TTLL7Q6ZT98 887 aa16.88■□□□□ 0.29
DDX39A-218ENST00000592632 TSR2Q969E8 191 aaKnown RBP16.88■□□□□ 0.29
DDX39A-218ENST00000592632 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
DDX39A-218ENST00000592632 CLEC4GQ6UXB4 293 aa16.87■□□□□ 0.29
DDX39A-218ENST00000592632 BICDL1Q6ZP65 573 aa16.87■□□□□ 0.29
DDX39A-218ENST00000592632 SERPINB2P05120 415 aa16.86■□□□□ 0.29
DDX39A-218ENST00000592632 HLFQ16534 295 aa16.86■□□□□ 0.29
DDX39A-218ENST00000592632 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-218ENST00000592632 ERVV-1B6SEH8 477 aa16.85■□□□□ 0.29
DDX39A-218ENST00000592632 RGL2O15211 777 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms