RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 CYP19A1P11511 503 aaPredicted RBP12.68□□□□□ -0.38
TPM4-215ENST00000592138 CRKLP46109 303 aaKnown RBP12.68□□□□□ -0.38
TPM4-215ENST00000592138 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
TPM4-215ENST00000592138 MIS18AQ9NYP9 233 aa12.68□□□□□ -0.38
TPM4-215ENST00000592138 PNPLA7Q6ZV29 1317 aa12.67□□□□□ -0.38
TPM4-215ENST00000592138 ZNF521Q96K83 1311 aa12.67□□□□□ -0.38
TPM4-215ENST00000592138 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
TPM4-215ENST00000592138 RPS6KA4O75676 772 aa12.67□□□□□ -0.38
TPM4-215ENST00000592138 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
TPM4-215ENST00000592138 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
TPM4-215ENST00000592138 RTCBQ9Y3I0 505 aaKnown RBP12.67□□□□□ -0.38
TPM4-215ENST00000592138 CHD4Q14839 1912 aa12.66□□□□□ -0.38
TPM4-215ENST00000592138 GNPATO15228 680 aa12.66□□□□□ -0.38
TPM4-215ENST00000592138 HOXB7P09629 217 aa12.66□□□□□ -0.38
TPM4-215ENST00000592138 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
TPM4-215ENST00000592138 MBIPQ9NS73 344 aa12.66□□□□□ -0.38
TPM4-215ENST00000592138 SOS1Q07889 1333 aaPredicted RBP12.65□□□□□ -0.38
TPM4-215ENST00000592138 ERBB4Q15303 1308 aa12.64□□□□□ -0.39
TPM4-215ENST00000592138 UBR3Q6ZT12 1888 aa12.64□□□□□ -0.39
TPM4-215ENST00000592138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
TPM4-215ENST00000592138 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
TPM4-215ENST00000592138 ZBTB1Q9Y2K1 713 aa12.64□□□□□ -0.39
TPM4-215ENST00000592138 LAS1LQ9Y4W2 734 aaKnown RBP12.64□□□□□ -0.39
TPM4-215ENST00000592138 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
TPM4-215ENST00000592138 TUBGCP6Q96RT7 1819 aa12.63□□□□□ -0.39
TPM4-215ENST00000592138 IL6STP40189 918 aaPredicted RBP12.63□□□□□ -0.39
TPM4-215ENST00000592138 EIF5P55010 431 aaKnown RBP12.63□□□□□ -0.39
TPM4-215ENST00000592138 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
TPM4-215ENST00000592138 COL23A1Q86Y22 540 aaPredicted RBP12.63□□□□□ -0.39
TPM4-215ENST00000592138 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
TPM4-215ENST00000592138 MTFR1LQ9H019 292 aa12.63□□□□□ -0.39
TPM4-215ENST00000592138 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
TPM4-215ENST00000592138 COL15A1P39059 1388 aa12.62□□□□□ -0.39
TPM4-215ENST00000592138 PRAMEF22A3QJZ6 481 aa12.62□□□□□ -0.39
TPM4-215ENST00000592138 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
TPM4-215ENST00000592138 A0A087WZG4 1122 aa12.61□□□□□ -0.39
TPM4-215ENST00000592138 PHF14O94880 888 aa12.61□□□□□ -0.39
TPM4-215ENST00000592138 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
TPM4-215ENST00000592138 MYH16Q9H6N6 1097 aa12.61□□□□□ -0.39
TPM4-215ENST00000592138 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
TPM4-215ENST00000592138 MYH14Q7Z406 1995 aaKnown RBP12.61□□□□□ -0.39
TPM4-215ENST00000592138 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
TPM4-215ENST00000592138 RGL2O15211 777 aa12.6□□□□□ -0.39
TPM4-215ENST00000592138 A1BGP04217 495 aa12.6□□□□□ -0.39
TPM4-215ENST00000592138 RFC4P35249 363 aa12.6□□□□□ -0.39
TPM4-215ENST00000592138 GOLGA2Q08379 1002 aa12.6□□□□□ -0.39
TPM4-215ENST00000592138 ZNF784Q8NCA9 323 aaPredicted RBP12.6□□□□□ -0.39
TPM4-215ENST00000592138 SPON1Q9HCB6 807 aa12.6□□□□□ -0.39
TPM4-215ENST00000592138 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
TPM4-215ENST00000592138 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
TPM4-215ENST00000592138 SENP3-EIF4A1A0A087X0R7 540 aa12.59□□□□□ -0.39
TPM4-215ENST00000592138 E9PSI1 815 aa12.59□□□□□ -0.39
TPM4-215ENST00000592138 CANXP27824 592 aaKnown RBP12.59□□□□□ -0.39
TPM4-215ENST00000592138 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
TPM4-215ENST00000592138 TSR2Q969E8 191 aaKnown RBP12.59□□□□□ -0.39
TPM4-215ENST00000592138 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
TPM4-215ENST00000592138 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
TPM4-215ENST00000592138 C4AP0C0L4 1744 aa12.58□□□□□ -0.4
TPM4-215ENST00000592138 KRT24Q2M2I5 525 aa12.58□□□□□ -0.4
TPM4-215ENST00000592138 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
TPM4-215ENST00000592138 NPM2Q86SE8 214 aaKnown RBP12.58□□□□□ -0.4
TPM4-215ENST00000592138 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
TPM4-215ENST00000592138 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
TPM4-215ENST00000592138 SPINK5Q9NQ38 1064 aaPredicted RBP12.58□□□□□ -0.4
TPM4-215ENST00000592138 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 GYS1P13807 737 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 PTGER2P43116 358 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 PDIA6Q15084 440 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 IFFO2Q5TF58 517 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 SMIM5Q71RC9 77 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 LRP10Q7Z4F1 713 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 NLGN1Q8N2Q7 840 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
TPM4-215ENST00000592138 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
TPM4-215ENST00000592138 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
TPM4-215ENST00000592138 ZPR1O75312 459 aa12.56□□□□□ -0.4
TPM4-215ENST00000592138 EIF2S2P20042 333 aaKnown RBP12.56□□□□□ -0.4
TPM4-215ENST00000592138 POLD1P28340 1107 aa12.56□□□□□ -0.4
TPM4-215ENST00000592138 SLFN5Q08AF3 891 aa12.56□□□□□ -0.4
TPM4-215ENST00000592138 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
TPM4-215ENST00000592138 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
TPM4-215ENST00000592138 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
TPM4-215ENST00000592138 ZBED9Q6R2W3 1325 aa12.56□□□□□ -0.4
TPM4-215ENST00000592138 SCN7AQ01118 1682 aa12.55□□□□□ -0.4
TPM4-215ENST00000592138 HNRNPUQ00839 825 aaKnown RBP eCLIP12.55□□□□□ -0.4
TPM4-215ENST00000592138 CCDC30Q5VVM6 783 aa12.55□□□□□ -0.4
TPM4-215ENST00000592138 CLEC4GQ6UXB4 293 aa12.55□□□□□ -0.4
TPM4-215ENST00000592138 DZIP3Q86Y13 1208 aaKnown RBP12.55□□□□□ -0.4
TPM4-215ENST00000592138 TSPYL6Q8N831 410 aa12.55□□□□□ -0.4
TPM4-215ENST00000592138 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
TPM4-215ENST00000592138 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
TPM4-215ENST00000592138 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
TPM4-215ENST00000592138 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
TPM4-215ENST00000592138 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
TPM4-215ENST00000592138 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
TPM4-215ENST00000592138 HYPKQ9NX55 129 aa12.54□□□□□ -0.4
TPM4-215ENST00000592138 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
TPM4-215ENST00000592138 VAMP4O75379 141 aa12.53□□□□□ -0.4
TPM4-215ENST00000592138 CT47B1P0C2W7 299 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms