RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 TRIM22Q8IYM9 498 aa7.76□□□□□ -1.17
NPC1-213ENST00000591955 ZNF784Q8NCA9 323 aaPredicted RBP7.76□□□□□ -1.17
NPC1-213ENST00000591955 GALNT6Q8NCL4 622 aa7.76□□□□□ -1.17
NPC1-213ENST00000591955 MAGI3Q5TCQ9 1506 aa7.76□□□□□ -1.17
NPC1-213ENST00000591955 CNTLNQ9NXG0 1405 aa7.76□□□□□ -1.17
NPC1-213ENST00000591955 ZC3H4Q9UPT8 1303 aaKnown RBP7.76□□□□□ -1.17
NPC1-213ENST00000591955 K7ELQ4 463 aaPredicted RBP7.75□□□□□ -1.17
NPC1-213ENST00000591955 LILRA1O75019 489 aa7.75□□□□□ -1.17
NPC1-213ENST00000591955 ADD1P35611 737 aaKnown RBP7.75□□□□□ -1.17
NPC1-213ENST00000591955 CTDSPL2Q05D32 466 aa7.75□□□□□ -1.17
NPC1-213ENST00000591955 LRRC4BQ9NT99 713 aa7.75□□□□□ -1.17
NPC1-213ENST00000591955 CCDC18Q5T9S5 1454 aa7.75□□□□□ -1.17
NPC1-213ENST00000591955 GPR25O00155 361 aa7.74□□□□□ -1.17
NPC1-213ENST00000591955 NEDD1Q8NHV4 660 aa7.74□□□□□ -1.17
NPC1-213ENST00000591955 ACDQ96AP0 544 aa7.74□□□□□ -1.17
NPC1-213ENST00000591955 CD109Q6YHK3 1445 aa7.74□□□□□ -1.17
NPC1-213ENST00000591955 KTN1Q86UP2 1357 aaKnown RBP7.73□□□□□ -1.17
NPC1-213ENST00000591955 TIAM1Q13009 1591 aa7.73□□□□□ -1.17
NPC1-213ENST00000591955 CLK2P49760 499 aaKnown RBP7.73□□□□□ -1.17
NPC1-213ENST00000591955 VSIG10Q8N0Z9 540 aa7.73□□□□□ -1.17
NPC1-213ENST00000591955 NUDCQ9Y266 331 aa7.73□□□□□ -1.17
NPC1-213ENST00000591955 GPSM3Q9Y4H4 160 aa7.73□□□□□ -1.17
NPC1-213ENST00000591955 UGGT2Q9NYU1 1516 aa7.73□□□□□ -1.17
NPC1-213ENST00000591955 RNF144AP50876 292 aaPredicted RBP7.72□□□□□ -1.17
NPC1-213ENST00000591955 DBN1Q16643 649 aa7.72□□□□□ -1.17
NPC1-213ENST00000591955 NBPF20Q3BBV1 942 aa7.72□□□□□ -1.17
NPC1-213ENST00000591955 FOXR1Q6PIV2 292 aa7.72□□□□□ -1.17
NPC1-213ENST00000591955 PRICKLE2Q7Z3G6 844 aa7.72□□□□□ -1.17
NPC1-213ENST00000591955 ADAM32Q8TC27 787 aa7.72□□□□□ -1.17
NPC1-213ENST00000591955 CENPJQ9HC77 1338 aaPredicted RBP7.72□□□□□ -1.17
NPC1-213ENST00000591955 ARHGEF40Q8TER5 1519 aa7.72□□□□□ -1.17
NPC1-213ENST00000591955 ABCA8O94911 1581 aa7.71□□□□□ -1.17
NPC1-213ENST00000591955 KIF27Q86VH2 1401 aa7.71□□□□□ -1.17
NPC1-213ENST00000591955 RHOQP17081 205 aa7.71□□□□□ -1.18
NPC1-213ENST00000591955 PTK2Q05397 1052 aa7.71□□□□□ -1.18
NPC1-213ENST00000591955 B4GALNT3Q6L9W6 998 aa7.71□□□□□ -1.18
NPC1-213ENST00000591955 Q8N3U1 123 aa7.71□□□□□ -1.18
NPC1-213ENST00000591955 LRRN4Q8WUT4 740 aa7.71□□□□□ -1.18
NPC1-213ENST00000591955 AK7Q96M32 723 aa7.71□□□□□ -1.18
NPC1-213ENST00000591955 ISY1Q9ULR0 285 aaKnown RBP7.71□□□□□ -1.18
NPC1-213ENST00000591955 ARID4BQ4LE39 1312 aaPredicted RBP7.71□□□□□ -1.18
NPC1-213ENST00000591955 ARAP3Q8WWN8 1544 aa7.7□□□□□ -1.18
NPC1-213ENST00000591955 ERVH48-1M5A8F1 160 aa7.7□□□□□ -1.18
NPC1-213ENST00000591955 BAG6P46379 1132 aa7.7□□□□□ -1.18
NPC1-213ENST00000591955 INSRP06213 1382 aa7.7□□□□□ -1.18
NPC1-213ENST00000591955 CARMIL1Q5VZK9 1371 aa7.7□□□□□ -1.18
NPC1-213ENST00000591955 CTTNBP2Q8WZ74 1663 aa7.7□□□□□ -1.18
NPC1-213ENST00000591955 ARID3CA6NKF2 412 aa7.69□□□□□ -1.18
NPC1-213ENST00000591955 NCLP19338 710 aaKnown RBP7.69□□□□□ -1.18
NPC1-213ENST00000591955 NR6A1Q15406 480 aa7.69□□□□□ -1.18
NPC1-213ENST00000591955 FER1L4A9Z1Z3 1794 aa7.69□□□□□ -1.18
NPC1-213ENST00000591955 CCDC144AA2RUR9 1427 aa7.69□□□□□ -1.18
NPC1-213ENST00000591955 LRRC9Q6ZRR7 1453 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 ZMYM4Q5VZL5 1548 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 ABCA9Q8IUA7 1624 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 KRBA1A5PL33 1030 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.68□□□□□ -1.18
NPC1-213ENST00000591955 ESPNB1AK53 854 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 OIP5O43482 229 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 HSP90AA1P07900 732 aaKnown RBP7.68□□□□□ -1.18
NPC1-213ENST00000591955 RAB15P59190 212 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 PDE3BQ13370 1112 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 HSP90AA2PQ14568 343 aaPredicted RBP7.68□□□□□ -1.18
NPC1-213ENST00000591955 GTPBP3Q969Y2 492 aaKnown RBP7.68□□□□□ -1.18
NPC1-213ENST00000591955 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 KRTAP9-2Q9BYQ4 174 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 DYRK1BQ9Y463 629 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 HFM1A2PYH4 1435 aa7.68□□□□□ -1.18
NPC1-213ENST00000591955 RICTORQ6R327 1708 aa7.67□□□□□ -1.18
NPC1-213ENST00000591955 STRCQ7RTU9 1775 aa7.67□□□□□ -1.18
NPC1-213ENST00000591955 H7C1W4 665 aa7.67□□□□□ -1.18
NPC1-213ENST00000591955 RAPGEF3O95398 923 aa7.67□□□□□ -1.18
NPC1-213ENST00000591955 GPC1P35052 558 aa7.67□□□□□ -1.18
NPC1-213ENST00000591955 EIF4G2P78344 907 aaKnown RBP eCLIP7.67□□□□□ -1.18
NPC1-213ENST00000591955 RIPOR1Q6ZS17 1223 aa7.67□□□□□ -1.18
NPC1-213ENST00000591955 MAP7D2Q96T17 732 aa7.67□□□□□ -1.18
NPC1-213ENST00000591955 BACH2Q9BYV9 841 aa7.67□□□□□ -1.18
NPC1-213ENST00000591955 ROCK2O75116 1388 aaKnown RBP7.67□□□□□ -1.18
NPC1-213ENST00000591955 AKNAQ7Z591 1439 aa7.67□□□□□ -1.18
NPC1-213ENST00000591955 TPM2P07951 284 aa7.66□□□□□ -1.18
NPC1-213ENST00000591955 SNRPNP63162 240 aaKnown RBP7.66□□□□□ -1.18
NPC1-213ENST00000591955 PDE4DQ08499 809 aa7.66□□□□□ -1.18
NPC1-213ENST00000591955 PPP2R2DQ66LE6 453 aa7.66□□□□□ -1.18
NPC1-213ENST00000591955 TRERF1Q96PN7 1200 aa7.66□□□□□ -1.18
NPC1-213ENST00000591955 PRKRIP1Q9H875 184 aaPredicted RBP7.66□□□□□ -1.18
NPC1-213ENST00000591955 POLR3EQ9NVU0 708 aa7.66□□□□□ -1.18
NPC1-213ENST00000591955 NCOA1Q15788 1441 aa7.66□□□□□ -1.18
NPC1-213ENST00000591955 ARHGAP35Q9NRY4 1499 aa7.66□□□□□ -1.18
NPC1-213ENST00000591955 PREX1Q8TCU6 1659 aa7.66□□□□□ -1.18
NPC1-213ENST00000591955 POLR1AO95602 1720 aaPredicted RBP7.66□□□□□ -1.18
NPC1-213ENST00000591955 MX2P20592 715 aa7.65□□□□□ -1.18
NPC1-213ENST00000591955 TTC37Q6PGP7 1564 aa7.65□□□□□ -1.18
NPC1-213ENST00000591955 ALYREFQ86V81 257 aaKnown RBP7.65□□□□□ -1.18
NPC1-213ENST00000591955 MIA2Q96PC5 1412 aa7.65□□□□□ -1.18
NPC1-213ENST00000591955 ZMYND15Q9H091 742 aa7.65□□□□□ -1.18
NPC1-213ENST00000591955 PNNQ9H307 717 aaKnown RBP7.65□□□□□ -1.18
NPC1-213ENST00000591955 MRS2Q9HD23 443 aa7.65□□□□□ -1.18
NPC1-213ENST00000591955 NSFL1CQ9UNZ2 370 aaKnown RBP7.65□□□□□ -1.18
NPC1-213ENST00000591955 FMN1Q68DA7 1419 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms