RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 WDR44Q5JSH3 913 aa6.57□□□□□ -1.36
VMP1-212ENST00000591782 SH3PXD2AQ5TCZ1 1133 aa6.57□□□□□ -1.36
VMP1-212ENST00000591782 CHMP7Q8WUX9 453 aaPredicted RBP6.57□□□□□ -1.36
VMP1-212ENST00000591782 CLP1Q92989 425 aaKnown RBP6.57□□□□□ -1.36
VMP1-212ENST00000591782 TIMMDC1Q9NPL8 285 aa6.57□□□□□ -1.36
VMP1-212ENST00000591782 SLC35F4A4IF30 521 aa6.56□□□□□ -1.36
VMP1-212ENST00000591782 IGFBP4P22692 258 aa6.56□□□□□ -1.36
VMP1-212ENST00000591782 NOS2P35228 1153 aa6.56□□□□□ -1.36
VMP1-212ENST00000591782 TEAD4Q15561 434 aa6.56□□□□□ -1.36
VMP1-212ENST00000591782 OCLNQ16625 522 aa6.56□□□□□ -1.36
VMP1-212ENST00000591782 L3MBTL2Q969R5 705 aa6.56□□□□□ -1.36
VMP1-212ENST00000591782 ZNF232Q9UNY5 417 aa6.56□□□□□ -1.36
VMP1-212ENST00000591782 SERTM1A2A2V5 107 aa6.55□□□□□ -1.36
VMP1-212ENST00000591782 EML1O00423 815 aa6.55□□□□□ -1.36
VMP1-212ENST00000591782 CCDC155Q8N6L0 562 aa6.55□□□□□ -1.36
VMP1-212ENST00000591782 AIDAQ96BJ3 306 aa6.55□□□□□ -1.36
VMP1-212ENST00000591782 CXXC1Q9P0U4 656 aaPredicted RBP6.55□□□□□ -1.36
VMP1-212ENST00000591782 CHMP3Q9Y3E7 222 aa6.55□□□□□ -1.36
VMP1-212ENST00000591782 ATP2B4P23634 1241 aa6.54□□□□□ -1.36
VMP1-212ENST00000591782 TXLNAP40222 546 aa6.54□□□□□ -1.36
VMP1-212ENST00000591782 FKBP5Q13451 457 aaPredicted RBP6.54□□□□□ -1.36
VMP1-212ENST00000591782 POTEAQ6S8J7 498 aa6.54□□□□□ -1.36
VMP1-212ENST00000591782 GAS2L1Q99501 681 aaPredicted RBP6.54□□□□□ -1.36
VMP1-212ENST00000591782 C2orf49Q9BVC5 232 aaPredicted RBP6.54□□□□□ -1.36
VMP1-212ENST00000591782 DYRK1BQ9Y463 629 aa6.54□□□□□ -1.36
VMP1-212ENST00000591782 A0A1B0GTH6 734 aa6.53□□□□□ -1.36
VMP1-212ENST00000591782 FOXO3O43524 673 aa6.53□□□□□ -1.36
VMP1-212ENST00000591782 STAG2Q8N3U4 1231 aa6.53□□□□□ -1.36
VMP1-212ENST00000591782 GPAMQ9HCL2 828 aa6.53□□□□□ -1.36
VMP1-212ENST00000591782 HCN4Q9Y3Q4 1203 aa6.53□□□□□ -1.36
VMP1-212ENST00000591782 PPFIA3O75145 1194 aa6.52□□□□□ -1.37
VMP1-212ENST00000591782 ATP4AP20648 1035 aa6.52□□□□□ -1.37
VMP1-212ENST00000591782 SSFA2P28290 1259 aa6.52□□□□□ -1.37
VMP1-212ENST00000591782 MSX1P28360 303 aa6.52□□□□□ -1.37
VMP1-212ENST00000591782 VEGFBP49765 207 aa6.52□□□□□ -1.37
VMP1-212ENST00000591782 HIRAP54198 1017 aaPredicted RBP6.52□□□□□ -1.37
VMP1-212ENST00000591782 NBPF1Q3BBV0 1214 aa6.52□□□□□ -1.37
VMP1-212ENST00000591782 MKNK1Q9BUB5 465 aa6.52□□□□□ -1.37
VMP1-212ENST00000591782 F11P03951 625 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 ITGA6P23229 1130 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 SCNN1AP37088 669 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 PDE4CQ08493 712 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 PHLDB3Q6NSJ2 640 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 RIPOR1Q6ZS17 1223 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 CAPN12Q6ZSI9 719 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 ALDH16A1Q8IZ83 802 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 VTI1AQ96AJ9 217 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 NGLY1Q96IV0 654 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 PHACTR1Q9C0D0 580 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 RUBCNLQ9H714 662 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 ZDHHC3Q9NYG2 299 aa6.51□□□□□ -1.37
VMP1-212ENST00000591782 NXF1Q9UBU9 619 aaKnown RBP6.51□□□□□ -1.37
VMP1-212ENST00000591782 TATP17735 454 aaPredicted RBP6.5□□□□□ -1.37
VMP1-212ENST00000591782 C1orf216Q8TAB5 229 aa6.5□□□□□ -1.37
VMP1-212ENST00000591782 CUEDC1Q9NWM3 386 aaPredicted RBP6.5□□□□□ -1.37
VMP1-212ENST00000591782 THBS1P07996 1170 aa6.49□□□□□ -1.37
VMP1-212ENST00000591782 ARSJQ5FYB0 599 aaPredicted RBP6.49□□□□□ -1.37
VMP1-212ENST00000591782 RHPN1Q8TCX5 695 aa6.49□□□□□ -1.37
VMP1-212ENST00000591782 KLRG1Q96E93 195 aa6.49□□□□□ -1.37
VMP1-212ENST00000591782 QTRT2Q9H974 415 aaKnown RBP6.49□□□□□ -1.37
VMP1-212ENST00000591782 NAA30Q147X3 362 aaPredicted RBP6.48□□□□□ -1.37
VMP1-212ENST00000591782 DBN1Q16643 649 aa6.48□□□□□ -1.37
VMP1-212ENST00000591782 C1orf53Q5VUE5 145 aa6.48□□□□□ -1.37
VMP1-212ENST00000591782 BICDL1Q6ZP65 573 aa6.48□□□□□ -1.37
VMP1-212ENST00000591782 PGBD3Q8N328 593 aa6.48□□□□□ -1.37
VMP1-212ENST00000591782 C7orf43Q8WVR3 580 aa6.48□□□□□ -1.37
VMP1-212ENST00000591782 COL26A1Q96A83 441 aa6.48□□□□□ -1.37
VMP1-212ENST00000591782 ZIC5Q96T25 663 aa6.48□□□□□ -1.37
VMP1-212ENST00000591782 CRISPLD1Q9H336 500 aa6.48□□□□□ -1.37
VMP1-212ENST00000591782 A0A1W2PNR3 127 aa6.47□□□□□ -1.37
VMP1-212ENST00000591782 CDC14CA4D256 554 aa6.47□□□□□ -1.37
VMP1-212ENST00000591782 H3BM21 787 aa6.47□□□□□ -1.37
VMP1-212ENST00000591782 TERTO14746 1132 aaKnown RBP6.47□□□□□ -1.37
VMP1-212ENST00000591782 PTCD1O75127 700 aaKnown RBP6.47□□□□□ -1.37
VMP1-212ENST00000591782 RTN1Q16799 776 aa6.47□□□□□ -1.37
VMP1-212ENST00000591782 B4GALNT3Q6L9W6 998 aa6.47□□□□□ -1.37
VMP1-212ENST00000591782 NPAS3Q8IXF0 933 aa6.47□□□□□ -1.37
VMP1-212ENST00000591782 TRIM22Q8IYM9 498 aa6.47□□□□□ -1.37
VMP1-212ENST00000591782 ZNF837Q96EG3 531 aaPredicted RBP6.47□□□□□ -1.37
VMP1-212ENST00000591782 TRAIPQ9BWF2 469 aa6.47□□□□□ -1.37
VMP1-212ENST00000591782 NUCKS1Q9H1E3 243 aaKnown RBP6.47□□□□□ -1.37
VMP1-212ENST00000591782 SEPT3Q9UH03 358 aa6.47□□□□□ -1.37
VMP1-212ENST00000591782 H7C1W4 665 aa6.46□□□□□ -1.38
VMP1-212ENST00000591782 VWA5B2Q8N398 1253 aa6.46□□□□□ -1.38
VMP1-212ENST00000591782 ZNF775Q96BV0 537 aaPredicted RBP6.46□□□□□ -1.38
VMP1-212ENST00000591782 SAP130Q9H0E3 1048 aa6.46□□□□□ -1.38
VMP1-212ENST00000591782 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.46□□□□□ -1.38
VMP1-212ENST00000591782 LRFN2Q9ULH4 789 aa6.46□□□□□ -1.38
VMP1-212ENST00000591782 PDIA4P13667 645 aaKnown RBP6.45□□□□□ -1.38
VMP1-212ENST00000591782 NFX1Q12986 1120 aaKnown RBP6.45□□□□□ -1.38
VMP1-212ENST00000591782 DGKZQ13574 1117 aa6.45□□□□□ -1.38
VMP1-212ENST00000591782 EFHC2Q5JST6 749 aa6.45□□□□□ -1.38
VMP1-212ENST00000591782 COX20Q5RI15 118 aa6.45□□□□□ -1.38
VMP1-212ENST00000591782 C16orf46Q6P387 395 aa6.45□□□□□ -1.38
VMP1-212ENST00000591782 LRRC69Q6ZNQ3 347 aa6.45□□□□□ -1.38
VMP1-212ENST00000591782 HOMEZQ8IX15 550 aa6.45□□□□□ -1.38
VMP1-212ENST00000591782 ZNF280CQ8ND82 737 aa6.45□□□□□ -1.38
VMP1-212ENST00000591782 MYO19Q96H55 970 aa6.45□□□□□ -1.38
VMP1-212ENST00000591782 HSH2DQ96JZ2 352 aa6.45□□□□□ -1.38
VMP1-212ENST00000591782 KLK14Q9P0G3 267 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms