RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 MYH14Q7Z406 1995 aaKnown RBP18.32■□□□□ 0.52
MBD1-225ENST00000591535 TUBGCP6Q96RT7 1819 aa18.31■□□□□ 0.52
MBD1-225ENST00000591535 GIGYF1O75420 1035 aaPredicted RBP18.31■□□□□ 0.52
MBD1-225ENST00000591535 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
MBD1-225ENST00000591535 FLAD1Q8NFF5 587 aa18.31■□□□□ 0.52
MBD1-225ENST00000591535 PDGFDQ9GZP0 370 aaPredicted RBP18.31■□□□□ 0.52
MBD1-225ENST00000591535 UBR3Q6ZT12 1888 aa18.31■□□□□ 0.52
MBD1-225ENST00000591535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.31■□□□□ 0.52
MBD1-225ENST00000591535 TRAPPC3LQ5T215 181 aa18.31■□□□□ 0.52
MBD1-225ENST00000591535 INTS5Q6P9B9 1019 aaKnown RBP18.31■□□□□ 0.52
MBD1-225ENST00000591535 IL16Q14005 1332 aa18.3■□□□□ 0.52
MBD1-225ENST00000591535 RPS6KA4O75676 772 aa18.3■□□□□ 0.52
MBD1-225ENST00000591535 SSFA2P28290 1259 aa18.3■□□□□ 0.52
MBD1-225ENST00000591535 AMIGO3Q86WK7 504 aa18.3■□□□□ 0.52
MBD1-225ENST00000591535 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
MBD1-225ENST00000591535 TSR2Q969E8 191 aaKnown RBP18.3■□□□□ 0.52
MBD1-225ENST00000591535 ZBTB1Q9Y2K1 713 aa18.3■□□□□ 0.52
MBD1-225ENST00000591535 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
MBD1-225ENST00000591535 A1BGP04217 495 aa18.29■□□□□ 0.52
MBD1-225ENST00000591535 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
MBD1-225ENST00000591535 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
MBD1-225ENST00000591535 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
MBD1-225ENST00000591535 EIF2S2P20042 333 aaKnown RBP18.28■□□□□ 0.52
MBD1-225ENST00000591535 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
MBD1-225ENST00000591535 ZBTB7AO95365 584 aa18.27■□□□□ 0.52
MBD1-225ENST00000591535 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.51
MBD1-225ENST00000591535 RFC4P35249 363 aa18.27■□□□□ 0.51
MBD1-225ENST00000591535 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.51
MBD1-225ENST00000591535 ARXQ96QS3 562 aa18.27■□□□□ 0.51
MBD1-225ENST00000591535 ADRA2BP18089 450 aa18.26■□□□□ 0.51
MBD1-225ENST00000591535 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
MBD1-225ENST00000591535 DUSP27Q5VZP5 1158 aa18.26■□□□□ 0.51
MBD1-225ENST00000591535 NECTIN2Q92692 538 aa18.26■□□□□ 0.51
MBD1-225ENST00000591535 ARHGEF1Q92888 912 aaKnown RBP18.26■□□□□ 0.51
MBD1-225ENST00000591535 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
MBD1-225ENST00000591535 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
MBD1-225ENST00000591535 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
MBD1-225ENST00000591535 SRCAPQ6ZRS2 3230 aa18.25■□□□□ 0.51
MBD1-225ENST00000591535 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
MBD1-225ENST00000591535 SOS1Q07889 1333 aaPredicted RBP18.25■□□□□ 0.51
MBD1-225ENST00000591535 ZNF521Q96K83 1311 aa18.25■□□□□ 0.51
MBD1-225ENST00000591535 SLC16A10Q8TF71 515 aa18.24■□□□□ 0.51
MBD1-225ENST00000591535 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
MBD1-225ENST00000591535 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
MBD1-225ENST00000591535 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
MBD1-225ENST00000591535 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
MBD1-225ENST00000591535 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
MBD1-225ENST00000591535 ZPR1O75312 459 aa18.23■□□□□ 0.51
MBD1-225ENST00000591535 EIF5P55010 431 aaKnown RBP18.23■□□□□ 0.51
MBD1-225ENST00000591535 HDGFL1Q5TGJ6 251 aa18.23■□□□□ 0.51
MBD1-225ENST00000591535 COL15A1P39059 1388 aa18.23■□□□□ 0.51
MBD1-225ENST00000591535 A0A087WZG4 1122 aa18.22■□□□□ 0.51
MBD1-225ENST00000591535 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
MBD1-225ENST00000591535 HOXB7P09629 217 aa18.22■□□□□ 0.51
MBD1-225ENST00000591535 MYL6BP14649 208 aa18.22■□□□□ 0.51
MBD1-225ENST00000591535 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
MBD1-225ENST00000591535 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
MBD1-225ENST00000591535 SPON1Q9HCB6 807 aa18.22■□□□□ 0.51
MBD1-225ENST00000591535 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
MBD1-225ENST00000591535 E9PSI1 815 aa18.2■□□□□ 0.5
MBD1-225ENST00000591535 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
MBD1-225ENST00000591535 TSPYL6Q8N831 410 aa18.2■□□□□ 0.5
MBD1-225ENST00000591535 CDCA7LQ96GN5 454 aa18.2■□□□□ 0.5
MBD1-225ENST00000591535 SRP68Q9UHB9 627 aaKnown RBP18.2■□□□□ 0.5
MBD1-225ENST00000591535 TBC1D2BQ9UPU7 963 aa18.2■□□□□ 0.5
MBD1-225ENST00000591535 TWISTNBQ3B726 338 aaPredicted RBP18.2■□□□□ 0.5
MBD1-225ENST00000591535 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
MBD1-225ENST00000591535 ERBB4Q15303 1308 aa18.19■□□□□ 0.5
MBD1-225ENST00000591535 USPL1Q5W0Q7 1092 aa18.19■□□□□ 0.5
MBD1-225ENST00000591535 CHMP4AQ9BY43 222 aa18.19■□□□□ 0.5
MBD1-225ENST00000591535 NARFQ9UHQ1 456 aa18.19■□□□□ 0.5
MBD1-225ENST00000591535 USP42Q9H9J4 1324 aaKnown RBP18.18■□□□□ 0.5
MBD1-225ENST00000591535 ANXA1P04083 346 aa18.18■□□□□ 0.5
MBD1-225ENST00000591535 POLD1P28340 1107 aa18.18■□□□□ 0.5
MBD1-225ENST00000591535 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
MBD1-225ENST00000591535 DZIP3Q86Y13 1208 aaKnown RBP18.17■□□□□ 0.5
MBD1-225ENST00000591535 NLGN1Q8N2Q7 840 aa18.17■□□□□ 0.5
MBD1-225ENST00000591535 CHPF2Q9P2E5 772 aa18.17■□□□□ 0.5
MBD1-225ENST00000591535 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
MBD1-225ENST00000591535 GYS1P13807 737 aa18.16■□□□□ 0.5
MBD1-225ENST00000591535 PROSER3Q2NL68 480 aa18.16■□□□□ 0.5
MBD1-225ENST00000591535 PDIA6Q15084 440 aa18.16■□□□□ 0.5
MBD1-225ENST00000591535 CCDC30Q5VVM6 783 aa18.16■□□□□ 0.5
MBD1-225ENST00000591535 DDX21Q9NR30 783 aaKnown RBP eCLIP18.16■□□□□ 0.5
MBD1-225ENST00000591535 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
MBD1-225ENST00000591535 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
MBD1-225ENST00000591535 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
MBD1-225ENST00000591535 AIMP1Q12904 312 aaKnown RBP18.14■□□□□ 0.49
MBD1-225ENST00000591535 FKBP8Q14318 412 aa18.14■□□□□ 0.49
MBD1-225ENST00000591535 STK31Q9BXU1 1019 aa18.14■□□□□ 0.49
MBD1-225ENST00000591535 VAMP4O75379 141 aa18.13■□□□□ 0.49
MBD1-225ENST00000591535 PTGER2P43116 358 aa18.13■□□□□ 0.49
MBD1-225ENST00000591535 TTLL7Q6ZT98 887 aa18.13■□□□□ 0.49
MBD1-225ENST00000591535 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
MBD1-225ENST00000591535 ZBED9Q6R2W3 1325 aa18.13■□□□□ 0.49
MBD1-225ENST00000591535 MMP10P09238 476 aa18.12■□□□□ 0.49
MBD1-225ENST00000591535 COPS6Q7L5N1 327 aa18.12■□□□□ 0.49
MBD1-225ENST00000591535 XAGE3Q8WTP9 111 aa18.12■□□□□ 0.49
MBD1-225ENST00000591535 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
MBD1-225ENST00000591535 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms