RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 POLKQ9UBT6 870 aa8.61□□□□□ -1.03
VPS4B-205ENST00000591383 RGS17Q9UGC6 210 aaPredicted RBP8.61□□□□□ -1.03
VPS4B-205ENST00000591383 AXIN2Q9Y2T1 843 aa8.61□□□□□ -1.03
VPS4B-205ENST00000591383 BRWD3Q6RI45 1802 aa8.61□□□□□ -1.03
VPS4B-205ENST00000591383 PPP2R1AP30153 589 aa8.6□□□□□ -1.03
VPS4B-205ENST00000591383 MCM6Q14566 821 aa8.6□□□□□ -1.03
VPS4B-205ENST00000591383 VPS72Q15906 364 aa8.6□□□□□ -1.03
VPS4B-205ENST00000591383 TSR1Q2NL82 804 aaKnown RBP8.6□□□□□ -1.03
VPS4B-205ENST00000591383 POTEAQ6S8J7 498 aa8.6□□□□□ -1.03
VPS4B-205ENST00000591383 USHBP1Q8N6Y0 703 aa8.6□□□□□ -1.03
VPS4B-205ENST00000591383 QTRT2Q9H974 415 aaKnown RBP8.6□□□□□ -1.03
VPS4B-205ENST00000591383 PCDHGA10Q9Y5H3 936 aa8.6□□□□□ -1.03
VPS4B-205ENST00000591383 MEGF6O75095 1541 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 SPATA31A1Q5TZJ5 1347 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 SPATA31A5Q5VU36 1347 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 SPATA31A7Q8IWB4 1347 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 MYBBP1AQ9BQG0 1328 aaKnown RBP8.59□□□□□ -1.03
VPS4B-205ENST00000591383 ANP32CO43423 234 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 MTHFSP49914 203 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 RALBP1Q15311 655 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 FAM98CQ17RN3 349 aaKnown RBP8.59□□□□□ -1.03
VPS4B-205ENST00000591383 SLAIN1Q8ND83 568 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 CFAP53Q96M91 514 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 SHANK3Q9BYB0 1731 aa8.59□□□□□ -1.03
VPS4B-205ENST00000591383 PKD1L3Q7Z443 1732 aa8.58□□□□□ -1.04
VPS4B-205ENST00000591383 TNS2Q63HR2 1409 aa8.58□□□□□ -1.04
VPS4B-205ENST00000591383 POTEFA5A3E0 1075 aa8.58□□□□□ -1.04
VPS4B-205ENST00000591383 RXRBP28702 533 aa8.58□□□□□ -1.04
VPS4B-205ENST00000591383 RBM6P78332 1123 aaKnown RBP8.58□□□□□ -1.04
VPS4B-205ENST00000591383 EIF4A2Q14240 407 aaKnown RBP8.58□□□□□ -1.04
VPS4B-205ENST00000591383 GJD4Q96KN9 370 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-205ENST00000591383 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
VPS4B-205ENST00000591383 DISP2A7MBM2 1401 aa8.57□□□□□ -1.04
VPS4B-205ENST00000591383 TYW1BQ6NUM6 668 aa8.57□□□□□ -1.04
VPS4B-205ENST00000591383 TCP11L2Q8N4U5 519 aa8.57□□□□□ -1.04
VPS4B-205ENST00000591383 PROCA1Q8NCQ7 364 aaPredicted RBP8.57□□□□□ -1.04
VPS4B-205ENST00000591383 PRKRIP1Q9H875 184 aaPredicted RBP8.57□□□□□ -1.04
VPS4B-205ENST00000591383 FAM217BQ9NTX9 383 aaPredicted RBP8.57□□□□□ -1.04
VPS4B-205ENST00000591383 EP400Q96L91 3159 aa8.57□□□□□ -1.04
VPS4B-205ENST00000591383 U2SURPO15042 1029 aaKnown RBP8.56□□□□□ -1.04
VPS4B-205ENST00000591383 DIAPH1O60610 1272 aaKnown RBP8.56□□□□□ -1.04
VPS4B-205ENST00000591383 FAM161AQ3B820 660 aa8.56□□□□□ -1.04
VPS4B-205ENST00000591383 C3orf67Q6ZVT6 689 aa8.56□□□□□ -1.04
VPS4B-205ENST00000591383 CARD10Q9BWT7 1032 aa8.56□□□□□ -1.04
VPS4B-205ENST00000591383 DOT1LQ8TEK3 1739 aa8.56□□□□□ -1.04
VPS4B-205ENST00000591383 IGSF1Q8N6C5 1336 aa8.55□□□□□ -1.04
VPS4B-205ENST00000591383 OVOS2A0A0G2JMS6 1433 aa8.55□□□□□ -1.04
VPS4B-205ENST00000591383 NCAPD2Q15021 1401 aa8.55□□□□□ -1.04
VPS4B-205ENST00000591383 GABBR2O75899 941 aa8.55□□□□□ -1.04
VPS4B-205ENST00000591383 NBPF6Q5VWK0 638 aa8.55□□□□□ -1.04
VPS4B-205ENST00000591383 METTL3Q86U44 580 aaKnown RBP8.55□□□□□ -1.04
VPS4B-205ENST00000591383 CCDC82Q8N4S0 544 aa8.55□□□□□ -1.04
VPS4B-205ENST00000591383 RAPGEF4Q8WZA2 1011 aa8.55□□□□□ -1.04
VPS4B-205ENST00000591383 SLC39A7Q92504 469 aa8.55□□□□□ -1.04
VPS4B-205ENST00000591383 NBPF4Q96M43 638 aa8.55□□□□□ -1.04
VPS4B-205ENST00000591383 OATP04181 439 aa8.54□□□□□ -1.04
VPS4B-205ENST00000591383 HMOX1P09601 288 aa8.54□□□□□ -1.04
VPS4B-205ENST00000591383 IL2RBP14784 551 aa8.54□□□□□ -1.04
VPS4B-205ENST00000591383 DIEXFQ68CQ4 756 aaKnown RBP8.54□□□□□ -1.04
VPS4B-205ENST00000591383 AEBP1Q8IUX7 1158 aa8.54□□□□□ -1.04
VPS4B-205ENST00000591383 SEPT12Q8IYM1 358 aa8.54□□□□□ -1.04
VPS4B-205ENST00000591383 NLRP7Q8WX94 980 aa8.54□□□□□ -1.04
VPS4B-205ENST00000591383 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
VPS4B-205ENST00000591383 POLR3EQ9NVU0 708 aa8.54□□□□□ -1.04
VPS4B-205ENST00000591383 PCDHGA4Q9Y5G9 962 aa8.54□□□□□ -1.04
VPS4B-205ENST00000591383 VIRMAQ69YN4 1812 aaKnown RBP8.53□□□□□ -1.04
VPS4B-205ENST00000591383 TATP17735 454 aaPredicted RBP8.53□□□□□ -1.04
VPS4B-205ENST00000591383 IL13P35225 146 aa8.53□□□□□ -1.04
VPS4B-205ENST00000591383 DCBLD2Q96PD2 775 aa8.53□□□□□ -1.04
VPS4B-205ENST00000591383 EYA1Q99502 592 aa8.53□□□□□ -1.04
VPS4B-205ENST00000591383 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.53□□□□□ -1.04
VPS4B-205ENST00000591383 THRAP3Q9Y2W1 955 aaKnown RBP8.53□□□□□ -1.04
VPS4B-205ENST00000591383 TOGARAM1Q9Y4F4 1720 aa8.53□□□□□ -1.04
VPS4B-205ENST00000591383 KDRP35968 1356 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 U2AF1L5P0DN76 240 aaPredicted RBP8.52□□□□□ -1.05
VPS4B-205ENST00000591383 C7P10643 843 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 U2AF1Q01081 240 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPS4B-205ENST00000591383 WDR43Q15061 677 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPS4B-205ENST00000591383 DDB1Q16531 1140 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 SULT6B1Q6IMI4 303 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 PADI6Q6TGC4 694 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 PXYLP1Q8TE99 480 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 POM121Q96HA1 1249 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 CDCA7Q9BWT1 371 aaPredicted RBP8.52□□□□□ -1.05
VPS4B-205ENST00000591383 MRS2Q9HD23 443 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 NUDCQ9Y266 331 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 ADGRG1Q9Y653 693 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 NHSQ6T4R5 1651 aa8.52□□□□□ -1.05
VPS4B-205ENST00000591383 TNS1Q9HBL0 1735 aaKnown RBP8.51□□□□□ -1.05
VPS4B-205ENST00000591383 PCDH11XQ9BZA7 1347 aa8.51□□□□□ -1.05
VPS4B-205ENST00000591383 PCDH11YQ9BZA8 1340 aa8.51□□□□□ -1.05
VPS4B-205ENST00000591383 SBF2Q86WG5 1849 aa8.5□□□□□ -1.05
VPS4B-205ENST00000591383 PDE3BQ13370 1112 aa8.5□□□□□ -1.05
VPS4B-205ENST00000591383 C6orf132Q5T0Z8 1188 aa8.5□□□□□ -1.05
VPS4B-205ENST00000591383 FAM182BQ5T319 152 aa8.5□□□□□ -1.05
VPS4B-205ENST00000591383 ILDR2Q71H61 639 aa8.5□□□□□ -1.05
VPS4B-205ENST00000591383 KRT27Q7Z3Y8 459 aa8.5□□□□□ -1.05
VPS4B-205ENST00000591383 TTC13Q8NBP0 860 aa8.5□□□□□ -1.05
VPS4B-205ENST00000591383 KAT6BQ8WYB5 2073 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms