RNA–Protein interactions for RNA: ENST00000591004.1

SMIM22-208, Transcript of small integral membrane protein 22, humanhuman

TSL 3

Gene SMIM22, Length 862 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-208ENST00000591004 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
SMIM22-208ENST00000591004 ARHGEF1Q92888 912 aaKnown RBP20.34■□□□□ 0.85
SMIM22-208ENST00000591004 TEX13AQ9BXU3 409 aaPredicted RBP20.34■□□□□ 0.85
SMIM22-208ENST00000591004 KLHL34Q8N239 644 aa20.32■□□□□ 0.84
SMIM22-208ENST00000591004 FHDC1Q9C0D6 1143 aaPredicted RBP20.32■□□□□ 0.84
SMIM22-208ENST00000591004 C4AP0C0L4 1744 aa20.32■□□□□ 0.84
SMIM22-208ENST00000591004 ZBTB1Q9Y2K1 713 aa20.31■□□□□ 0.84
SMIM22-208ENST00000591004 KDM3BQ7LBC6 1761 aa20.31■□□□□ 0.84
SMIM22-208ENST00000591004 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
SMIM22-208ENST00000591004 SNRPA1P09661 255 aaKnown RBP20.3■□□□□ 0.84
SMIM22-208ENST00000591004 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
SMIM22-208ENST00000591004 APAF1O14727 1248 aa20.29■□□□□ 0.84
SMIM22-208ENST00000591004 PRAMEF22A3QJZ6 481 aa20.28■□□□□ 0.84
SMIM22-208ENST00000591004 SYT17Q9BSW7 474 aa20.28■□□□□ 0.84
SMIM22-208ENST00000591004 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
SMIM22-208ENST00000591004 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
SMIM22-208ENST00000591004 COL15A1P39059 1388 aa20.27■□□□□ 0.84
SMIM22-208ENST00000591004 NLGN1Q8N2Q7 840 aa20.27■□□□□ 0.84
SMIM22-208ENST00000591004 SRP68Q9UHB9 627 aaKnown RBP20.27■□□□□ 0.84
SMIM22-208ENST00000591004 USP16Q9Y5T5 823 aa20.27■□□□□ 0.84
SMIM22-208ENST00000591004 ZPR1O75312 459 aa20.26■□□□□ 0.83
SMIM22-208ENST00000591004 A1BGP04217 495 aa20.26■□□□□ 0.83
SMIM22-208ENST00000591004 GYS1P13807 737 aa20.26■□□□□ 0.83
SMIM22-208ENST00000591004 ZNF330Q9Y3S2 320 aaPredicted RBP20.26■□□□□ 0.83
SMIM22-208ENST00000591004 USP42Q9H9J4 1324 aaKnown RBP20.26■□□□□ 0.83
SMIM22-208ENST00000591004 MMP10P09238 476 aa20.25■□□□□ 0.83
SMIM22-208ENST00000591004 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
SMIM22-208ENST00000591004 LAS1LQ9Y4W2 734 aaKnown RBP20.25■□□□□ 0.83
SMIM22-208ENST00000591004 NPM2Q86SE8 214 aaKnown RBP20.24■□□□□ 0.83
SMIM22-208ENST00000591004 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
SMIM22-208ENST00000591004 A0A087WZG4 1122 aa20.23■□□□□ 0.83
SMIM22-208ENST00000591004 IL6STP40189 918 aaPredicted RBP20.23■□□□□ 0.83
SMIM22-208ENST00000591004 EIF5P55010 431 aaKnown RBP20.23■□□□□ 0.83
SMIM22-208ENST00000591004 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
SMIM22-208ENST00000591004 NARFQ9UHQ1 456 aa20.23■□□□□ 0.83
SMIM22-208ENST00000591004 LAMB4A4D0S4 1761 aa20.23■□□□□ 0.83
SMIM22-208ENST00000591004 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
SMIM22-208ENST00000591004 PIP4K2AP48426 406 aaPredicted RBP20.22■□□□□ 0.83
SMIM22-208ENST00000591004 FKBP8Q14318 412 aa20.22■□□□□ 0.83
SMIM22-208ENST00000591004 DCAF8L1A6NGE4 600 aa20.21■□□□□ 0.83
SMIM22-208ENST00000591004 SENP3-EIF4A1A0A087X0R7 540 aa20.2■□□□□ 0.82
SMIM22-208ENST00000591004 PARP3Q9Y6F1 533 aa20.2■□□□□ 0.82
SMIM22-208ENST00000591004 CHL1O00533 1208 aa20.19■□□□□ 0.82
SMIM22-208ENST00000591004 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
SMIM22-208ENST00000591004 NLGN2Q8NFZ4 835 aa20.19■□□□□ 0.82
SMIM22-208ENST00000591004 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
SMIM22-208ENST00000591004 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
SMIM22-208ENST00000591004 CALD1Q05682 793 aaKnown RBP20.18■□□□□ 0.82
SMIM22-208ENST00000591004 NBPF26B4DH59 902 aa20.17■□□□□ 0.82
SMIM22-208ENST00000591004 NBPF10Q6P3W6 841 aaKnown RBP20.17■□□□□ 0.82
SMIM22-208ENST00000591004 NBPF15Q8N660 670 aa20.17■□□□□ 0.82
SMIM22-208ENST00000591004 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
SMIM22-208ENST00000591004 DZIP3Q86Y13 1208 aaKnown RBP20.16■□□□□ 0.82
SMIM22-208ENST00000591004 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
SMIM22-208ENST00000591004 SCN7AQ01118 1682 aa20.16■□□□□ 0.82
SMIM22-208ENST00000591004 DDR1Q08345 913 aa20.15■□□□□ 0.82
SMIM22-208ENST00000591004 EIF2S2P20042 333 aaKnown RBP20.14■□□□□ 0.81
SMIM22-208ENST00000591004 TM4SF1P30408 202 aa20.14■□□□□ 0.81
SMIM22-208ENST00000591004 NFIXQ14938 502 aa20.14■□□□□ 0.81
SMIM22-208ENST00000591004 IFT57Q9NWB7 429 aa20.14■□□□□ 0.81
SMIM22-208ENST00000591004 GNAI1P63096 354 aa20.13■□□□□ 0.81
SMIM22-208ENST00000591004 KRT24Q2M2I5 525 aa20.13■□□□□ 0.81
SMIM22-208ENST00000591004 BICDL1Q6ZP65 573 aa20.13■□□□□ 0.81
SMIM22-208ENST00000591004 PELP1Q8IZL8 1130 aaKnown RBP20.13■□□□□ 0.81
SMIM22-208ENST00000591004 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
SMIM22-208ENST00000591004 MBIPQ9NS73 344 aa20.13■□□□□ 0.81
SMIM22-208ENST00000591004 POLRMTO00411 1230 aaKnown RBP20.12■□□□□ 0.81
SMIM22-208ENST00000591004 CAMTA2O94983 1202 aa20.12■□□□□ 0.81
SMIM22-208ENST00000591004 ZNF853P0CG23 659 aa20.12■□□□□ 0.81
SMIM22-208ENST00000591004 MYL6BP14649 208 aa20.12■□□□□ 0.81
SMIM22-208ENST00000591004 CCDC27Q2M243 656 aa20.12■□□□□ 0.81
SMIM22-208ENST00000591004 SALL2Q9Y467 1007 aaPredicted RBP20.12■□□□□ 0.81
SMIM22-208ENST00000591004 BCORQ6W2J9 1755 aa20.12■□□□□ 0.81
SMIM22-208ENST00000591004 C10orf71Q711Q0 1435 aa20.11■□□□□ 0.81
SMIM22-208ENST00000591004 ERBB4Q15303 1308 aa20.11■□□□□ 0.81
SMIM22-208ENST00000591004 GPR162Q16538 588 aa20.11■□□□□ 0.81
SMIM22-208ENST00000591004 TBC1D9BQ66K14 1250 aa20.11■□□□□ 0.81
SMIM22-208ENST00000591004 WWC1Q8IX03 1113 aa20.11■□□□□ 0.81
SMIM22-208ENST00000591004 NECTIN2Q92692 538 aa20.11■□□□□ 0.81
SMIM22-208ENST00000591004 KIF13BQ9NQT8 1826 aa20.11■□□□□ 0.81
SMIM22-208ENST00000591004 SERPINB2P05120 415 aa20.09■□□□□ 0.81
SMIM22-208ENST00000591004 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
SMIM22-208ENST00000591004 ZNF652Q9Y2D9 606 aa20.09■□□□□ 0.81
SMIM22-208ENST00000591004 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.81
SMIM22-208ENST00000591004 AFDNP55196 1824 aaKnown RBP20.08■□□□□ 0.8
SMIM22-208ENST00000591004 CCER2I3L3R5 266 aa20.07■□□□□ 0.8
SMIM22-208ENST00000591004 DUSP27Q5VZP5 1158 aa20.07■□□□□ 0.8
SMIM22-208ENST00000591004 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
SMIM22-208ENST00000591004 SETDB2Q96T68 719 aa20.07■□□□□ 0.8
SMIM22-208ENST00000591004 N4BP2Q86UW6 1770 aaPredicted RBP20.06■□□□□ 0.8
SMIM22-208ENST00000591004 ANXA1P04083 346 aa20.06■□□□□ 0.8
SMIM22-208ENST00000591004 HOXB7P09629 217 aa20.06■□□□□ 0.8
SMIM22-208ENST00000591004 TGFB2P61812 414 aa20.06■□□□□ 0.8
SMIM22-208ENST00000591004 HDGFL1Q5TGJ6 251 aa20.06■□□□□ 0.8
SMIM22-208ENST00000591004 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
SMIM22-208ENST00000591004 TTLL7Q6ZT98 887 aa20.06■□□□□ 0.8
SMIM22-208ENST00000591004 WWC3Q9ULE0 1092 aa20.06■□□□□ 0.8
SMIM22-208ENST00000591004 CARMIL3Q8ND23 1372 aa20.06■□□□□ 0.8
SMIM22-208ENST00000591004 PXDNLA1KZ92 1463 aa20.05■□□□□ 0.8
SMIM22-208ENST00000591004 NRXN2Q9P2S2 1712 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms