RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 PNPLA7Q6ZV29 1317 aa21.86■■□□□ 1.09
LSM14A-208ENST00000590416 SMIM5Q71RC9 77 aa21.86■■□□□ 1.09
LSM14A-208ENST00000590416 WDR63Q8IWG1 891 aa21.86■■□□□ 1.09
LSM14A-208ENST00000590416 CASZ1Q86V15 1759 aa21.85■■□□□ 1.09
LSM14A-208ENST00000590416 ZNF853P0CG23 659 aa21.85■■□□□ 1.09
LSM14A-208ENST00000590416 CANXP27824 592 aaKnown RBP21.85■■□□□ 1.09
LSM14A-208ENST00000590416 FLAD1Q8NFF5 587 aa21.85■■□□□ 1.09
LSM14A-208ENST00000590416 ZNF330Q9Y3S2 320 aaPredicted RBP21.85■■□□□ 1.09
LSM14A-208ENST00000590416 USP16Q9Y5T5 823 aa21.85■■□□□ 1.09
LSM14A-208ENST00000590416 IL16Q14005 1332 aa21.84■■□□□ 1.09
LSM14A-208ENST00000590416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.84■■□□□ 1.09
LSM14A-208ENST00000590416 GIGYF1O75420 1035 aaPredicted RBP21.84■■□□□ 1.09
LSM14A-208ENST00000590416 SSFA2P28290 1259 aa21.84■■□□□ 1.09
LSM14A-208ENST00000590416 TSR2Q969E8 191 aaKnown RBP21.84■■□□□ 1.09
LSM14A-208ENST00000590416 ZBTB1Q9Y2K1 713 aa21.84■■□□□ 1.09
LSM14A-208ENST00000590416 RPS6KA4O75676 772 aa21.83■■□□□ 1.09
LSM14A-208ENST00000590416 INTS5Q6P9B9 1019 aaKnown RBP21.83■■□□□ 1.09
LSM14A-208ENST00000590416 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.09
LSM14A-208ENST00000590416 COL23A1Q86Y22 540 aaPredicted RBP21.83■■□□□ 1.09
LSM14A-208ENST00000590416 PDGFDQ9GZP0 370 aaPredicted RBP21.83■■□□□ 1.09
LSM14A-208ENST00000590416 EIF2S2P20042 333 aaKnown RBP21.82■■□□□ 1.08
LSM14A-208ENST00000590416 HNRNPUQ00839 825 aaKnown RBP eCLIP21.82■■□□□ 1.08
LSM14A-208ENST00000590416 KRT24Q2M2I5 525 aa21.82■■□□□ 1.08
LSM14A-208ENST00000590416 TRAPPC3LQ5T215 181 aa21.82■■□□□ 1.08
LSM14A-208ENST00000590416 AMIGO3Q86WK7 504 aa21.82■■□□□ 1.08
LSM14A-208ENST00000590416 ZBTB7AO95365 584 aa21.81■■□□□ 1.08
LSM14A-208ENST00000590416 A1BGP04217 495 aa21.81■■□□□ 1.08
LSM14A-208ENST00000590416 PIP4K2AP48426 406 aaPredicted RBP21.81■■□□□ 1.08
LSM14A-208ENST00000590416 RFC4P35249 363 aa21.8■■□□□ 1.08
LSM14A-208ENST00000590416 NECTIN2Q92692 538 aa21.8■■□□□ 1.08
LSM14A-208ENST00000590416 MYH16Q9H6N6 1097 aa21.8■■□□□ 1.08
LSM14A-208ENST00000590416 SOS1Q07889 1333 aaPredicted RBP21.8■■□□□ 1.08
LSM14A-208ENST00000590416 COL15A1P39059 1388 aa21.79■■□□□ 1.08
LSM14A-208ENST00000590416 ADRA2BP18089 450 aa21.79■■□□□ 1.08
LSM14A-208ENST00000590416 ARXQ96QS3 562 aa21.79■■□□□ 1.08
LSM14A-208ENST00000590416 C4AP0C0L4 1744 aa21.79■■□□□ 1.08
LSM14A-208ENST00000590416 ELL2O00472 640 aaPredicted RBP21.78■■□□□ 1.08
LSM14A-208ENST00000590416 GOLGA2Q08379 1002 aa21.78■■□□□ 1.08
LSM14A-208ENST00000590416 DUSP27Q5VZP5 1158 aa21.78■■□□□ 1.08
LSM14A-208ENST00000590416 ARHGEF1Q92888 912 aaKnown RBP21.78■■□□□ 1.08
LSM14A-208ENST00000590416 ZNF521Q96K83 1311 aa21.78■■□□□ 1.08
LSM14A-208ENST00000590416 FANCIQ9NVI1 1328 aa21.78■■□□□ 1.08
LSM14A-208ENST00000590416 ATF5Q9Y2D1 282 aaPredicted RBP21.77■■□□□ 1.08
LSM14A-208ENST00000590416 HDGFL1Q5TGJ6 251 aa21.76■■□□□ 1.07
LSM14A-208ENST00000590416 MSL1Q68DK7 614 aa21.76■■□□□ 1.07
LSM14A-208ENST00000590416 SLC16A10Q8TF71 515 aa21.76■■□□□ 1.07
LSM14A-208ENST00000590416 MTFR1LQ9H019 292 aa21.76■■□□□ 1.07
LSM14A-208ENST00000590416 SPINK5Q9NQ38 1064 aaPredicted RBP21.76■■□□□ 1.07
LSM14A-208ENST00000590416 A0A087WZG4 1122 aa21.75■■□□□ 1.07
LSM14A-208ENST00000590416 ZPR1O75312 459 aa21.75■■□□□ 1.07
LSM14A-208ENST00000590416 MYL6BP14649 208 aa21.75■■□□□ 1.07
LSM14A-208ENST00000590416 IL6STP40189 918 aaPredicted RBP21.75■■□□□ 1.07
LSM14A-208ENST00000590416 SPON1Q9HCB6 807 aa21.75■■□□□ 1.07
LSM14A-208ENST00000590416 E9PSI1 815 aa21.74■■□□□ 1.07
LSM14A-208ENST00000590416 HOXB7P09629 217 aa21.74■■□□□ 1.07
LSM14A-208ENST00000590416 C8orf58Q8NAV2 365 aa21.74■■□□□ 1.07
LSM14A-208ENST00000590416 EIF5P55010 431 aaKnown RBP21.73■■□□□ 1.07
LSM14A-208ENST00000590416 SRP68Q9UHB9 627 aaKnown RBP21.73■■□□□ 1.07
LSM14A-208ENST00000590416 NBPF26B4DH59 902 aa21.72■■□□□ 1.07
LSM14A-208ENST00000590416 TWISTNBQ3B726 338 aaPredicted RBP21.72■■□□□ 1.07
LSM14A-208ENST00000590416 NBPF10Q6P3W6 841 aaKnown RBP21.72■■□□□ 1.07
LSM14A-208ENST00000590416 NBPF15Q8N660 670 aa21.72■■□□□ 1.07
LSM14A-208ENST00000590416 ERBB4Q15303 1308 aa21.72■■□□□ 1.07
LSM14A-208ENST00000590416 EXOSC9Q06265 439 aaKnown RBP21.71■■□□□ 1.07
LSM14A-208ENST00000590416 USPL1Q5W0Q7 1092 aa21.71■■□□□ 1.07
LSM14A-208ENST00000590416 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
LSM14A-208ENST00000590416 TSPYL6Q8N831 410 aa21.71■■□□□ 1.07
LSM14A-208ENST00000590416 TBC1D2BQ9UPU7 963 aa21.71■■□□□ 1.07
LSM14A-208ENST00000590416 USP42Q9H9J4 1324 aaKnown RBP21.71■■□□□ 1.07
LSM14A-208ENST00000590416 ANXA1P04083 346 aa21.7■■□□□ 1.06
LSM14A-208ENST00000590416 POLD1P28340 1107 aa21.7■■□□□ 1.06
LSM14A-208ENST00000590416 CDCA7LQ96GN5 454 aa21.7■■□□□ 1.06
LSM14A-208ENST00000590416 SLFN5Q08AF3 891 aa21.69■■□□□ 1.06
LSM14A-208ENST00000590416 CHMP4AQ9BY43 222 aa21.69■■□□□ 1.06
LSM14A-208ENST00000590416 CHPF2Q9P2E5 772 aa21.69■■□□□ 1.06
LSM14A-208ENST00000590416 PPP1R1BQ9UD71 204 aaPredicted RBP21.69■■□□□ 1.06
LSM14A-208ENST00000590416 NARFQ9UHQ1 456 aa21.69■■□□□ 1.06
LSM14A-208ENST00000590416 CCDC30Q5VVM6 783 aa21.68■■□□□ 1.06
LSM14A-208ENST00000590416 KIF6Q6ZMV9 814 aa21.68■■□□□ 1.06
LSM14A-208ENST00000590416 SCN7AQ01118 1682 aa21.68■■□□□ 1.06
LSM14A-208ENST00000590416 BCORQ6W2J9 1755 aa21.67■■□□□ 1.06
LSM14A-208ENST00000590416 LRP5O75197 1615 aa21.67■■□□□ 1.06
LSM14A-208ENST00000590416 GYS1P13807 737 aa21.67■■□□□ 1.06
LSM14A-208ENST00000590416 PROSER3Q2NL68 480 aa21.67■■□□□ 1.06
LSM14A-208ENST00000590416 DBF4Q9UBU7 674 aaPredicted RBP21.67■■□□□ 1.06
LSM14A-208ENST00000590416 AIMP1Q12904 312 aaKnown RBP21.66■■□□□ 1.06
LSM14A-208ENST00000590416 NLGN1Q8N2Q7 840 aa21.66■■□□□ 1.06
LSM14A-208ENST00000590416 STK31Q9BXU1 1019 aa21.66■■□□□ 1.06
LSM14A-208ENST00000590416 DDX21Q9NR30 783 aaKnown RBP eCLIP21.66■■□□□ 1.06
LSM14A-208ENST00000590416 ZBED9Q6R2W3 1325 aa21.65■■□□□ 1.06
LSM14A-208ENST00000590416 TCERG1O14776 1098 aaKnown RBP21.65■■□□□ 1.06
LSM14A-208ENST00000590416 PDIA6Q15084 440 aa21.65■■□□□ 1.06
LSM14A-208ENST00000590416 COL24A1Q17RW2 1714 aa21.64■■□□□ 1.06
LSM14A-208ENST00000590416 FKBP8Q14318 412 aa21.64■■□□□ 1.05
LSM14A-208ENST00000590416 CAMTA2O94983 1202 aa21.63■■□□□ 1.05
LSM14A-208ENST00000590416 MMP10P09238 476 aa21.63■■□□□ 1.05
LSM14A-208ENST00000590416 PTGER2P43116 358 aa21.63■■□□□ 1.05
LSM14A-208ENST00000590416 BICDL1Q6ZP65 573 aa21.63■■□□□ 1.05
LSM14A-208ENST00000590416 TTLL7Q6ZT98 887 aa21.63■■□□□ 1.05
LSM14A-208ENST00000590416 KLHL34Q8N239 644 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms