RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 FMNL2Q96PY5 1086 aa24.12■■□□□ 1.45
DDX39A-212ENST00000590260 RRP7AQ9Y3A4 280 aaKnown RBP24.12■■□□□ 1.45
DDX39A-212ENST00000590260 RIPK4P57078 832 aa24.11■■□□□ 1.45
DDX39A-212ENST00000590260 WDR43Q15061 677 aaKnown RBP eCLIP24.11■■□□□ 1.45
DDX39A-212ENST00000590260 USP42Q9H9J4 1324 aaKnown RBP24.1■■□□□ 1.45
DDX39A-212ENST00000590260 RUNDC1Q96C34 613 aa24.1■■□□□ 1.45
DDX39A-212ENST00000590260 COL15A1P39059 1388 aa24.09■■□□□ 1.45
DDX39A-212ENST00000590260 RFC4P35249 363 aa24.09■■□□□ 1.45
DDX39A-212ENST00000590260 USP16Q9Y5T5 823 aa24.09■■□□□ 1.45
DDX39A-212ENST00000590260 KIAA1551Q9HCM1 1747 aa24.08■■□□□ 1.45
DDX39A-212ENST00000590260 TRIM35Q9UPQ4 493 aa24.08■■□□□ 1.45
DDX39A-212ENST00000590260 LAMB4A4D0S4 1761 aa24.07■■□□□ 1.44
DDX39A-212ENST00000590260 A1BGP04217 495 aa24.07■■□□□ 1.44
DDX39A-212ENST00000590260 MMP10P09238 476 aa24.07■■□□□ 1.44
DDX39A-212ENST00000590260 CANXP27824 592 aaKnown RBP24.07■■□□□ 1.44
DDX39A-212ENST00000590260 FKBP8Q14318 412 aa24.07■■□□□ 1.44
DDX39A-212ENST00000590260 KLHL34Q8N239 644 aa24.07■■□□□ 1.44
DDX39A-212ENST00000590260 KIF13BQ9NQT8 1826 aa24.06■■□□□ 1.44
DDX39A-212ENST00000590260 EIF5P55010 431 aaKnown RBP24.06■■□□□ 1.44
DDX39A-212ENST00000590260 BCL2L12Q9HB09 334 aa24.06■■□□□ 1.44
DDX39A-212ENST00000590260 STARD3NLO95772 234 aa24.05■■□□□ 1.44
DDX39A-212ENST00000590260 TEX13AQ9BXU3 409 aaPredicted RBP24.05■■□□□ 1.44
DDX39A-212ENST00000590260 PIP4K2AP48426 406 aaPredicted RBP24.04■■□□□ 1.44
DDX39A-212ENST00000590260 NEUROD2Q15784 382 aa24.04■■□□□ 1.44
DDX39A-212ENST00000590260 USPL1Q5W0Q7 1092 aa24.04■■□□□ 1.44
DDX39A-212ENST00000590260 NLGN1Q8N2Q7 840 aa24.04■■□□□ 1.44
DDX39A-212ENST00000590260 SCN7AQ01118 1682 aa24.04■■□□□ 1.44
DDX39A-212ENST00000590260 EIF4A1P60842 406 aaKnown RBP24.03■■□□□ 1.44
DDX39A-212ENST00000590260 DDR1Q08345 913 aa24.03■■□□□ 1.44
DDX39A-212ENST00000590260 NARFQ9UHQ1 456 aa24.03■■□□□ 1.44
DDX39A-212ENST00000590260 SNRPA1P09661 255 aaKnown RBP24.02■■□□□ 1.44
DDX39A-212ENST00000590260 CD2APQ9Y5K6 639 aa24.02■■□□□ 1.44
DDX39A-212ENST00000590260 NBPF26B4DH59 902 aa24.01■■□□□ 1.43
DDX39A-212ENST00000590260 TM4SF1P30408 202 aa24.01■■□□□ 1.43
DDX39A-212ENST00000590260 NBPF10Q6P3W6 841 aaKnown RBP24.01■■□□□ 1.43
DDX39A-212ENST00000590260 NBPF15Q8N660 670 aa24.01■■□□□ 1.43
DDX39A-212ENST00000590260 PNISRQ8TF01 805 aaKnown RBP24.01■■□□□ 1.43
DDX39A-212ENST00000590260 BCORQ6W2J9 1755 aa24.01■■□□□ 1.43
DDX39A-212ENST00000590260 ANP32CO43423 234 aa24■■□□□ 1.43
DDX39A-212ENST00000590260 IL6STP40189 918 aaPredicted RBP24■■□□□ 1.43
DDX39A-212ENST00000590260 C10orf71Q711Q0 1435 aa24■■□□□ 1.43
DDX39A-212ENST00000590260 NRXN2Q9P2S2 1712 aa23.99■■□□□ 1.43
DDX39A-212ENST00000590260 GIGYF1O75420 1035 aaPredicted RBP23.99■■□□□ 1.43
DDX39A-212ENST00000590260 AFDNP55196 1824 aaKnown RBP23.98■■□□□ 1.43
DDX39A-212ENST00000590260 APAF1O14727 1248 aa23.98■■□□□ 1.43
DDX39A-212ENST00000590260 POLRMTO00411 1230 aaKnown RBP23.97■■□□□ 1.43
DDX39A-212ENST00000590260 LMOD3Q0VAK6 560 aa23.97■■□□□ 1.43
DDX39A-212ENST00000590260 TBC1D2BQ9UPU7 963 aa23.97■■□□□ 1.43
DDX39A-212ENST00000590260 N4BP2Q86UW6 1770 aaPredicted RBP23.96■■□□□ 1.43
DDX39A-212ENST00000590260 UTRNP46939 3433 aa23.96■■□□□ 1.43
DDX39A-212ENST00000590260 PXDNLA1KZ92 1463 aa23.96■■□□□ 1.43
DDX39A-212ENST00000590260 ZPR1O75312 459 aa23.96■■□□□ 1.43
DDX39A-212ENST00000590260 NFIXQ14938 502 aa23.96■■□□□ 1.43
DDX39A-212ENST00000590260 TSPYL4Q9UJ04 414 aa23.96■■□□□ 1.43
DDX39A-212ENST00000590260 YBX3P16989 372 aaKnown RBP eCLIP23.95■■□□□ 1.42
DDX39A-212ENST00000590260 MRS2Q9HD23 443 aa23.95■■□□□ 1.42
DDX39A-212ENST00000590260 GOLGB1Q14789 3259 aaKnown RBP23.95■■□□□ 1.42
DDX39A-212ENST00000590260 CHL1O00533 1208 aa23.94■■□□□ 1.42
DDX39A-212ENST00000590260 CAMTA2O94983 1202 aa23.94■■□□□ 1.42
DDX39A-212ENST00000590260 BABAM1Q9NWV8 329 aa23.94■■□□□ 1.42
DDX39A-212ENST00000590260 ZNF330Q9Y3S2 320 aaPredicted RBP23.94■■□□□ 1.42
DDX39A-212ENST00000590260 A0A087WZG4 1122 aa23.93■■□□□ 1.42
DDX39A-212ENST00000590260 SENP3-EIF4A1A0A087X0R7 540 aa23.93■■□□□ 1.42
DDX39A-212ENST00000590260 PARP3Q9Y6F1 533 aa23.93■■□□□ 1.42
DDX39A-212ENST00000590260 KRT24Q2M2I5 525 aa23.92■■□□□ 1.42
DDX39A-212ENST00000590260 BRCA1P38398 1863 aaKnown RBP23.92■■□□□ 1.42
DDX39A-212ENST00000590260 TBC1D9BQ66K14 1250 aa23.91■■□□□ 1.42
DDX39A-212ENST00000590260 ZNF853P0CG23 659 aa23.9■■□□□ 1.42
DDX39A-212ENST00000590260 DZIP3Q86Y13 1208 aaKnown RBP23.9■■□□□ 1.42
DDX39A-212ENST00000590260 LRP10Q7Z4F1 713 aa23.89■■□□□ 1.41
DDX39A-212ENST00000590260 WWC3Q9ULE0 1092 aa23.89■■□□□ 1.41
DDX39A-212ENST00000590260 KCNA3P22001 575 aa23.88■■□□□ 1.41
DDX39A-212ENST00000590260 PDIA6Q15084 440 aa23.88■■□□□ 1.41
DDX39A-212ENST00000590260 GPR162Q16538 588 aa23.88■■□□□ 1.41
DDX39A-212ENST00000590260 CARMIL3Q8ND23 1372 aa23.88■■□□□ 1.41
DDX39A-212ENST00000590260 BICDL1Q6ZP65 573 aa23.87■■□□□ 1.41
DDX39A-212ENST00000590260 PELP1Q8IZL8 1130 aaKnown RBP23.87■■□□□ 1.41
DDX39A-212ENST00000590260 LAS1LQ9Y4W2 734 aaKnown RBP23.87■■□□□ 1.41
DDX39A-212ENST00000590260 ANKRD31Q8N7Z5 1873 aa23.86■■□□□ 1.41
DDX39A-212ENST00000590260 A0A0G2JLW4 131 aa23.86■■□□□ 1.41
DDX39A-212ENST00000590260 SERPINB2P05120 415 aa23.86■■□□□ 1.41
DDX39A-212ENST00000590260 CFAP44Q96MT7 982 aa23.86■■□□□ 1.41
DDX39A-212ENST00000590260 DCAF8L1A6NGE4 600 aa23.85■■□□□ 1.41
DDX39A-212ENST00000590260 DPEP1P16444 411 aa23.85■■□□□ 1.41
DDX39A-212ENST00000590260 TGFB2P61812 414 aa23.85■■□□□ 1.41
DDX39A-212ENST00000590260 MBIPQ9NS73 344 aa23.85■■□□□ 1.41
DDX39A-212ENST00000590260 HLFQ16534 295 aa23.84■■□□□ 1.41
DDX39A-212ENST00000590260 PROSER3Q2NL68 480 aa23.84■■□□□ 1.41
DDX39A-212ENST00000590260 TTLL7Q6ZT98 887 aa23.84■■□□□ 1.41
DDX39A-212ENST00000590260 CHD4Q14839 1912 aa23.83■■□□□ 1.41
DDX39A-212ENST00000590260 MYL6BP14649 208 aa23.83■■□□□ 1.41
DDX39A-212ENST00000590260 ANXA1P04083 346 aa23.82■■□□□ 1.4
DDX39A-212ENST00000590260 EIF2S2P20042 333 aaKnown RBP23.82■■□□□ 1.4
DDX39A-212ENST00000590260 NGEFQ8N5V2 710 aa23.82■■□□□ 1.4
DDX39A-212ENST00000590260 DLEC1Q9Y238 1755 aa23.82■■□□□ 1.4
DDX39A-212ENST00000590260 NUP98P52948 1817 aa23.82■■□□□ 1.4
DDX39A-212ENST00000590260 CHRNA5P30532 468 aa23.81■■□□□ 1.4
DDX39A-212ENST00000590260 IFT57Q9NWB7 429 aa23.81■■□□□ 1.4
DDX39A-212ENST00000590260 ERBB4Q15303 1308 aa23.81■■□□□ 1.4
DDX39A-212ENST00000590260 COL11A2P13942 1736 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms