RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 PGBD3Q8N328 593 aa6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 C1orf216Q8TAB5 229 aa6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 TSPAN10Q9H1Z9 355 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 ZMIZ1Q9ULJ6 1067 aa6.9□□□□□ -1.3
HMGN1P30-201ENST00000589286 ATAD2Q6PL18 1390 aa6.9□□□□□ -1.31
HMGN1P30-201ENST00000589286 H3BM21 787 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 TATP17735 454 aaPredicted RBP6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 NOS2P35228 1153 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 VEGFBP49765 207 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 TEAD4Q15561 434 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 TBCELQ5QJ74 424 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 STK32AQ8WU08 396 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 CHMP7Q8WUX9 453 aaPredicted RBP6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 SCG3Q8WXD2 468 aaKnown RBP6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 IRF7Q92985 503 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 L3MBTL2Q969R5 705 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 GMCL1Q96IK5 515 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 GPAMQ9HCL2 828 aa6.89□□□□□ -1.31
HMGN1P30-201ENST00000589286 CDC14CA4D256 554 aa6.88□□□□□ -1.31
HMGN1P30-201ENST00000589286 WFS1O76024 890 aa6.88□□□□□ -1.31
HMGN1P30-201ENST00000589286 MSX1P28360 303 aa6.88□□□□□ -1.31
HMGN1P30-201ENST00000589286 FOXR1Q6PIV2 292 aa6.88□□□□□ -1.31
HMGN1P30-201ENST00000589286 ZDHHC3Q9NYG2 299 aa6.88□□□□□ -1.31
HMGN1P30-201ENST00000589286 PARP3Q9Y6F1 533 aa6.88□□□□□ -1.31
HMGN1P30-201ENST00000589286 USP3Q9Y6I4 520 aa6.88□□□□□ -1.31
HMGN1P30-201ENST00000589286 IGFBP4P22692 258 aa6.87□□□□□ -1.31
HMGN1P30-201ENST00000589286 EFHC2Q5JST6 749 aa6.87□□□□□ -1.31
HMGN1P30-201ENST00000589286 TMEM164Q5U3C3 297 aa6.87□□□□□ -1.31
HMGN1P30-201ENST00000589286 SV2AQ7L0J3 742 aa6.87□□□□□ -1.31
HMGN1P30-201ENST00000589286 TRIM22Q8IYM9 498 aa6.87□□□□□ -1.31
HMGN1P30-201ENST00000589286 STAG2Q8N3U4 1231 aa6.87□□□□□ -1.31
HMGN1P30-201ENST00000589286 VTI1AQ96AJ9 217 aa6.87□□□□□ -1.31
HMGN1P30-201ENST00000589286 LGR5O75473 907 aa6.86□□□□□ -1.31
HMGN1P30-201ENST00000589286 LBRQ14739 615 aaKnown RBP6.86□□□□□ -1.31
HMGN1P30-201ENST00000589286 ARSJQ5FYB0 599 aaPredicted RBP6.86□□□□□ -1.31
HMGN1P30-201ENST00000589286 TREML4Q6UXN2 200 aa6.86□□□□□ -1.31
HMGN1P30-201ENST00000589286 BICDL1Q6ZP65 573 aa6.86□□□□□ -1.31
HMGN1P30-201ENST00000589286 ZNF295-AS1Q8N0V1 137 aa6.86□□□□□ -1.31
HMGN1P30-201ENST00000589286 VWA5B2Q8N398 1253 aa6.86□□□□□ -1.31
HMGN1P30-201ENST00000589286 NANOS1Q8WY41 292 aaKnown RBP6.86□□□□□ -1.31
HMGN1P30-201ENST00000589286 NEUROD4Q9HD90 331 aa6.86□□□□□ -1.31
HMGN1P30-201ENST00000589286 EML1O00423 815 aa6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 FOXO3O43524 673 aa6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 C21orf2O43822 256 aa6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 WEE1P30291 646 aa6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 HIRAP54198 1017 aaPredicted RBP6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 NFX1Q12986 1120 aaKnown RBP6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 ZDHHC1Q8WTX9 485 aa6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 C2orf49Q9BVC5 232 aaPredicted RBP6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 NUCKS1Q9H1E3 243 aaKnown RBP6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 RUBCNLQ9H714 662 aa6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 GJA3Q9Y6H8 435 aa6.85□□□□□ -1.31
HMGN1P30-201ENST00000589286 PRMT3O60678 531 aa6.84□□□□□ -1.31
HMGN1P30-201ENST00000589286 VSIG8P0DPA2 414 aa6.84□□□□□ -1.31
HMGN1P30-201ENST00000589286 PDE4CQ08493 712 aa6.84□□□□□ -1.31
HMGN1P30-201ENST00000589286 C1orf53Q5VUE5 145 aa6.84□□□□□ -1.31
HMGN1P30-201ENST00000589286 CLP1Q92989 425 aaKnown RBP6.84□□□□□ -1.31
HMGN1P30-201ENST00000589286 TRERF1Q96PN7 1200 aa6.84□□□□□ -1.31
HMGN1P30-201ENST00000589286 CRISPLD1Q9H336 500 aa6.84□□□□□ -1.31
HMGN1P30-201ENST00000589286 CUEDC1Q9NWM3 386 aaPredicted RBP6.84□□□□□ -1.31
HMGN1P30-201ENST00000589286 GPC6Q9Y625 555 aaPredicted RBP6.84□□□□□ -1.31
HMGN1P30-201ENST00000589286 ATP4AP20648 1035 aa6.83□□□□□ -1.32
HMGN1P30-201ENST00000589286 TXLNAP40222 546 aa6.83□□□□□ -1.32
HMGN1P30-201ENST00000589286 FAM69CQ0P6D2 419 aa6.83□□□□□ -1.32
HMGN1P30-201ENST00000589286 DBN1Q16643 649 aa6.83□□□□□ -1.32
HMGN1P30-201ENST00000589286 FIGNL1Q6PIW4 674 aa6.83□□□□□ -1.32
HMGN1P30-201ENST00000589286 ZNF837Q96EG3 531 aaPredicted RBP6.83□□□□□ -1.32
HMGN1P30-201ENST00000589286 PRIMPOLQ96LW4 560 aa6.83□□□□□ -1.32
HMGN1P30-201ENST00000589286 HCN4Q9Y3Q4 1203 aa6.83□□□□□ -1.32
HMGN1P30-201ENST00000589286 A0A1W2PNR3 127 aa6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 HIF1AQ16665 826 aa6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 SH3PXD2AQ5TCZ1 1133 aa6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 NLRP8Q86W28 1048 aa6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 RHPN1Q8TCX5 695 aa6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 GTPBP3Q969Y2 492 aaKnown RBP6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 NGLY1Q96IV0 654 aa6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 PHACTR1Q9C0D0 580 aa6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 PHF24Q9UPV7 400 aa6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 USTQ9Y2C2 406 aa6.82□□□□□ -1.32
HMGN1P30-201ENST00000589286 ATP2B4P23634 1241 aa6.81□□□□□ -1.32
HMGN1P30-201ENST00000589286 POTEAQ6S8J7 498 aa6.81□□□□□ -1.32
HMGN1P30-201ENST00000589286 ALDH16A1Q8IZ83 802 aa6.81□□□□□ -1.32
HMGN1P30-201ENST00000589286 ANKIB1Q9P2G1 1089 aa6.81□□□□□ -1.32
HMGN1P30-201ENST00000589286 ERBB4Q15303 1308 aa6.8□□□□□ -1.32
HMGN1P30-201ENST00000589286 FKBP5Q13451 457 aaPredicted RBP6.8□□□□□ -1.32
HMGN1P30-201ENST00000589286 OCLNQ16625 522 aa6.8□□□□□ -1.32
HMGN1P30-201ENST00000589286 B4GALNT3Q6L9W6 998 aa6.8□□□□□ -1.32
HMGN1P30-201ENST00000589286 ZIC5Q96T25 663 aa6.8□□□□□ -1.32
HMGN1P30-201ENST00000589286 CXXC1Q9P0U4 656 aaPredicted RBP6.8□□□□□ -1.32
HMGN1P30-201ENST00000589286 PTCD1O75127 700 aaKnown RBP6.79□□□□□ -1.32
HMGN1P30-201ENST00000589286 GMPRP36959 345 aa6.79□□□□□ -1.32
HMGN1P30-201ENST00000589286 RTN1Q16799 776 aa6.79□□□□□ -1.32
HMGN1P30-201ENST00000589286 PCDHGC4Q9Y5F7 938 aa6.79□□□□□ -1.32
HMGN1P30-201ENST00000589286 TMEM88BA6NKF7 163 aa6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 GPR25O00155 361 aa6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 ATXN7O15265 892 aaPredicted RBP6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 LRRC69Q6ZNQ3 347 aa6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 GPR161Q8N6U8 529 aaKnown RBP6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 RETREG2Q8NC44 543 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms