RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
PTPN2-208ENST00000589216 AFDNP55196 1824 aaKnown RBP13.08□□□□□ -0.32
PTPN2-208ENST00000589216 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
PTPN2-208ENST00000589216 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
PTPN2-208ENST00000589216 HTATSF1O43719 755 aaKnown RBP13.07□□□□□ -0.32
PTPN2-208ENST00000589216 GYS1P13807 737 aa13.07□□□□□ -0.32
PTPN2-208ENST00000589216 HMGB2P26583 209 aaKnown RBP13.07□□□□□ -0.32
PTPN2-208ENST00000589216 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
PTPN2-208ENST00000589216 MIS18AQ9NYP9 233 aa13.07□□□□□ -0.32
PTPN2-208ENST00000589216 ADAMTS8Q9UP79 889 aa13.07□□□□□ -0.32
PTPN2-208ENST00000589216 C10orf71Q711Q0 1435 aa13.06□□□□□ -0.32
PTPN2-208ENST00000589216 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
PTPN2-208ENST00000589216 NRXN2Q9P2S2 1712 aa13.06□□□□□ -0.32
PTPN2-208ENST00000589216 NEFMP07197 916 aa13.06□□□□□ -0.32
PTPN2-208ENST00000589216 TMPOP42166 694 aaKnown RBP13.06□□□□□ -0.32
PTPN2-208ENST00000589216 WDR43Q15061 677 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN2-208ENST00000589216 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
PTPN2-208ENST00000589216 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
PTPN2-208ENST00000589216 MMP10P09238 476 aa13.05□□□□□ -0.32
PTPN2-208ENST00000589216 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
PTPN2-208ENST00000589216 CANXP27824 592 aaKnown RBP13.04□□□□□ -0.32
PTPN2-208ENST00000589216 RFC4P35249 363 aa13.04□□□□□ -0.32
PTPN2-208ENST00000589216 RIPK4P57078 832 aa13.04□□□□□ -0.32
PTPN2-208ENST00000589216 DDR1Q08345 913 aa13.04□□□□□ -0.32
PTPN2-208ENST00000589216 FKBP8Q14318 412 aa13.04□□□□□ -0.32
PTPN2-208ENST00000589216 UTRNP46939 3433 aa13.04□□□□□ -0.32
PTPN2-208ENST00000589216 PXDNLA1KZ92 1463 aa13.04□□□□□ -0.32
PTPN2-208ENST00000589216 TAF7Q15545 349 aaPredicted RBP13.03□□□□□ -0.32
PTPN2-208ENST00000589216 NEUROD2Q15784 382 aa13.03□□□□□ -0.32
PTPN2-208ENST00000589216 USPL1Q5W0Q7 1092 aa13.03□□□□□ -0.32
PTPN2-208ENST00000589216 RUNDC1Q96C34 613 aa13.03□□□□□ -0.32
PTPN2-208ENST00000589216 PNNQ9H307 717 aaKnown RBP13.03□□□□□ -0.32
PTPN2-208ENST00000589216 BCL2L12Q9HB09 334 aa13.03□□□□□ -0.32
PTPN2-208ENST00000589216 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
PTPN2-208ENST00000589216 ANKRD31Q8N7Z5 1873 aa13.02□□□□□ -0.32
PTPN2-208ENST00000589216 CHD4Q14839 1912 aa13.02□□□□□ -0.32
PTPN2-208ENST00000589216 A1BGP04217 495 aa13.02□□□□□ -0.33
PTPN2-208ENST00000589216 EIF5P55010 431 aaKnown RBP13.02□□□□□ -0.33
PTPN2-208ENST00000589216 TRIM35Q9UPQ4 493 aa13.02□□□□□ -0.33
PTPN2-208ENST00000589216 COL11A2P13942 1736 aaPredicted RBP13.02□□□□□ -0.33
PTPN2-208ENST00000589216 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
PTPN2-208ENST00000589216 SENP3-EIF4A1A0A087X0R7 540 aa13.01□□□□□ -0.33
PTPN2-208ENST00000589216 STARD3NLO95772 234 aa13.01□□□□□ -0.33
PTPN2-208ENST00000589216 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
PTPN2-208ENST00000589216 CARMIL3Q8ND23 1372 aa13□□□□□ -0.33
PTPN2-208ENST00000589216 NBPF26B4DH59 902 aa13□□□□□ -0.33
PTPN2-208ENST00000589216 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
PTPN2-208ENST00000589216 NBPF10Q6P3W6 841 aaKnown RBP13□□□□□ -0.33
PTPN2-208ENST00000589216 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
PTPN2-208ENST00000589216 NBPF15Q8N660 670 aa13□□□□□ -0.33
PTPN2-208ENST00000589216 NARFQ9UHQ1 456 aa13□□□□□ -0.33
PTPN2-208ENST00000589216 WWC3Q9ULE0 1092 aa13□□□□□ -0.33
PTPN2-208ENST00000589216 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
PTPN2-208ENST00000589216 ANP32CO43423 234 aa12.99□□□□□ -0.33
PTPN2-208ENST00000589216 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
PTPN2-208ENST00000589216 YBX3P16989 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTPN2-208ENST00000589216 TEX13AQ9BXU3 409 aaPredicted RBP12.99□□□□□ -0.33
PTPN2-208ENST00000589216 CD2APQ9Y5K6 639 aa12.99□□□□□ -0.33
PTPN2-208ENST00000589216 NUP98P52948 1817 aa12.98□□□□□ -0.33
PTPN2-208ENST00000589216 APAF1O14727 1248 aa12.98□□□□□ -0.33
PTPN2-208ENST00000589216 ZPR1O75312 459 aa12.98□□□□□ -0.33
PTPN2-208ENST00000589216 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
PTPN2-208ENST00000589216 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
PTPN2-208ENST00000589216 LMOD3Q0VAK6 560 aa12.98□□□□□ -0.33
PTPN2-208ENST00000589216 NFIXQ14938 502 aa12.98□□□□□ -0.33
PTPN2-208ENST00000589216 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
PTPN2-208ENST00000589216 MRS2Q9HD23 443 aa12.98□□□□□ -0.33
PTPN2-208ENST00000589216 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
PTPN2-208ENST00000589216 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
PTPN2-208ENST00000589216 TM4SF1P30408 202 aa12.97□□□□□ -0.33
PTPN2-208ENST00000589216 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
PTPN2-208ENST00000589216 PNISRQ8TF01 805 aaKnown RBP12.97□□□□□ -0.33
PTPN2-208ENST00000589216 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
PTPN2-208ENST00000589216 ARFGEF1Q9Y6D6 1849 aa12.97□□□□□ -0.33
PTPN2-208ENST00000589216 CAMTA2O94983 1202 aa12.96□□□□□ -0.33
PTPN2-208ENST00000589216 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.34
PTPN2-208ENST00000589216 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
PTPN2-208ENST00000589216 ANKRD36CQ5JPF3 1778 aa12.95□□□□□ -0.34
PTPN2-208ENST00000589216 GPR162Q16538 588 aa12.95□□□□□ -0.34
PTPN2-208ENST00000589216 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
PTPN2-208ENST00000589216 BICDL1Q6ZP65 573 aa12.95□□□□□ -0.34
PTPN2-208ENST00000589216 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
PTPN2-208ENST00000589216 A0A087WZG4 1122 aa12.94□□□□□ -0.34
PTPN2-208ENST00000589216 CHL1O00533 1208 aa12.94□□□□□ -0.34
PTPN2-208ENST00000589216 A0A0G2JLW4 131 aa12.93□□□□□ -0.34
PTPN2-208ENST00000589216 DPEP1P16444 411 aa12.93□□□□□ -0.34
PTPN2-208ENST00000589216 PROSER3Q2NL68 480 aa12.93□□□□□ -0.34
PTPN2-208ENST00000589216 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
PTPN2-208ENST00000589216 ANXA1P04083 346 aa12.92□□□□□ -0.34
PTPN2-208ENST00000589216 SERPINB2P05120 415 aa12.92□□□□□ -0.34
PTPN2-208ENST00000589216 LRP10Q7Z4F1 713 aa12.92□□□□□ -0.34
PTPN2-208ENST00000589216 MBIPQ9NS73 344 aa12.92□□□□□ -0.34
PTPN2-208ENST00000589216 BABAM1Q9NWV8 329 aa12.92□□□□□ -0.34
PTPN2-208ENST00000589216 ARFGEF2Q9Y6D5 1785 aa12.92□□□□□ -0.34
PTPN2-208ENST00000589216 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 MYL6BP14649 208 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 KCNA3P22001 575 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 YY1P25490 414 aa12.91□□□□□ -0.34
PTPN2-208ENST00000589216 CHRNA5P30532 468 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms