RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PRAMEF22A3QJZ6 481 aa26.47■■□□□ 1.83
DDX39A-207ENST00000588542 EIF4A1P60842 406 aaKnown RBP26.47■■□□□ 1.83
DDX39A-207ENST00000588542 TEX13AQ9BXU3 409 aaPredicted RBP26.47■■□□□ 1.83
DDX39A-207ENST00000588542 TSPYL4Q9UJ04 414 aa26.47■■□□□ 1.83
DDX39A-207ENST00000588542 ATF5Q9Y2D1 282 aaPredicted RBP26.47■■□□□ 1.83
DDX39A-207ENST00000588542 MSH5O43196 834 aa26.46■■□□□ 1.83
DDX39A-207ENST00000588542 CHL1O00533 1208 aa26.45■■□□□ 1.82
DDX39A-207ENST00000588542 STARD3NLO95772 234 aa26.45■■□□□ 1.82
DDX39A-207ENST00000588542 SNRPA1P09661 255 aaKnown RBP26.45■■□□□ 1.82
DDX39A-207ENST00000588542 CCDC27Q2M243 656 aa26.45■■□□□ 1.82
DDX39A-207ENST00000588542 ZBTB1Q9Y2K1 713 aa26.45■■□□□ 1.82
DDX39A-207ENST00000588542 USP16Q9Y5T5 823 aa26.45■■□□□ 1.82
DDX39A-207ENST00000588542 PTGER2P43116 358 aa26.44■■□□□ 1.82
DDX39A-207ENST00000588542 NCBP3Q53F19 620 aaKnown RBP26.44■■□□□ 1.82
DDX39A-207ENST00000588542 ADRA2BP18089 450 aa26.43■■□□□ 1.82
DDX39A-207ENST00000588542 TRAPPC3LQ5T215 181 aa26.43■■□□□ 1.82
DDX39A-207ENST00000588542 ARHGEF1Q92888 912 aaKnown RBP26.43■■□□□ 1.82
DDX39A-207ENST00000588542 SGIP1Q9BQI5 828 aa26.43■■□□□ 1.82
DDX39A-207ENST00000588542 SOS1Q07889 1333 aaPredicted RBP26.42■■□□□ 1.82
DDX39A-207ENST00000588542 ZNF853P0CG23 659 aa26.42■■□□□ 1.82
DDX39A-207ENST00000588542 LAS1LQ9Y4W2 734 aaKnown RBP26.42■■□□□ 1.82
DDX39A-207ENST00000588542 GIGYF1O75420 1035 aaPredicted RBP26.41■■□□□ 1.82
DDX39A-207ENST00000588542 WWC1Q8IX03 1113 aa26.41■■□□□ 1.82
DDX39A-207ENST00000588542 CFAP44Q96MT7 982 aa26.41■■□□□ 1.82
DDX39A-207ENST00000588542 A1BGP04217 495 aa26.4■■□□□ 1.82
DDX39A-207ENST00000588542 CANXP27824 592 aaKnown RBP26.39■■□□□ 1.82
DDX39A-207ENST00000588542 CALD1Q05682 793 aaKnown RBP26.38■■□□□ 1.81
DDX39A-207ENST00000588542 MSL1Q68DK7 614 aa26.38■■□□□ 1.81
DDX39A-207ENST00000588542 IFT57Q9NWB7 429 aa26.38■■□□□ 1.81
DDX39A-207ENST00000588542 COL15A1P39059 1388 aa26.37■■□□□ 1.81
DDX39A-207ENST00000588542 EIF5P55010 431 aaKnown RBP26.37■■□□□ 1.81
DDX39A-207ENST00000588542 MBIPQ9NS73 344 aa26.37■■□□□ 1.81
DDX39A-207ENST00000588542 SALL2Q9Y467 1007 aaPredicted RBP26.37■■□□□ 1.81
DDX39A-207ENST00000588542 RFC4P35249 363 aa26.36■■□□□ 1.81
DDX39A-207ENST00000588542 GNAI1P63096 354 aa26.35■■□□□ 1.81
DDX39A-207ENST00000588542 IL6STP40189 918 aaPredicted RBP26.34■■□□□ 1.81
DDX39A-207ENST00000588542 PIP4K2AP48426 406 aaPredicted RBP26.34■■□□□ 1.81
DDX39A-207ENST00000588542 KRT24Q2M2I5 525 aa26.34■■□□□ 1.81
DDX39A-207ENST00000588542 SRP68Q9UHB9 627 aaKnown RBP26.34■■□□□ 1.81
DDX39A-207ENST00000588542 USP42Q9H9J4 1324 aaKnown RBP26.34■■□□□ 1.81
DDX39A-207ENST00000588542 NBPF26B4DH59 902 aa26.33■■□□□ 1.81
DDX39A-207ENST00000588542 GYS1P13807 737 aa26.33■■□□□ 1.81
DDX39A-207ENST00000588542 NBPF10Q6P3W6 841 aaKnown RBP26.33■■□□□ 1.81
DDX39A-207ENST00000588542 NBPF15Q8N660 670 aa26.33■■□□□ 1.81
DDX39A-207ENST00000588542 NGEFQ8N5V2 710 aa26.32■■□□□ 1.8
DDX39A-207ENST00000588542 IL16Q14005 1332 aa26.32■■□□□ 1.8
DDX39A-207ENST00000588542 SCN7AQ01118 1682 aa26.31■■□□□ 1.8
DDX39A-207ENST00000588542 BCORQ6W2J9 1755 aa26.31■■□□□ 1.8
DDX39A-207ENST00000588542 POLD1P28340 1107 aa26.3■■□□□ 1.8
DDX39A-207ENST00000588542 WDR63Q8IWG1 891 aa26.3■■□□□ 1.8
DDX39A-207ENST00000588542 NARFQ9UHQ1 456 aa26.3■■□□□ 1.8
DDX39A-207ENST00000588542 ARXQ96QS3 562 aa26.29■■□□□ 1.8
DDX39A-207ENST00000588542 PPP1R1BQ9UD71 204 aaPredicted RBP26.29■■□□□ 1.8
DDX39A-207ENST00000588542 USPL1Q5W0Q7 1092 aa26.28■■□□□ 1.8
DDX39A-207ENST00000588542 ZNF330Q9Y3S2 320 aaPredicted RBP26.28■■□□□ 1.8
DDX39A-207ENST00000588542 A0A087WZG4 1122 aa26.27■■□□□ 1.8
DDX39A-207ENST00000588542 ZPR1O75312 459 aa26.27■■□□□ 1.8
DDX39A-207ENST00000588542 FKBP8Q14318 412 aa26.27■■□□□ 1.8
DDX39A-207ENST00000588542 NLGN1Q8N2Q7 840 aa26.27■■□□□ 1.8
DDX39A-207ENST00000588542 TSR2Q969E8 191 aaKnown RBP26.27■■□□□ 1.8
DDX39A-207ENST00000588542 BCL2L12Q9HB09 334 aa26.27■■□□□ 1.8
DDX39A-207ENST00000588542 ZNF521Q96K83 1311 aa26.27■■□□□ 1.8
DDX39A-207ENST00000588542 EIF2S2P20042 333 aaKnown RBP26.26■■□□□ 1.79
DDX39A-207ENST00000588542 ERBB4Q15303 1308 aa26.25■■□□□ 1.79
DDX39A-207ENST00000588542 HOXB7P09629 217 aa26.25■■□□□ 1.79
DDX39A-207ENST00000588542 PDIA6Q15084 440 aa26.25■■□□□ 1.79
DDX39A-207ENST00000588542 TBC1D2BQ9UPU7 963 aa26.25■■□□□ 1.79
DDX39A-207ENST00000588542 DUSP27Q5VZP5 1158 aa26.24■■□□□ 1.79
DDX39A-207ENST00000588542 SPINK5Q9NQ38 1064 aaPredicted RBP26.24■■□□□ 1.79
DDX39A-207ENST00000588542 MMP10P09238 476 aa26.23■■□□□ 1.79
DDX39A-207ENST00000588542 DZIP3Q86Y13 1208 aaKnown RBP26.23■■□□□ 1.79
DDX39A-207ENST00000588542 C8orf58Q8NAV2 365 aa26.23■■□□□ 1.79
DDX39A-207ENST00000588542 AFDNP55196 1824 aaKnown RBP26.23■■□□□ 1.79
DDX39A-207ENST00000588542 CAMTA2O94983 1202 aa26.22■■□□□ 1.79
DDX39A-207ENST00000588542 LRP10Q7Z4F1 713 aa26.22■■□□□ 1.79
DDX39A-207ENST00000588542 NECTIN2Q92692 538 aa26.22■■□□□ 1.79
DDX39A-207ENST00000588542 NUP98P52948 1817 aa26.21■■□□□ 1.79
DDX39A-207ENST00000588542 MYL6BP14649 208 aa26.21■■□□□ 1.79
DDX39A-207ENST00000588542 TM4SF1P30408 202 aa26.21■■□□□ 1.79
DDX39A-207ENST00000588542 NPM2Q86SE8 214 aaKnown RBP26.21■■□□□ 1.79
DDX39A-207ENST00000588542 FHDC1Q9C0D6 1143 aaPredicted RBP26.21■■□□□ 1.79
DDX39A-207ENST00000588542 KIF13BQ9NQT8 1826 aa26.21■■□□□ 1.79
DDX39A-207ENST00000588542 FANCIQ9NVI1 1328 aa26.2■■□□□ 1.79
DDX39A-207ENST00000588542 PROSER3Q2NL68 480 aa26.2■■□□□ 1.78
DDX39A-207ENST00000588542 ELL2O00472 640 aaPredicted RBP26.19■■□□□ 1.78
DDX39A-207ENST00000588542 ANXA1P04083 346 aa26.19■■□□□ 1.78
DDX39A-207ENST00000588542 HDGFL1Q5TGJ6 251 aa26.19■■□□□ 1.78
DDX39A-207ENST00000588542 TSPYL6Q8N831 410 aa26.19■■□□□ 1.78
DDX39A-207ENST00000588542 NRXN2Q9P2S2 1712 aa26.19■■□□□ 1.78
DDX39A-207ENST00000588542 DDR1Q08345 913 aa26.18■■□□□ 1.78
DDX39A-207ENST00000588542 NFIXQ14938 502 aa26.17■■□□□ 1.78
DDX39A-207ENST00000588542 TTLL7Q6ZT98 887 aa26.17■■□□□ 1.78
DDX39A-207ENST00000588542 SYT17Q9BSW7 474 aa26.17■■□□□ 1.78
DDX39A-207ENST00000588542 DDX21Q9NR30 783 aaKnown RBP eCLIP26.17■■□□□ 1.78
DDX39A-207ENST00000588542 CHPF2Q9P2E5 772 aa26.16■■□□□ 1.78
DDX39A-207ENST00000588542 POLRMTO00411 1230 aaKnown RBP26.15■■□□□ 1.78
DDX39A-207ENST00000588542 TBC1D9BQ66K14 1250 aa26.15■■□□□ 1.78
DDX39A-207ENST00000588542 PARP3Q9Y6F1 533 aa26.15■■□□□ 1.78
DDX39A-207ENST00000588542 KIAA1551Q9HCM1 1747 aa26.14■■□□□ 1.77
DDX39A-207ENST00000588542 HLFQ16534 295 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms