RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 CYP19A1P11511 503 aaPredicted RBP15.44■□□□□ 0.06
SDHDP1-201ENST00000588055 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
SDHDP1-201ENST00000588055 LRP5O75197 1615 aa15.43■□□□□ 0.06
SDHDP1-201ENST00000588055 CHL1O00533 1208 aa15.43■□□□□ 0.06
SDHDP1-201ENST00000588055 EIF4A1P60842 406 aaKnown RBP15.43■□□□□ 0.06
SDHDP1-201ENST00000588055 SLC16A10Q8TF71 515 aa15.43■□□□□ 0.06
SDHDP1-201ENST00000588055 C4AP0C0L4 1744 aa15.43■□□□□ 0.06
SDHDP1-201ENST00000588055 IL16Q14005 1332 aa15.43■□□□□ 0.06
SDHDP1-201ENST00000588055 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
SDHDP1-201ENST00000588055 COL15A1P39059 1388 aa15.42■□□□□ 0.06
SDHDP1-201ENST00000588055 RPS6KA4O75676 772 aa15.42■□□□□ 0.06
SDHDP1-201ENST00000588055 RFC4P35249 363 aa15.42■□□□□ 0.06
SDHDP1-201ENST00000588055 TRAPPC3LQ5T215 181 aa15.42■□□□□ 0.06
SDHDP1-201ENST00000588055 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
SDHDP1-201ENST00000588055 ZBTB7AO95365 584 aa15.41■□□□□ 0.06
SDHDP1-201ENST00000588055 WDR63Q8IWG1 891 aa15.41■□□□□ 0.06
SDHDP1-201ENST00000588055 SPON1Q9HCB6 807 aa15.41■□□□□ 0.06
SDHDP1-201ENST00000588055 MBIPQ9NS73 344 aa15.41■□□□□ 0.06
SDHDP1-201ENST00000588055 ZBTB1Q9Y2K1 713 aa15.41■□□□□ 0.06
SDHDP1-201ENST00000588055 ZNF330Q9Y3S2 320 aaPredicted RBP15.41■□□□□ 0.06
SDHDP1-201ENST00000588055 GIGYF1O75420 1035 aaPredicted RBP15.4■□□□□ 0.06
SDHDP1-201ENST00000588055 CANXP27824 592 aaKnown RBP15.4■□□□□ 0.06
SDHDP1-201ENST00000588055 INTS5Q6P9B9 1019 aaKnown RBP15.4■□□□□ 0.06
SDHDP1-201ENST00000588055 COL23A1Q86Y22 540 aaPredicted RBP15.4■□□□□ 0.06
SDHDP1-201ENST00000588055 SOS1Q07889 1333 aaPredicted RBP15.4■□□□□ 0.06
SDHDP1-201ENST00000588055 A0A087WZG4 1122 aa15.39■□□□□ 0.05
SDHDP1-201ENST00000588055 HOXB7P09629 217 aa15.39■□□□□ 0.05
SDHDP1-201ENST00000588055 POLD1P28340 1107 aa15.39■□□□□ 0.05
SDHDP1-201ENST00000588055 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
SDHDP1-201ENST00000588055 MYH16Q9H6N6 1097 aa15.39■□□□□ 0.05
SDHDP1-201ENST00000588055 PRAMEF22A3QJZ6 481 aa15.38■□□□□ 0.05
SDHDP1-201ENST00000588055 ZPR1O75312 459 aa15.38■□□□□ 0.05
SDHDP1-201ENST00000588055 ZNF853P0CG23 659 aa15.38■□□□□ 0.05
SDHDP1-201ENST00000588055 IL6STP40189 918 aaPredicted RBP15.38■□□□□ 0.05
SDHDP1-201ENST00000588055 PDGFDQ9GZP0 370 aaPredicted RBP15.38■□□□□ 0.05
SDHDP1-201ENST00000588055 PPP1R1BQ9UD71 204 aaPredicted RBP15.38■□□□□ 0.05
SDHDP1-201ENST00000588055 USP16Q9Y5T5 823 aa15.38■□□□□ 0.05
SDHDP1-201ENST00000588055 ERBB4Q15303 1308 aa15.38■□□□□ 0.05
SDHDP1-201ENST00000588055 ARHGEF1Q92888 912 aaKnown RBP15.37■□□□□ 0.05
SDHDP1-201ENST00000588055 SCN7AQ01118 1682 aa15.37■□□□□ 0.05
SDHDP1-201ENST00000588055 A1BGP04217 495 aa15.36■□□□□ 0.05
SDHDP1-201ENST00000588055 EIF2S2P20042 333 aaKnown RBP15.36■□□□□ 0.05
SDHDP1-201ENST00000588055 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
SDHDP1-201ENST00000588055 AMIGO3Q86WK7 504 aa15.36■□□□□ 0.05
SDHDP1-201ENST00000588055 TSR2Q969E8 191 aaKnown RBP15.36■□□□□ 0.05
SDHDP1-201ENST00000588055 ARXQ96QS3 562 aa15.36■□□□□ 0.05
SDHDP1-201ENST00000588055 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
SDHDP1-201ENST00000588055 USP42Q9H9J4 1324 aaKnown RBP15.36■□□□□ 0.05
SDHDP1-201ENST00000588055 FANCIQ9NVI1 1328 aa15.36■□□□□ 0.05
SDHDP1-201ENST00000588055 GOLGA2Q08379 1002 aa15.35■□□□□ 0.05
SDHDP1-201ENST00000588055 DUSP27Q5VZP5 1158 aa15.35■□□□□ 0.05
SDHDP1-201ENST00000588055 MSL1Q68DK7 614 aa15.35■□□□□ 0.05
SDHDP1-201ENST00000588055 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
SDHDP1-201ENST00000588055 EIF5P55010 431 aaKnown RBP15.34■□□□□ 0.05
SDHDP1-201ENST00000588055 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
SDHDP1-201ENST00000588055 SMIM5Q71RC9 77 aa15.34■□□□□ 0.05
SDHDP1-201ENST00000588055 COL24A1Q17RW2 1714 aa15.34■□□□□ 0.05
SDHDP1-201ENST00000588055 E9PSI1 815 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 MYL6BP14649 208 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 PIP4K2AP48426 406 aaPredicted RBP15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 KRT24Q2M2I5 525 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 KIF6Q6ZMV9 814 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 NLGN1Q8N2Q7 840 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 NARFQ9UHQ1 456 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 ZNF652Q9Y2D9 606 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 ZNF521Q96K83 1311 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 SRCAPQ6ZRS2 3230 aa15.33■□□□□ 0.04
SDHDP1-201ENST00000588055 USPL1Q5W0Q7 1092 aa15.32■□□□□ 0.04
SDHDP1-201ENST00000588055 ELL2O00472 640 aaPredicted RBP15.31■□□□□ 0.04
SDHDP1-201ENST00000588055 GYS1P13807 737 aa15.31■□□□□ 0.04
SDHDP1-201ENST00000588055 TWISTNBQ3B726 338 aaPredicted RBP15.31■□□□□ 0.04
SDHDP1-201ENST00000588055 DBF4Q9UBU7 674 aaPredicted RBP15.31■□□□□ 0.04
SDHDP1-201ENST00000588055 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
SDHDP1-201ENST00000588055 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
SDHDP1-201ENST00000588055 CCDC30Q5VVM6 783 aa15.3■□□□□ 0.04
SDHDP1-201ENST00000588055 NBPF10Q6P3W6 841 aaKnown RBP15.3■□□□□ 0.04
SDHDP1-201ENST00000588055 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
SDHDP1-201ENST00000588055 STK31Q9BXU1 1019 aa15.3■□□□□ 0.04
SDHDP1-201ENST00000588055 CHPF2Q9P2E5 772 aa15.3■□□□□ 0.04
SDHDP1-201ENST00000588055 TBC1D2BQ9UPU7 963 aa15.3■□□□□ 0.04
SDHDP1-201ENST00000588055 MMP10P09238 476 aa15.29■□□□□ 0.04
SDHDP1-201ENST00000588055 PTGER2P43116 358 aa15.29■□□□□ 0.04
SDHDP1-201ENST00000588055 KLHL34Q8N239 644 aa15.29■□□□□ 0.04
SDHDP1-201ENST00000588055 C8orf58Q8NAV2 365 aa15.29■□□□□ 0.04
SDHDP1-201ENST00000588055 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
SDHDP1-201ENST00000588055 PARP3Q9Y6F1 533 aa15.29■□□□□ 0.04
SDHDP1-201ENST00000588055 HYPKQ9NX55 129 aa15.28■□□□□ 0.04
SDHDP1-201ENST00000588055 RGL2O15211 777 aa15.27■□□□□ 0.04
SDHDP1-201ENST00000588055 NPHP1O15259 732 aa15.27■□□□□ 0.04
SDHDP1-201ENST00000588055 CAMTA2O94983 1202 aa15.27■□□□□ 0.04
SDHDP1-201ENST00000588055 EXOSC9Q06265 439 aaKnown RBP15.27■□□□□ 0.04
SDHDP1-201ENST00000588055 FKBP8Q14318 412 aa15.27■□□□□ 0.04
SDHDP1-201ENST00000588055 SGIP1Q9BQI5 828 aa15.27■□□□□ 0.04
SDHDP1-201ENST00000588055 CARMIL3Q8ND23 1372 aa15.26■□□□□ 0.03
SDHDP1-201ENST00000588055 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
SDHDP1-201ENST00000588055 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
SDHDP1-201ENST00000588055 CLEC4GQ6UXB4 293 aa15.26■□□□□ 0.03
SDHDP1-201ENST00000588055 TSPYL6Q8N831 410 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms