RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
SMARCA4-213ENST00000587988 A1BGP04217 495 aa13.87□□□□□ -0.19
SMARCA4-213ENST00000587988 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-213ENST00000587988 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-213ENST00000587988 INTS5Q6P9B9 1019 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-213ENST00000587988 SMIM5Q71RC9 77 aa13.87□□□□□ -0.19
SMARCA4-213ENST00000587988 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
SMARCA4-213ENST00000587988 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-213ENST00000587988 STARD3NLO95772 234 aa13.86□□□□□ -0.19
SMARCA4-213ENST00000587988 PIP4K2AP48426 406 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-213ENST00000587988 AMIGO3Q86WK7 504 aa13.86□□□□□ -0.19
SMARCA4-213ENST00000587988 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
SMARCA4-213ENST00000587988 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
SMARCA4-213ENST00000587988 LAMB4A4D0S4 1761 aa13.86□□□□□ -0.19
SMARCA4-213ENST00000587988 VAMP4O75379 141 aa13.85□□□□□ -0.19
SMARCA4-213ENST00000587988 TWISTNBQ3B726 338 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-213ENST00000587988 RC3H1Q5TC82 1133 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-213ENST00000587988 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
SMARCA4-213ENST00000587988 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 HOXB7P09629 217 aa13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 SLC15A2Q16348 729 aa13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 NBPF14Q5TI25 921 aa13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 NBPF10Q6P3W6 841 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 NBPF15Q8N660 670 aa13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 AK7Q96M32 723 aa13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
SMARCA4-213ENST00000587988 UBR3Q6ZT12 1888 aa13.83□□□□□ -0.2
SMARCA4-213ENST00000587988 GNPATO15228 680 aa13.83□□□□□ -0.2
SMARCA4-213ENST00000587988 HDGFL1Q5TGJ6 251 aa13.83□□□□□ -0.2
SMARCA4-213ENST00000587988 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
SMARCA4-213ENST00000587988 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-213ENST00000587988 RPS6KA4O75676 772 aa13.82□□□□□ -0.2
SMARCA4-213ENST00000587988 ANXA1P04083 346 aa13.82□□□□□ -0.2
SMARCA4-213ENST00000587988 PDIA6Q15084 440 aa13.82□□□□□ -0.2
SMARCA4-213ENST00000587988 PROSER3Q2NL68 480 aa13.82□□□□□ -0.2
SMARCA4-213ENST00000587988 TFCP2L1Q9NZI6 479 aa13.82□□□□□ -0.2
SMARCA4-213ENST00000587988 PHF14O94880 888 aa13.81□□□□□ -0.2
SMARCA4-213ENST00000587988 HMGB2P26583 209 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-213ENST00000587988 CHPF2Q9P2E5 772 aa13.81□□□□□ -0.2
SMARCA4-213ENST00000587988 RTCBQ9Y3I0 505 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-213ENST00000587988 SOS1Q07889 1333 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-213ENST00000587988 MYL6BP14649 208 aa13.8□□□□□ -0.2
SMARCA4-213ENST00000587988 EIF5P55010 431 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-213ENST00000587988 R3HDM1Q15032 1099 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-213ENST00000587988 LRP10Q7Z4F1 713 aa13.8□□□□□ -0.2
SMARCA4-213ENST00000587988 PDGFDQ9GZP0 370 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-213ENST00000587988 PNPLA7Q6ZV29 1317 aa13.8□□□□□ -0.2
SMARCA4-213ENST00000587988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-213ENST00000587988 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-213ENST00000587988 IL6STP40189 918 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-213ENST00000587988 CCDC30Q5VVM6 783 aa13.79□□□□□ -0.2
SMARCA4-213ENST00000587988 COL23A1Q86Y22 540 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-213ENST00000587988 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-213ENST00000587988 DDX21Q9NR30 783 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMARCA4-213ENST00000587988 ZNF330Q9Y3S2 320 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-213ENST00000587988 ERBB4Q15303 1308 aa13.79□□□□□ -0.2
SMARCA4-213ENST00000587988 SSFA2P28290 1259 aa13.78□□□□□ -0.2
SMARCA4-213ENST00000587988 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
SMARCA4-213ENST00000587988 DBF4Q9UBU7 674 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-213ENST00000587988 COL15A1P39059 1388 aa13.78□□□□□ -0.2
SMARCA4-213ENST00000587988 QSER1Q2KHR3 1735 aa13.78□□□□□ -0.2
SMARCA4-213ENST00000587988 C4AP0C0L4 1744 aa13.77□□□□□ -0.21
SMARCA4-213ENST00000587988 PHAXQ9H814 394 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-213ENST00000587988 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
SMARCA4-213ENST00000587988 CT47B1P0C2W7 299 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-213ENST00000587988 ADRA2BP18089 450 aa13.76□□□□□ -0.21
SMARCA4-213ENST00000587988 TTLL7Q6ZT98 887 aa13.76□□□□□ -0.21
SMARCA4-213ENST00000587988 G2E3Q7L622 706 aa13.76□□□□□ -0.21
SMARCA4-213ENST00000587988 SSH1Q8WYL5 1049 aa13.76□□□□□ -0.21
SMARCA4-213ENST00000587988 ARXQ96QS3 562 aa13.76□□□□□ -0.21
SMARCA4-213ENST00000587988 SRP68Q9UHB9 627 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-213ENST00000587988 TBC1D2BQ9UPU7 963 aa13.76□□□□□ -0.21
SMARCA4-213ENST00000587988 MSH5O43196 834 aa13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 RFC4P35249 363 aa13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 FLAD1Q8NFF5 587 aa13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 XAGE3Q8WTP9 111 aa13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 BCL2L13Q9BXK5 485 aa13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 STK31Q9BXU1 1019 aa13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 CHMP4AQ9BY43 222 aa13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 HYPKQ9NX55 129 aa13.75□□□□□ -0.21
SMARCA4-213ENST00000587988 CASZ1Q86V15 1759 aa13.74□□□□□ -0.21
SMARCA4-213ENST00000587988 A0A087WZG4 1122 aa13.74□□□□□ -0.21
SMARCA4-213ENST00000587988 RARSP54136 660 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-213ENST00000587988 MRPL50Q8N5N7 158 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-213ENST00000587988 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
SMARCA4-213ENST00000587988 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-213ENST00000587988 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
SMARCA4-213ENST00000587988 CAMTA2O94983 1202 aa13.73□□□□□ -0.21
SMARCA4-213ENST00000587988 ALDH1L2Q3SY69 923 aa13.73□□□□□ -0.21
SMARCA4-213ENST00000587988 USPL1Q5W0Q7 1092 aa13.73□□□□□ -0.21
SMARCA4-213ENST00000587988 NPM2Q86SE8 214 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-213ENST00000587988 ZNF428Q96B54 188 aa13.73□□□□□ -0.21
SMARCA4-213ENST00000587988 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
SMARCA4-213ENST00000587988 ZPR1O75312 459 aa13.72□□□□□ -0.21
SMARCA4-213ENST00000587988 BCAR3O75815 825 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms