RNA–Protein interactions for RNA: ENST00000587136.1

PTBP1-212, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-212ENST00000587136 NEUROD2Q15784 382 aa27.73■■■□□ 2.03
PTBP1-212ENST00000587136 ARHGEF1Q92888 912 aaKnown RBP27.73■■■□□ 2.03
PTBP1-212ENST00000587136 MRS2Q9HD23 443 aa27.73■■■□□ 2.03
PTBP1-212ENST00000587136 RFC4P35249 363 aa27.71■■■□□ 2.03
PTBP1-212ENST00000587136 MIS18AQ9NYP9 233 aa27.7■■■□□ 2.02
PTBP1-212ENST00000587136 LAMB4A4D0S4 1761 aa27.69■■■□□ 2.02
PTBP1-212ENST00000587136 FHDC1Q9C0D6 1143 aaPredicted RBP27.68■■■□□ 2.02
PTBP1-212ENST00000587136 ZBTB1Q9Y2K1 713 aa27.68■■■□□ 2.02
PTBP1-212ENST00000587136 SOS1Q07889 1333 aaPredicted RBP27.67■■■□□ 2.02
PTBP1-212ENST00000587136 SNRPA1P09661 255 aaKnown RBP27.67■■■□□ 2.02
PTBP1-212ENST00000587136 CANXP27824 592 aaKnown RBP27.65■■■□□ 2.02
PTBP1-212ENST00000587136 TRIM35Q9UPQ4 493 aa27.65■■■□□ 2.02
PTBP1-212ENST00000587136 COL15A1P39059 1388 aa27.64■■■□□ 2.02
PTBP1-212ENST00000587136 APAF1O14727 1248 aa27.64■■■□□ 2.02
PTBP1-212ENST00000587136 NLGN1Q8N2Q7 840 aa27.64■■■□□ 2.02
PTBP1-212ENST00000587136 SYT17Q9BSW7 474 aa27.64■■■□□ 2.02
PTBP1-212ENST00000587136 GYS1P13807 737 aa27.63■■■□□ 2.01
PTBP1-212ENST00000587136 KLHL34Q8N239 644 aa27.63■■■□□ 2.01
PTBP1-212ENST00000587136 USP16Q9Y5T5 823 aa27.63■■■□□ 2.01
PTBP1-212ENST00000587136 USP42Q9H9J4 1324 aaKnown RBP27.63■■■□□ 2.01
PTBP1-212ENST00000587136 BABAM1Q9NWV8 329 aa27.62■■■□□ 2.01
PTBP1-212ENST00000587136 TSPYL4Q9UJ04 414 aa27.62■■■□□ 2.01
PTBP1-212ENST00000587136 PRAMEF22A3QJZ6 481 aa27.61■■■□□ 2.01
PTBP1-212ENST00000587136 EIF4A1P60842 406 aaKnown RBP27.61■■■□□ 2.01
PTBP1-212ENST00000587136 SRP68Q9UHB9 627 aaKnown RBP27.61■■■□□ 2.01
PTBP1-212ENST00000587136 ZPR1O75312 459 aa27.6■■■□□ 2.01
PTBP1-212ENST00000587136 A1BGP04217 495 aa27.6■■■□□ 2.01
PTBP1-212ENST00000587136 IL6STP40189 918 aaPredicted RBP27.59■■■□□ 2.01
PTBP1-212ENST00000587136 EIF5P55010 431 aaKnown RBP27.59■■■□□ 2.01
PTBP1-212ENST00000587136 A0A087WZG4 1122 aa27.58■■■□□ 2.01
PTBP1-212ENST00000587136 MMP10P09238 476 aa27.58■■■□□ 2.01
PTBP1-212ENST00000587136 NPM2Q86SE8 214 aaKnown RBP27.58■■■□□ 2.01
PTBP1-212ENST00000587136 NARFQ9UHQ1 456 aa27.58■■■□□ 2.01
PTBP1-212ENST00000587136 USPL1Q5W0Q7 1092 aa27.57■■■□□ 2
PTBP1-212ENST00000587136 ZNF330Q9Y3S2 320 aaPredicted RBP27.57■■■□□ 2
PTBP1-212ENST00000587136 SCN7AQ01118 1682 aa27.56■■■□□ 2
PTBP1-212ENST00000587136 GIGYF1O75420 1035 aaPredicted RBP27.56■■■□□ 2
PTBP1-212ENST00000587136 LAS1LQ9Y4W2 734 aaKnown RBP27.56■■■□□ 2
PTBP1-212ENST00000587136 KIF13BQ9NQT8 1826 aa27.55■■■□□ 2
PTBP1-212ENST00000587136 DCAF8L1A6NGE4 600 aa27.54■■■□□ 2
PTBP1-212ENST00000587136 FKBP8Q14318 412 aa27.54■■■□□ 2
PTBP1-212ENST00000587136 BCORQ6W2J9 1755 aa27.54■■■□□ 2
PTBP1-212ENST00000587136 CHL1O00533 1208 aa27.53■■■□□ 2
PTBP1-212ENST00000587136 CD2APQ9Y5K6 639 aa27.53■■■□□ 2
PTBP1-212ENST00000587136 PIP4K2AP48426 406 aaPredicted RBP27.52■■■□□ 2
PTBP1-212ENST00000587136 CALD1Q05682 793 aaKnown RBP27.52■■■□□ 2
PTBP1-212ENST00000587136 PARP3Q9Y6F1 533 aa27.52■■■□□ 2
PTBP1-212ENST00000587136 AFDNP55196 1824 aaKnown RBP27.51■■□□□ 1.99
PTBP1-212ENST00000587136 FAM9BQ8IZU0 186 aa27.51■■□□□ 1.99
PTBP1-212ENST00000587136 CFAP44Q96MT7 982 aa27.5■■□□□ 1.99
PTBP1-212ENST00000587136 TBC1D2BQ9UPU7 963 aa27.5■■□□□ 1.99
PTBP1-212ENST00000587136 NBPF26B4DH59 902 aa27.49■■□□□ 1.99
PTBP1-212ENST00000587136 NBPF10Q6P3W6 841 aaKnown RBP27.49■■□□□ 1.99
PTBP1-212ENST00000587136 NBPF15Q8N660 670 aa27.49■■□□□ 1.99
PTBP1-212ENST00000587136 NLGN2Q8NFZ4 835 aa27.49■■□□□ 1.99
PTBP1-212ENST00000587136 DZIP3Q86Y13 1208 aaKnown RBP27.48■■□□□ 1.99
PTBP1-212ENST00000587136 BCL2L12Q9HB09 334 aa27.48■■□□□ 1.99
PTBP1-212ENST00000587136 TM4SF1P30408 202 aa27.47■■□□□ 1.99
PTBP1-212ENST00000587136 CCDC27Q2M243 656 aa27.47■■□□□ 1.99
PTBP1-212ENST00000587136 SENP3-EIF4A1A0A087X0R7 540 aa27.46■■□□□ 1.99
PTBP1-212ENST00000587136 GNAI1P63096 354 aa27.46■■□□□ 1.99
PTBP1-212ENST00000587136 IFT57Q9NWB7 429 aa27.46■■□□□ 1.99
PTBP1-212ENST00000587136 NRXN2Q9P2S2 1712 aa27.45■■□□□ 1.99
PTBP1-212ENST00000587136 ZNF853P0CG23 659 aa27.45■■□□□ 1.98
PTBP1-212ENST00000587136 DDR1Q08345 913 aa27.45■■□□□ 1.98
PTBP1-212ENST00000587136 NCBP3Q53F19 620 aaKnown RBP27.45■■□□□ 1.98
PTBP1-212ENST00000587136 N4BP2Q86UW6 1770 aaPredicted RBP27.45■■□□□ 1.98
PTBP1-212ENST00000587136 ERBB4Q15303 1308 aa27.44■■□□□ 1.98
PTBP1-212ENST00000587136 C10orf71Q711Q0 1435 aa27.44■■□□□ 1.98
PTBP1-212ENST00000587136 POLRMTO00411 1230 aaKnown RBP27.44■■□□□ 1.98
PTBP1-212ENST00000587136 CAMTA2O94983 1202 aa27.44■■□□□ 1.98
PTBP1-212ENST00000587136 NFIXQ14938 502 aa27.44■■□□□ 1.98
PTBP1-212ENST00000587136 MBIPQ9NS73 344 aa27.44■■□□□ 1.98
PTBP1-212ENST00000587136 NUP98P52948 1817 aa27.44■■□□□ 1.98
PTBP1-212ENST00000587136 EIF2S2P20042 333 aaKnown RBP27.43■■□□□ 1.98
PTBP1-212ENST00000587136 KIAA1551Q9HCM1 1747 aa27.43■■□□□ 1.98
PTBP1-212ENST00000587136 MYL6BP14649 208 aa27.41■■□□□ 1.98
PTBP1-212ENST00000587136 KRT24Q2M2I5 525 aa27.41■■□□□ 1.98
PTBP1-212ENST00000587136 WWC1Q8IX03 1113 aa27.41■■□□□ 1.98
PTBP1-212ENST00000587136 TBC1D9BQ66K14 1250 aa27.4■■□□□ 1.98
PTBP1-212ENST00000587136 BICDL1Q6ZP65 573 aa27.4■■□□□ 1.98
PTBP1-212ENST00000587136 NGEFQ8N5V2 710 aa27.4■■□□□ 1.98
PTBP1-212ENST00000587136 CHD4Q14839 1912 aa27.39■■□□□ 1.98
PTBP1-212ENST00000587136 GPR162Q16538 588 aa27.39■■□□□ 1.98
PTBP1-212ENST00000587136 PELP1Q8IZL8 1130 aaKnown RBP27.39■■□□□ 1.98
PTBP1-212ENST00000587136 ZNF652Q9Y2D9 606 aa27.39■■□□□ 1.98
PTBP1-212ENST00000587136 CCER2I3L3R5 266 aa27.38■■□□□ 1.97
PTBP1-212ENST00000587136 SERPINB2P05120 415 aa27.38■■□□□ 1.97
PTBP1-212ENST00000587136 HOXB7P09629 217 aa27.38■■□□□ 1.97
PTBP1-212ENST00000587136 CLEC4GQ6UXB4 293 aa27.38■■□□□ 1.97
PTBP1-212ENST00000587136 BRCA1P38398 1863 aaKnown RBP27.37■■□□□ 1.97
PTBP1-212ENST00000587136 TGFB2P61812 414 aa27.37■■□□□ 1.97
PTBP1-212ENST00000587136 SALL2Q9Y467 1007 aaPredicted RBP27.37■■□□□ 1.97
PTBP1-212ENST00000587136 RGL2O15211 777 aa27.36■■□□□ 1.97
PTBP1-212ENST00000587136 DIEXFQ68CQ4 756 aaKnown RBP27.36■■□□□ 1.97
PTBP1-212ENST00000587136 NECTIN2Q92692 538 aa27.36■■□□□ 1.97
PTBP1-212ENST00000587136 PXDNLA1KZ92 1463 aa27.36■■□□□ 1.97
PTBP1-212ENST00000587136 CARMIL3Q8ND23 1372 aa27.35■■□□□ 1.97
PTBP1-212ENST00000587136 PDIA6Q15084 440 aa27.35■■□□□ 1.97
PTBP1-212ENST00000587136 DUSP27Q5VZP5 1158 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms