RNA–Protein interactions for RNA: ENST00000587072.1

GCDH-205, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 453 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-205ENST00000587072 RTCBQ9Y3I0 505 aaKnown RBP21.29■■□□□ 1
GCDH-205ENST00000587072 PNPLA7Q6ZV29 1317 aa21.29■■□□□ 1
GCDH-205ENST00000587072 MBIPQ9NS73 344 aa21.28■■□□□ 1
GCDH-205ENST00000587072 CASZ1Q86V15 1759 aa21.28■■□□□ 1
GCDH-205ENST00000587072 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
GCDH-205ENST00000587072 RPS6KA4O75676 772 aa21.26■□□□□ 0.99
GCDH-205ENST00000587072 ADRA2BP18089 450 aa21.26■□□□□ 0.99
GCDH-205ENST00000587072 INTS5Q6P9B9 1019 aaKnown RBP21.26■□□□□ 0.99
GCDH-205ENST00000587072 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.25■□□□□ 0.99
GCDH-205ENST00000587072 PHF14O94880 888 aa21.25■□□□□ 0.99
GCDH-205ENST00000587072 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
GCDH-205ENST00000587072 ZNF521Q96K83 1311 aa21.25■□□□□ 0.99
GCDH-205ENST00000587072 PRAMEF22A3QJZ6 481 aa21.24■□□□□ 0.99
GCDH-205ENST00000587072 MSH5O43196 834 aa21.24■□□□□ 0.99
GCDH-205ENST00000587072 ZBTB1Q9Y2K1 713 aa21.24■□□□□ 0.99
GCDH-205ENST00000587072 HOXB7P09629 217 aa21.23■□□□□ 0.99
GCDH-205ENST00000587072 TRAPPC3LQ5T215 181 aa21.23■□□□□ 0.99
GCDH-205ENST00000587072 COL23A1Q86Y22 540 aaPredicted RBP21.23■□□□□ 0.99
GCDH-205ENST00000587072 SLC16A10Q8TF71 515 aa21.23■□□□□ 0.99
GCDH-205ENST00000587072 MYH16Q9H6N6 1097 aa21.23■□□□□ 0.99
GCDH-205ENST00000587072 AMIGO3Q86WK7 504 aa21.22■□□□□ 0.99
GCDH-205ENST00000587072 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
GCDH-205ENST00000587072 CANXP27824 592 aaKnown RBP21.21■□□□□ 0.99
GCDH-205ENST00000587072 NPM2Q86SE8 214 aaKnown RBP21.21■□□□□ 0.99
GCDH-205ENST00000587072 TSR2Q969E8 191 aaKnown RBP21.21■□□□□ 0.99
GCDH-205ENST00000587072 PDGFDQ9GZP0 370 aaPredicted RBP21.21■□□□□ 0.99
GCDH-205ENST00000587072 COL15A1P39059 1388 aa21.21■□□□□ 0.99
GCDH-205ENST00000587072 A1BGP04217 495 aa21.2■□□□□ 0.98
GCDH-205ENST00000587072 IL6STP40189 918 aaPredicted RBP21.2■□□□□ 0.98
GCDH-205ENST00000587072 GOLGA2Q08379 1002 aa21.2■□□□□ 0.98
GCDH-205ENST00000587072 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
GCDH-205ENST00000587072 ERBB4Q15303 1308 aa21.2■□□□□ 0.98
GCDH-205ENST00000587072 FANCIQ9NVI1 1328 aa21.2■□□□□ 0.98
GCDH-205ENST00000587072 C4AP0C0L4 1744 aa21.2■□□□□ 0.98
GCDH-205ENST00000587072 A0A087WZG4 1122 aa21.19■□□□□ 0.98
GCDH-205ENST00000587072 RFC4P35249 363 aa21.19■□□□□ 0.98
GCDH-205ENST00000587072 HNRNPUQ00839 825 aaKnown RBP eCLIP21.19■□□□□ 0.98
GCDH-205ENST00000587072 KRT24Q2M2I5 525 aa21.19■□□□□ 0.98
GCDH-205ENST00000587072 EIF5P55010 431 aaKnown RBP21.18■□□□□ 0.98
GCDH-205ENST00000587072 DUSP27Q5VZP5 1158 aa21.18■□□□□ 0.98
GCDH-205ENST00000587072 SMIM5Q71RC9 77 aa21.18■□□□□ 0.98
GCDH-205ENST00000587072 ARHGEF1Q92888 912 aaKnown RBP21.18■□□□□ 0.98
GCDH-205ENST00000587072 CHMP4AQ9BY43 222 aa21.18■□□□□ 0.98
GCDH-205ENST00000587072 E9PSI1 815 aa21.17■□□□□ 0.98
GCDH-205ENST00000587072 ZBTB7AO95365 584 aa21.17■□□□□ 0.98
GCDH-205ENST00000587072 EIF2S2P20042 333 aaKnown RBP21.17■□□□□ 0.98
GCDH-205ENST00000587072 ZNF330Q9Y3S2 320 aaPredicted RBP21.17■□□□□ 0.98
GCDH-205ENST00000587072 SRCAPQ6ZRS2 3230 aa21.16■□□□□ 0.98
GCDH-205ENST00000587072 HDGFL1Q5TGJ6 251 aa21.16■□□□□ 0.98
GCDH-205ENST00000587072 SPON1Q9HCB6 807 aa21.16■□□□□ 0.98
GCDH-205ENST00000587072 USP42Q9H9J4 1324 aaKnown RBP21.15■□□□□ 0.98
GCDH-205ENST00000587072 NBPF26B4DH59 902 aa21.15■□□□□ 0.98
GCDH-205ENST00000587072 ZPR1O75312 459 aa21.15■□□□□ 0.98
GCDH-205ENST00000587072 NBPF10Q6P3W6 841 aaKnown RBP21.15■□□□□ 0.98
GCDH-205ENST00000587072 NBPF15Q8N660 670 aa21.15■□□□□ 0.98
GCDH-205ENST00000587072 SPINK5Q9NQ38 1064 aaPredicted RBP21.15■□□□□ 0.98
GCDH-205ENST00000587072 PIP4K2AP48426 406 aaPredicted RBP21.14■□□□□ 0.97
GCDH-205ENST00000587072 C8orf58Q8NAV2 365 aa21.14■□□□□ 0.97
GCDH-205ENST00000587072 LRP5O75197 1615 aa21.14■□□□□ 0.97
GCDH-205ENST00000587072 ELL2O00472 640 aaPredicted RBP21.13■□□□□ 0.97
GCDH-205ENST00000587072 NARFQ9UHQ1 456 aa21.13■□□□□ 0.97
GCDH-205ENST00000587072 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
GCDH-205ENST00000587072 TWISTNBQ3B726 338 aaPredicted RBP21.12■□□□□ 0.97
GCDH-205ENST00000587072 NECTIN2Q92692 538 aa21.12■□□□□ 0.97
GCDH-205ENST00000587072 ATF5Q9Y2D1 282 aaPredicted RBP21.12■□□□□ 0.97
GCDH-205ENST00000587072 GYS1P13807 737 aa21.11■□□□□ 0.97
GCDH-205ENST00000587072 MYL6BP14649 208 aa21.11■□□□□ 0.97
GCDH-205ENST00000587072 POLD1P28340 1107 aa21.11■□□□□ 0.97
GCDH-205ENST00000587072 SLFN5Q08AF3 891 aa21.11■□□□□ 0.97
GCDH-205ENST00000587072 DZIP3Q86Y13 1208 aaKnown RBP21.11■□□□□ 0.97
GCDH-205ENST00000587072 NLGN1Q8N2Q7 840 aa21.11■□□□□ 0.97
GCDH-205ENST00000587072 SRP68Q9UHB9 627 aaKnown RBP21.11■□□□□ 0.97
GCDH-205ENST00000587072 SCN7AQ01118 1682 aa21.11■□□□□ 0.97
GCDH-205ENST00000587072 ZBED9Q6R2W3 1325 aa21.1■□□□□ 0.97
GCDH-205ENST00000587072 EXOSC9Q06265 439 aaKnown RBP21.1■□□□□ 0.97
GCDH-205ENST00000587072 CCDC30Q5VVM6 783 aa21.1■□□□□ 0.97
GCDH-205ENST00000587072 USPL1Q5W0Q7 1092 aa21.1■□□□□ 0.97
GCDH-205ENST00000587072 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
GCDH-205ENST00000587072 TSPYL6Q8N831 410 aa21.1■□□□□ 0.97
GCDH-205ENST00000587072 ARXQ96QS3 562 aa21.1■□□□□ 0.97
GCDH-205ENST00000587072 DDX21Q9NR30 783 aaKnown RBP eCLIP21.1■□□□□ 0.97
GCDH-205ENST00000587072 CHPF2Q9P2E5 772 aa21.1■□□□□ 0.97
GCDH-205ENST00000587072 DBF4Q9UBU7 674 aaPredicted RBP21.1■□□□□ 0.97
GCDH-205ENST00000587072 PDIA6Q15084 440 aa21.09■□□□□ 0.97
GCDH-205ENST00000587072 TBC1D2BQ9UPU7 963 aa21.09■□□□□ 0.97
GCDH-205ENST00000587072 BCORQ6W2J9 1755 aa21.09■□□□□ 0.97
GCDH-205ENST00000587072 KIF6Q6ZMV9 814 aa21.08■□□□□ 0.97
GCDH-205ENST00000587072 CDCA7LQ96GN5 454 aa21.08■□□□□ 0.97
GCDH-205ENST00000587072 RGL2O15211 777 aa21.07■□□□□ 0.96
GCDH-205ENST00000587072 PTGER2P43116 358 aa21.07■□□□□ 0.96
GCDH-205ENST00000587072 PROSER3Q2NL68 480 aa21.07■□□□□ 0.96
GCDH-205ENST00000587072 HYPKQ9NX55 129 aa21.07■□□□□ 0.96
GCDH-205ENST00000587072 ZNF652Q9Y2D9 606 aa21.07■□□□□ 0.96
GCDH-205ENST00000587072 CAMTA2O94983 1202 aa21.06■□□□□ 0.96
GCDH-205ENST00000587072 LRP10Q7Z4F1 713 aa21.06■□□□□ 0.96
GCDH-205ENST00000587072 SGIP1Q9BQI5 828 aa21.06■□□□□ 0.96
GCDH-205ENST00000587072 STK31Q9BXU1 1019 aa21.06■□□□□ 0.96
GCDH-205ENST00000587072 CACNA1FO60840 1977 aa21.05■□□□□ 0.96
GCDH-205ENST00000587072 ANXA1P04083 346 aa21.05■□□□□ 0.96
GCDH-205ENST00000587072 FKBP8Q14318 412 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms