RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 CFAP44Q96MT7 982 aa27.98■■■□□ 2.07
RETREG3-202ENST00000585726 CICQ96RK0 1608 aaPredicted RBP27.97■■■□□ 2.07
RETREG3-202ENST00000585726 CANXP27824 592 aaKnown RBP27.97■■■□□ 2.07
RETREG3-202ENST00000585726 SSFA2P28290 1259 aa27.97■■■□□ 2.07
RETREG3-202ENST00000585726 ATF5Q9Y2D1 282 aaPredicted RBP27.97■■■□□ 2.07
RETREG3-202ENST00000585726 ZBTB1Q9Y2K1 713 aa27.97■■■□□ 2.07
RETREG3-202ENST00000585726 CASZ1Q86V15 1759 aa27.96■■■□□ 2.07
RETREG3-202ENST00000585726 TRAPPC3LQ5T215 181 aa27.96■■■□□ 2.07
RETREG3-202ENST00000585726 GIGYF1O75420 1035 aaPredicted RBP27.95■■■□□ 2.06
RETREG3-202ENST00000585726 GNAI1P63096 354 aa27.95■■■□□ 2.06
RETREG3-202ENST00000585726 MBIPQ9NS73 344 aa27.95■■■□□ 2.06
RETREG3-202ENST00000585726 IFT57Q9NWB7 429 aa27.95■■■□□ 2.06
RETREG3-202ENST00000585726 UBR3Q6ZT12 1888 aa27.94■■■□□ 2.06
RETREG3-202ENST00000585726 A1BGP04217 495 aa27.94■■■□□ 2.06
RETREG3-202ENST00000585726 NCBP3Q53F19 620 aaKnown RBP27.94■■■□□ 2.06
RETREG3-202ENST00000585726 QSER1Q2KHR3 1735 aa27.94■■■□□ 2.06
RETREG3-202ENST00000585726 ZNF853P0CG23 659 aa27.93■■■□□ 2.06
RETREG3-202ENST00000585726 ARHGEF1Q92888 912 aaKnown RBP27.93■■■□□ 2.06
RETREG3-202ENST00000585726 ZNF330Q9Y3S2 320 aaPredicted RBP27.93■■■□□ 2.06
RETREG3-202ENST00000585726 MYH14Q7Z406 1995 aaKnown RBP27.93■■■□□ 2.06
RETREG3-202ENST00000585726 PIP4K2AP48426 406 aaPredicted RBP27.92■■■□□ 2.06
RETREG3-202ENST00000585726 KRT24Q2M2I5 525 aa27.92■■■□□ 2.06
RETREG3-202ENST00000585726 MTFR1LQ9H019 292 aa27.92■■■□□ 2.06
RETREG3-202ENST00000585726 SPON1Q9HCB6 807 aa27.92■■■□□ 2.06
RETREG3-202ENST00000585726 MSL1Q68DK7 614 aa27.91■■■□□ 2.06
RETREG3-202ENST00000585726 SLC16A10Q8TF71 515 aa27.91■■■□□ 2.06
RETREG3-202ENST00000585726 RFC4P35249 363 aa27.9■■■□□ 2.06
RETREG3-202ENST00000585726 SOS1Q07889 1333 aaPredicted RBP27.9■■■□□ 2.06
RETREG3-202ENST00000585726 ADRA2BP18089 450 aa27.89■■■□□ 2.06
RETREG3-202ENST00000585726 NGEFQ8N5V2 710 aa27.89■■■□□ 2.06
RETREG3-202ENST00000585726 EIF2S2P20042 333 aaKnown RBP27.88■■■□□ 2.05
RETREG3-202ENST00000585726 WDR63Q8IWG1 891 aa27.88■■■□□ 2.05
RETREG3-202ENST00000585726 TSR2Q969E8 191 aaKnown RBP27.88■■■□□ 2.05
RETREG3-202ENST00000585726 ARXQ96QS3 562 aa27.87■■■□□ 2.05
RETREG3-202ENST00000585726 NECTIN2Q92692 538 aa27.86■■■□□ 2.05
RETREG3-202ENST00000585726 IL16Q14005 1332 aa27.86■■■□□ 2.05
RETREG3-202ENST00000585726 COL15A1P39059 1388 aa27.86■■■□□ 2.05
RETREG3-202ENST00000585726 NPM2Q86SE8 214 aaKnown RBP27.85■■■□□ 2.05
RETREG3-202ENST00000585726 SRP68Q9UHB9 627 aaKnown RBP27.85■■■□□ 2.05
RETREG3-202ENST00000585726 ELL2O00472 640 aaPredicted RBP27.84■■■□□ 2.05
RETREG3-202ENST00000585726 IL6STP40189 918 aaPredicted RBP27.84■■■□□ 2.05
RETREG3-202ENST00000585726 EIF5P55010 431 aaKnown RBP27.84■■■□□ 2.05
RETREG3-202ENST00000585726 NBPF26B4DH59 902 aa27.83■■■□□ 2.05
RETREG3-202ENST00000585726 DUSP27Q5VZP5 1158 aa27.83■■■□□ 2.05
RETREG3-202ENST00000585726 NBPF10Q6P3W6 841 aaKnown RBP27.83■■■□□ 2.05
RETREG3-202ENST00000585726 NBPF15Q8N660 670 aa27.83■■■□□ 2.05
RETREG3-202ENST00000585726 ZPR1O75312 459 aa27.82■■■□□ 2.04
RETREG3-202ENST00000585726 PTGER2P43116 358 aa27.82■■■□□ 2.04
RETREG3-202ENST00000585726 LAMB4A4D0S4 1761 aa27.81■■■□□ 2.04
RETREG3-202ENST00000585726 MYL6BP14649 208 aa27.81■■■□□ 2.04
RETREG3-202ENST00000585726 POLD1P28340 1107 aa27.81■■■□□ 2.04
RETREG3-202ENST00000585726 SPINK5Q9NQ38 1064 aaPredicted RBP27.81■■■□□ 2.04
RETREG3-202ENST00000585726 PPP1R1BQ9UD71 204 aaPredicted RBP27.81■■■□□ 2.04
RETREG3-202ENST00000585726 TBC1D2BQ9UPU7 963 aa27.81■■■□□ 2.04
RETREG3-202ENST00000585726 A0A087WZG4 1122 aa27.8■■■□□ 2.04
RETREG3-202ENST00000585726 USPL1Q5W0Q7 1092 aa27.8■■■□□ 2.04
RETREG3-202ENST00000585726 C8orf58Q8NAV2 365 aa27.8■■■□□ 2.04
RETREG3-202ENST00000585726 USP42Q9H9J4 1324 aaKnown RBP27.8■■■□□ 2.04
RETREG3-202ENST00000585726 ZNF521Q96K83 1311 aa27.79■■■□□ 2.04
RETREG3-202ENST00000585726 FANCIQ9NVI1 1328 aa27.79■■■□□ 2.04
RETREG3-202ENST00000585726 GYS1P13807 737 aa27.79■■■□□ 2.04
RETREG3-202ENST00000585726 C4AP0C0L4 1744 aa27.78■■■□□ 2.04
RETREG3-202ENST00000585726 HDGFL1Q5TGJ6 251 aa27.78■■■□□ 2.04
RETREG3-202ENST00000585726 NARFQ9UHQ1 456 aa27.78■■■□□ 2.04
RETREG3-202ENST00000585726 LRP5O75197 1615 aa27.78■■■□□ 2.04
RETREG3-202ENST00000585726 SGIP1Q9BQI5 828 aa27.77■■■□□ 2.04
RETREG3-202ENST00000585726 ANXA1P04083 346 aa27.76■■■□□ 2.03
RETREG3-202ENST00000585726 GOLGA2Q08379 1002 aa27.76■■■□□ 2.03
RETREG3-202ENST00000585726 DZIP3Q86Y13 1208 aaKnown RBP27.76■■■□□ 2.03
RETREG3-202ENST00000585726 NLGN1Q8N2Q7 840 aa27.76■■■□□ 2.03
RETREG3-202ENST00000585726 TSPYL6Q8N831 410 aa27.76■■■□□ 2.03
RETREG3-202ENST00000585726 MYH16Q9H6N6 1097 aa27.76■■■□□ 2.03
RETREG3-202ENST00000585726 HOXB7P09629 217 aa27.75■■■□□ 2.03
RETREG3-202ENST00000585726 FKBP8Q14318 412 aa27.75■■■□□ 2.03
RETREG3-202ENST00000585726 HNRNPUQ00839 825 aaKnown RBP eCLIP27.74■■■□□ 2.03
RETREG3-202ENST00000585726 PROSER3Q2NL68 480 aa27.74■■■□□ 2.03
RETREG3-202ENST00000585726 ERBB4Q15303 1308 aa27.73■■■□□ 2.03
RETREG3-202ENST00000585726 MMP10P09238 476 aa27.73■■■□□ 2.03
RETREG3-202ENST00000585726 EXOSC9Q06265 439 aaKnown RBP27.72■■■□□ 2.03
RETREG3-202ENST00000585726 PDIA6Q15084 440 aa27.72■■■□□ 2.03
RETREG3-202ENST00000585726 KLHL34Q8N239 644 aa27.72■■■□□ 2.03
RETREG3-202ENST00000585726 BCL2L12Q9HB09 334 aa27.72■■■□□ 2.03
RETREG3-202ENST00000585726 CHPF2Q9P2E5 772 aa27.72■■■□□ 2.03
RETREG3-202ENST00000585726 TWISTNBQ3B726 338 aaPredicted RBP27.71■■■□□ 2.03
RETREG3-202ENST00000585726 CAMTA2O94983 1202 aa27.7■■■□□ 2.02
RETREG3-202ENST00000585726 BICDL1Q6ZP65 573 aa27.7■■■□□ 2.02
RETREG3-202ENST00000585726 CDCA7LQ96GN5 454 aa27.7■■■□□ 2.02
RETREG3-202ENST00000585726 TTLL7Q6ZT98 887 aa27.69■■■□□ 2.02
RETREG3-202ENST00000585726 DDX21Q9NR30 783 aaKnown RBP eCLIP27.69■■■□□ 2.02
RETREG3-202ENST00000585726 E9PSI1 815 aa27.68■■■□□ 2.02
RETREG3-202ENST00000585726 TCERG1O14776 1098 aaKnown RBP27.68■■■□□ 2.02
RETREG3-202ENST00000585726 AIMP1Q12904 312 aaKnown RBP27.68■■■□□ 2.02
RETREG3-202ENST00000585726 KIF6Q6ZMV9 814 aa27.68■■■□□ 2.02
RETREG3-202ENST00000585726 DBF4Q9UBU7 674 aaPredicted RBP27.68■■■□□ 2.02
RETREG3-202ENST00000585726 COL24A1Q17RW2 1714 aa27.67■■■□□ 2.02
RETREG3-202ENST00000585726 PARP3Q9Y6F1 533 aa27.67■■■□□ 2.02
RETREG3-202ENST00000585726 SLFN5Q08AF3 891 aa27.66■■■□□ 2.02
RETREG3-202ENST00000585726 NFIXQ14938 502 aa27.66■■■□□ 2.02
RETREG3-202ENST00000585726 CCDC30Q5VVM6 783 aa27.66■■■□□ 2.02
RETREG3-202ENST00000585726 LRP10Q7Z4F1 713 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms