RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 SLFN5Q08AF3 891 aa21.69■■□□□ 1.06
GCDH-203ENST00000585420 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
GCDH-203ENST00000585420 PRAMEF22A3QJZ6 481 aa21.69■■□□□ 1.06
GCDH-203ENST00000585420 SSFA2P28290 1259 aa21.69■■□□□ 1.06
GCDH-203ENST00000585420 INTS5Q6P9B9 1019 aaKnown RBP21.69■■□□□ 1.06
GCDH-203ENST00000585420 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
GCDH-203ENST00000585420 MYH14Q7Z406 1995 aaKnown RBP21.68■■□□□ 1.06
GCDH-203ENST00000585420 RTCBQ9Y3I0 505 aaKnown RBP21.68■■□□□ 1.06
GCDH-203ENST00000585420 IL16Q14005 1332 aa21.68■■□□□ 1.06
GCDH-203ENST00000585420 FLAD1Q8NFF5 587 aa21.67■■□□□ 1.06
GCDH-203ENST00000585420 MTFR1LQ9H019 292 aa21.67■■□□□ 1.06
GCDH-203ENST00000585420 SPON1Q9HCB6 807 aa21.67■■□□□ 1.06
GCDH-203ENST00000585420 TSPYL4Q9UJ04 414 aa21.67■■□□□ 1.06
GCDH-203ENST00000585420 LAS1LQ9Y4W2 734 aaKnown RBP21.67■■□□□ 1.06
GCDH-203ENST00000585420 RPS6KA4O75676 772 aa21.66■■□□□ 1.06
GCDH-203ENST00000585420 MYH16Q9H6N6 1097 aa21.66■■□□□ 1.06
GCDH-203ENST00000585420 EIF4A1P60842 406 aaKnown RBP21.66■■□□□ 1.06
GCDH-203ENST00000585420 SLC16A10Q8TF71 515 aa21.66■■□□□ 1.06
GCDH-203ENST00000585420 CCDC87Q9NVE4 849 aa21.66■■□□□ 1.06
GCDH-203ENST00000585420 USP16Q9Y5T5 823 aa21.66■■□□□ 1.06
GCDH-203ENST00000585420 KDM3BQ7LBC6 1761 aa21.66■■□□□ 1.06
GCDH-203ENST00000585420 STARD3NLO95772 234 aa21.65■■□□□ 1.06
GCDH-203ENST00000585420 SNRPA1P09661 255 aaKnown RBP21.65■■□□□ 1.06
GCDH-203ENST00000585420 DUSP27Q5VZP5 1158 aa21.65■■□□□ 1.06
GCDH-203ENST00000585420 TEX13AQ9BXU3 409 aaPredicted RBP21.65■■□□□ 1.06
GCDH-203ENST00000585420 ZBTB1Q9Y2K1 713 aa21.65■■□□□ 1.06
GCDH-203ENST00000585420 TRAPPC3LQ5T215 181 aa21.64■■□□□ 1.06
GCDH-203ENST00000585420 ARHGEF1Q92888 912 aaKnown RBP21.64■■□□□ 1.06
GCDH-203ENST00000585420 IFT57Q9NWB7 429 aa21.64■■□□□ 1.06
GCDH-203ENST00000585420 CHL1O00533 1208 aa21.63■■□□□ 1.05
GCDH-203ENST00000585420 PTGER2P43116 358 aa21.63■■□□□ 1.05
GCDH-203ENST00000585420 BABAM1Q9NWV8 329 aa21.63■■□□□ 1.05
GCDH-203ENST00000585420 GNAI1P63096 354 aa21.63■■□□□ 1.05
GCDH-203ENST00000585420 TRMT2AQ8IZ69 625 aaKnown RBP21.63■■□□□ 1.05
GCDH-203ENST00000585420 TSR2Q969E8 191 aaKnown RBP21.63■■□□□ 1.05
GCDH-203ENST00000585420 LRP5O75197 1615 aa21.63■■□□□ 1.05
GCDH-203ENST00000585420 A1BGP04217 495 aa21.62■■□□□ 1.05
GCDH-203ENST00000585420 CANXP27824 592 aaKnown RBP21.62■■□□□ 1.05
GCDH-203ENST00000585420 CFAP44Q96MT7 982 aa21.62■■□□□ 1.05
GCDH-203ENST00000585420 FANCIQ9NVI1 1328 aa21.61■■□□□ 1.05
GCDH-203ENST00000585420 GIGYF1O75420 1035 aaPredicted RBP21.61■■□□□ 1.05
GCDH-203ENST00000585420 ADRA2BP18089 450 aa21.61■■□□□ 1.05
GCDH-203ENST00000585420 MSL1Q68DK7 614 aa21.61■■□□□ 1.05
GCDH-203ENST00000585420 SGIP1Q9BQI5 828 aa21.61■■□□□ 1.05
GCDH-203ENST00000585420 SOS1Q07889 1333 aaPredicted RBP21.6■■□□□ 1.05
GCDH-203ENST00000585420 ZNF853P0CG23 659 aa21.6■■□□□ 1.05
GCDH-203ENST00000585420 RFC4P35249 363 aa21.59■■□□□ 1.05
GCDH-203ENST00000585420 PIP4K2AP48426 406 aaPredicted RBP21.59■■□□□ 1.05
GCDH-203ENST00000585420 MBIPQ9NS73 344 aa21.58■■□□□ 1.05
GCDH-203ENST00000585420 KRT24Q2M2I5 525 aa21.58■■□□□ 1.04
GCDH-203ENST00000585420 EIF5P55010 431 aaKnown RBP21.57■■□□□ 1.04
GCDH-203ENST00000585420 GOLGB1Q14789 3259 aaKnown RBP21.57■■□□□ 1.04
GCDH-203ENST00000585420 COL15A1P39059 1388 aa21.56■■□□□ 1.04
GCDH-203ENST00000585420 UTRNP46939 3433 aa21.56■■□□□ 1.04
GCDH-203ENST00000585420 SRP68Q9UHB9 627 aaKnown RBP21.56■■□□□ 1.04
GCDH-203ENST00000585420 ZNF330Q9Y3S2 320 aaPredicted RBP21.55■■□□□ 1.04
GCDH-203ENST00000585420 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
GCDH-203ENST00000585420 GYS1P13807 737 aa21.55■■□□□ 1.04
GCDH-203ENST00000585420 IL6STP40189 918 aaPredicted RBP21.55■■□□□ 1.04
GCDH-203ENST00000585420 PPP1R1BQ9UD71 204 aaPredicted RBP21.55■■□□□ 1.04
GCDH-203ENST00000585420 NBPF26B4DH59 902 aa21.54■■□□□ 1.04
GCDH-203ENST00000585420 POLD1P28340 1107 aa21.54■■□□□ 1.04
GCDH-203ENST00000585420 EXOSC9Q06265 439 aaKnown RBP21.54■■□□□ 1.04
GCDH-203ENST00000585420 NBPF10Q6P3W6 841 aaKnown RBP21.54■■□□□ 1.04
GCDH-203ENST00000585420 NBPF15Q8N660 670 aa21.54■■□□□ 1.04
GCDH-203ENST00000585420 USP42Q9H9J4 1324 aaKnown RBP21.54■■□□□ 1.04
GCDH-203ENST00000585420 COL24A1Q17RW2 1714 aa21.53■■□□□ 1.04
GCDH-203ENST00000585420 ARXQ96QS3 562 aa21.52■■□□□ 1.04
GCDH-203ENST00000585420 EIF2S2P20042 333 aaKnown RBP21.52■■□□□ 1.03
GCDH-203ENST00000585420 USPL1Q5W0Q7 1092 aa21.52■■□□□ 1.03
GCDH-203ENST00000585420 LAMB4A4D0S4 1761 aa21.51■■□□□ 1.03
GCDH-203ENST00000585420 ZPR1O75312 459 aa21.51■■□□□ 1.03
GCDH-203ENST00000585420 FKBP8Q14318 412 aa21.51■■□□□ 1.03
GCDH-203ENST00000585420 NARFQ9UHQ1 456 aa21.51■■□□□ 1.03
GCDH-203ENST00000585420 TBC1D2BQ9UPU7 963 aa21.51■■□□□ 1.03
GCDH-203ENST00000585420 NLGN1Q8N2Q7 840 aa21.5■■□□□ 1.03
GCDH-203ENST00000585420 RCAN3Q9UKA8 241 aa21.5■■□□□ 1.03
GCDH-203ENST00000585420 NECTIN2Q92692 538 aa21.49■■□□□ 1.03
GCDH-203ENST00000585420 A0A087WZG4 1122 aa21.49■■□□□ 1.03
GCDH-203ENST00000585420 NPM2Q86SE8 214 aaKnown RBP21.49■■□□□ 1.03
GCDH-203ENST00000585420 BCL2L12Q9HB09 334 aa21.49■■□□□ 1.03
GCDH-203ENST00000585420 MMP10P09238 476 aa21.48■■□□□ 1.03
GCDH-203ENST00000585420 ELL2O00472 640 aaPredicted RBP21.47■■□□□ 1.03
GCDH-203ENST00000585420 MYL6BP14649 208 aa21.47■■□□□ 1.03
GCDH-203ENST00000585420 FHDC1Q9C0D6 1143 aaPredicted RBP21.47■■□□□ 1.03
GCDH-203ENST00000585420 CT47B1P0C2W7 299 aaPredicted RBP21.46■■□□□ 1.03
GCDH-203ENST00000585420 PDIA6Q15084 440 aa21.46■■□□□ 1.03
GCDH-203ENST00000585420 DZIP3Q86Y13 1208 aaKnown RBP21.46■■□□□ 1.03
GCDH-203ENST00000585420 C8orf58Q8NAV2 365 aa21.46■■□□□ 1.03
GCDH-203ENST00000585420 TSPYL6Q8N831 410 aa21.46■■□□□ 1.03
GCDH-203ENST00000585420 CAMTA2O94983 1202 aa21.45■■□□□ 1.02
GCDH-203ENST00000585420 ANXA1P04083 346 aa21.45■■□□□ 1.02
GCDH-203ENST00000585420 HOXB7P09629 217 aa21.45■■□□□ 1.02
GCDH-203ENST00000585420 PROSER3Q2NL68 480 aa21.45■■□□□ 1.02
GCDH-203ENST00000585420 TWISTNBQ3B726 338 aaPredicted RBP21.45■■□□□ 1.02
GCDH-203ENST00000585420 SUPT16HQ9Y5B9 1047 aaKnown RBP21.45■■□□□ 1.02
GCDH-203ENST00000585420 HDGFL1Q5TGJ6 251 aa21.44■■□□□ 1.02
GCDH-203ENST00000585420 SYT17Q9BSW7 474 aa21.44■■□□□ 1.02
GCDH-203ENST00000585420 ERBB4Q15303 1308 aa21.44■■□□□ 1.02
GCDH-203ENST00000585420 TM4SF1P30408 202 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms