RNA–Protein interactions for RNA: ENST00000584192.5

NARF-223, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-223	ENST00000584192	CCDC87	Q9NVE4	849 aa		18.93	■□□□□ 0.62
NARF-223	ENST00000584192	RPS6KA4	O75676	772 aa		18.92	■□□□□ 0.62
NARF-223	ENST00000584192	ZNF853	P0CG23	659 aa		18.92	■□□□□ 0.62
NARF-223	ENST00000584192	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.92	■□□□□ 0.62	1e-8	■□□□□ 8.8
NARF-223	ENST00000584192	WDR63	Q8IWG1	891 aa		18.92	■□□□□ 0.62
NARF-223	ENST00000584192	MBIP	Q9NS73	344 aa		18.92	■□□□□ 0.62
NARF-223	ENST00000584192	IL16	Q14005	1332 aa		18.92	■□□□□ 0.62
NARF-223	ENST00000584192	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.91	■□□□□ 0.62
NARF-223	ENST00000584192	MSH5	O43196	834 aa		18.91	■□□□□ 0.62
NARF-223	ENST00000584192	GIGYF1	O75420	1035 aa	Predicted RBP	18.91	■□□□□ 0.62
NARF-223	ENST00000584192	PHF14	O94880	888 aa		18.91	■□□□□ 0.62
NARF-223	ENST00000584192	ADRA2B	P18089	450 aa		18.91	■□□□□ 0.62
NARF-223	ENST00000584192	INTS5	Q6P9B9	1019 aa	Known RBP	18.91	■□□□□ 0.62
NARF-223	ENST00000584192	PRAMEF22	A3QJZ6	481 aa		18.9	■□□□□ 0.62
NARF-223	ENST00000584192	TRAPPC3L	Q5T215	181 aa		18.9	■□□□□ 0.62
NARF-223	ENST00000584192	COL23A1	Q86Y22	540 aa	Predicted RBP	18.9	■□□□□ 0.62
NARF-223	ENST00000584192	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.9	■□□□□ 0.62
NARF-223	ENST00000584192	USP16	Q9Y5T5	823 aa		18.9	■□□□□ 0.62
NARF-223	ENST00000584192	AMIGO3	Q86WK7	504 aa		18.89	■□□□□ 0.61
NARF-223	ENST00000584192	SLC16A10	Q8TF71	515 aa		18.89	■□□□□ 0.61
NARF-223	ENST00000584192	ZBTB1	Q9Y2K1	713 aa		18.89	■□□□□ 0.61
NARF-223	ENST00000584192	CANX	P27824	592 aa	Known RBP	18.88	■□□□□ 0.61
NARF-223	ENST00000584192	SOS1	Q07889	1333 aa	Predicted RBP	18.88	■□□□□ 0.61
NARF-223	ENST00000584192	NPM2	Q86SE8	214 aa	Known RBP	18.87	■□□□□ 0.61
NARF-223	ENST00000584192	MTFR1L	Q9H019	292 aa		18.87	■□□□□ 0.61
NARF-223	ENST00000584192	C4A	P0C0L4	1744 aa		18.86	■□□□□ 0.61
NARF-223	ENST00000584192	ZBTB7A	O95365	584 aa		18.86	■□□□□ 0.61
NARF-223	ENST00000584192	A1BG	P04217	495 aa		18.86	■□□□□ 0.61
NARF-223	ENST00000584192	RFC4	P35249	363 aa		18.86	■□□□□ 0.61
NARF-223	ENST00000584192	SMIM5	Q71RC9	77 aa		18.86	■□□□□ 0.61
NARF-223	ENST00000584192	ARHGEF1	Q92888	912 aa	Known RBP	18.86	■□□□□ 0.61
NARF-223	ENST00000584192	COL15A1	P39059	1388 aa		18.85	■□□□□ 0.61
NARF-223	ENST00000584192	ZNF521	Q96K83	1311 aa		18.85	■□□□□ 0.61
NARF-223	ENST00000584192	HOXB7	P09629	217 aa		18.85	■□□□□ 0.61
NARF-223	ENST00000584192	IL6ST	P40189	918 aa	Predicted RBP	18.85	■□□□□ 0.61
NARF-223	ENST00000584192	TSR2	Q969E8	191 aa	Known RBP	18.85	■□□□□ 0.61
NARF-223	ENST00000584192	SPON1	Q9HCB6	807 aa		18.85	■□□□□ 0.61
NARF-223	ENST00000584192	SRCAP	Q6ZRS2	3230 aa		18.84	■□□□□ 0.61
NARF-223	ENST00000584192		A0A087WZG4	1122 aa		18.84	■□□□□ 0.61
NARF-223	ENST00000584192	EIF5	P55010	431 aa	Known RBP	18.84	■□□□□ 0.61
NARF-223	ENST00000584192	KRT24	Q2M2I5	525 aa		18.84	■□□□□ 0.61
NARF-223	ENST00000584192	MYH16	Q9H6N6	1097 aa		18.84	■□□□□ 0.61
NARF-223	ENST00000584192	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.84	■□□□□ 0.61
NARF-223	ENST00000584192	ERBB4	Q15303	1308 aa		18.83	■□□□□ 0.61
NARF-223	ENST00000584192	EIF2S2	P20042	333 aa	Known RBP	18.83	■□□□□ 0.6
NARF-223	ENST00000584192	DUSP27	Q5VZP5	1158 aa		18.83	■□□□□ 0.6
NARF-223	ENST00000584192	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.83	■□□□□ 0.6
NARF-223	ENST00000584192	FANCI	Q9NVI1	1328 aa		18.82	■□□□□ 0.6
NARF-223	ENST00000584192	GOLGA2	Q08379	1002 aa		18.82	■□□□□ 0.6
NARF-223	ENST00000584192	LRP5	O75197	1615 aa		18.82	■□□□□ 0.6
NARF-223	ENST00000584192	COL24A1	Q17RW2	1714 aa		18.81	■□□□□ 0.6
NARF-223	ENST00000584192	NBPF26	B4DH59	902 aa		18.81	■□□□□ 0.6
NARF-223	ENST00000584192	ZPR1	O75312	459 aa		18.81	■□□□□ 0.6
NARF-223	ENST00000584192	PIP4K2A	P48426	406 aa	Predicted RBP	18.81	■□□□□ 0.6
NARF-223	ENST00000584192	HDGFL1	Q5TGJ6	251 aa		18.81	■□□□□ 0.6
NARF-223	ENST00000584192	NBPF10	Q6P3W6	841 aa	Known RBP	18.81	■□□□□ 0.6
NARF-223	ENST00000584192	NBPF15	Q8N660	670 aa		18.81	■□□□□ 0.6
NARF-223	ENST00000584192	CHMP4A	Q9BY43	222 aa		18.81	■□□□□ 0.6
NARF-223	ENST00000584192	ZBED9	Q6R2W3	1325 aa		18.8	■□□□□ 0.6
NARF-223	ENST00000584192	USP42	Q9H9J4	1324 aa	Known RBP	18.8	■□□□□ 0.6
NARF-223	ENST00000584192	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.8	■□□□□ 0.6
NARF-223	ENST00000584192	NARF	Q9UHQ1	456 aa		18.8	■□□□□ 0.6
NARF-223	ENST00000584192		E9PSI1	815 aa		18.79	■□□□□ 0.6
NARF-223	ENST00000584192	ELL2	O00472	640 aa	Predicted RBP	18.79	■□□□□ 0.6
NARF-223	ENST00000584192	POLD1	P28340	1107 aa		18.79	■□□□□ 0.6
NARF-223	ENST00000584192	MSL1	Q68DK7	614 aa		18.79	■□□□□ 0.6
NARF-223	ENST00000584192	C8orf58	Q8NAV2	365 aa		18.79	■□□□□ 0.6
NARF-223	ENST00000584192	NECTIN2	Q92692	538 aa		18.79	■□□□□ 0.6
NARF-223	ENST00000584192	ARX	Q96QS3	562 aa		18.79	■□□□□ 0.6
NARF-223	ENST00000584192	MYL6B	P14649	208 aa		18.78	■□□□□ 0.6
NARF-223	ENST00000584192	NLGN1	Q8N2Q7	840 aa		18.78	■□□□□ 0.6
NARF-223	ENST00000584192	SRP68	Q9UHB9	627 aa	Known RBP	18.78	■□□□□ 0.6
NARF-223	ENST00000584192	GYS1	P13807	737 aa		18.77	■□□□□ 0.6
NARF-223	ENST00000584192	TWISTNB	Q3B726	338 aa	Predicted RBP	18.77	■□□□□ 0.6
NARF-223	ENST00000584192	USPL1	Q5W0Q7	1092 aa		18.77	■□□□□ 0.6
NARF-223	ENST00000584192	DZIP3	Q86Y13	1208 aa	Known RBP	18.77	■□□□□ 0.6
NARF-223	ENST00000584192	TSPYL6	Q8N831	410 aa		18.77	■□□□□ 0.6
NARF-223	ENST00000584192	TBC1D2B	Q9UPU7	963 aa		18.77	■□□□□ 0.6
NARF-223	ENST00000584192	SCN7A	Q01118	1682 aa		18.76	■□□□□ 0.59
NARF-223	ENST00000584192	PTGER2	P43116	358 aa		18.76	■□□□□ 0.59
NARF-223	ENST00000584192	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
NARF-223	ENST00000584192	DBF4	Q9UBU7	674 aa	Predicted RBP	18.76	■□□□□ 0.59
NARF-223	ENST00000584192	BCOR	Q6W2J9	1755 aa		18.76	■□□□□ 0.59
NARF-223	ENST00000584192	CACNA1F	O60840	1977 aa		18.75	■□□□□ 0.59
NARF-223	ENST00000584192	EXOSC9	Q06265	439 aa	Known RBP	18.75	■□□□□ 0.59
NARF-223	ENST00000584192	SLFN5	Q08AF3	891 aa		18.75	■□□□□ 0.59
NARF-223	ENST00000584192	PDIA6	Q15084	440 aa		18.75	■□□□□ 0.59
NARF-223	ENST00000584192	CCDC30	Q5VVM6	783 aa		18.75	■□□□□ 0.59
NARF-223	ENST00000584192	SGIP1	Q9BQI5	828 aa		18.75	■□□□□ 0.59
NARF-223	ENST00000584192	CHPF2	Q9P2E5	772 aa		18.75	■□□□□ 0.59
NARF-223	ENST00000584192	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.75	■□□□□ 0.59
NARF-223	ENST00000584192	PROSER3	Q2NL68	480 aa		18.74	■□□□□ 0.59
NARF-223	ENST00000584192	KIF6	Q6ZMV9	814 aa		18.74	■□□□□ 0.59
NARF-223	ENST00000584192	CAMTA2	O94983	1202 aa		18.73	■□□□□ 0.59
NARF-223	ENST00000584192	ANXA1	P04083	346 aa		18.73	■□□□□ 0.59
NARF-223	ENST00000584192	FKBP8	Q14318	412 aa		18.73	■□□□□ 0.59
NARF-223	ENST00000584192	CDCA7L	Q96GN5	454 aa		18.73	■□□□□ 0.59
NARF-223	ENST00000584192	ZNF652	Q9Y2D9	606 aa		18.73	■□□□□ 0.59
NARF-223	ENST00000584192	MMP10	P09238	476 aa		18.72	■□□□□ 0.59
NARF-223	ENST00000584192	STK31	Q9BXU1	1019 aa		18.72	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms