RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 CPSF1Q10570 1443 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-225ENST00000583438 OVOS2Q6IE36 1432 aa11.49□□□□□ -0.57
PPP4R1-225ENST00000583438 NUDT18Q6ZVK8 323 aa11.48□□□□□ -0.57
PPP4R1-225ENST00000583438 EYA1Q99502 592 aa11.48□□□□□ -0.57
PPP4R1-225ENST00000583438 KDM4CQ9H3R0 1056 aa11.48□□□□□ -0.57
PPP4R1-225ENST00000583438 CENPJQ9HC77 1338 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-225ENST00000583438 CD163L1Q9NR16 1453 aa11.48□□□□□ -0.57
PPP4R1-225ENST00000583438 COL24A1Q17RW2 1714 aa11.48□□□□□ -0.57
PPP4R1-225ENST00000583438 AATKQ6ZMQ8 1374 aa11.47□□□□□ -0.57
PPP4R1-225ENST00000583438 PACS2Q86VP3 889 aa11.47□□□□□ -0.57
PPP4R1-225ENST00000583438 MARCH10Q8NA82 808 aaPredicted RBP11.47□□□□□ -0.57
PPP4R1-225ENST00000583438 TATDN2Q93075 761 aa11.47□□□□□ -0.57
PPP4R1-225ENST00000583438 SLC4A5Q9BY07 1137 aa11.47□□□□□ -0.57
PPP4R1-225ENST00000583438 KIAA1468Q9P260 1216 aa11.47□□□□□ -0.57
PPP4R1-225ENST00000583438 PNMA3Q9UL41 463 aa11.47□□□□□ -0.57
PPP4R1-225ENST00000583438 SMAPO00193 183 aa11.46□□□□□ -0.57
PPP4R1-225ENST00000583438 EVA1CP58658 441 aa11.46□□□□□ -0.57
PPP4R1-225ENST00000583438 PDE3BQ13370 1112 aa11.46□□□□□ -0.57
PPP4R1-225ENST00000583438 RBM46Q8TBY0 533 aaKnown RBP11.46□□□□□ -0.57
PPP4R1-225ENST00000583438 CABP1Q9NZU7 370 aa11.46□□□□□ -0.57
PPP4R1-225ENST00000583438 CHD4Q14839 1912 aa11.45□□□□□ -0.58
PPP4R1-225ENST00000583438 NBPF26B4DH59 902 aa11.45□□□□□ -0.58
PPP4R1-225ENST00000583438 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-225ENST00000583438 MDM2Q00987 491 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-225ENST00000583438 TTLL12Q14166 644 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-225ENST00000583438 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
PPP4R1-225ENST00000583438 TMUB1Q9BVT8 246 aa11.45□□□□□ -0.58
PPP4R1-225ENST00000583438 VPS9D1Q9Y2B5 631 aa11.45□□□□□ -0.58
PPP4R1-225ENST00000583438 ABCC6O95255 1503 aa11.45□□□□□ -0.58
PPP4R1-225ENST00000583438 QSER1Q2KHR3 1735 aa11.44□□□□□ -0.58
PPP4R1-225ENST00000583438 FAM208AQ9UK61 1670 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-225ENST00000583438 ZBTB7CA1YPR0 619 aa11.44□□□□□ -0.58
PPP4R1-225ENST00000583438 THRAP3Q9Y2W1 955 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-225ENST00000583438 BCL9O00512 1426 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 DOT1LQ8TEK3 1739 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 WDR17Q8IZU2 1322 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 GIGYF2Q6Y7W6 1299 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 ARHGEF25Q86VW2 580 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 NLRP13Q86W25 1043 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 L3MBTL2Q969R5 705 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 SIN3AQ96ST3 1273 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 RABGEF1Q9UJ41 708 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 KAT6BQ8WYB5 2073 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
PPP4R1-225ENST00000583438 TTC21BQ7Z4L5 1316 aa11.42□□□□□ -0.58
PPP4R1-225ENST00000583438 RCCD1A6NED2 376 aa11.42□□□□□ -0.58
PPP4R1-225ENST00000583438 BRD4O60885 1362 aaPredicted RBP11.41□□□□□ -0.58
PPP4R1-225ENST00000583438 LY75O60449 1722 aa11.41□□□□□ -0.58
PPP4R1-225ENST00000583438 KCNQ2O43526 872 aa11.41□□□□□ -0.58
PPP4R1-225ENST00000583438 CLCN1P35523 988 aa11.41□□□□□ -0.58
PPP4R1-225ENST00000583438 LSM11P83369 360 aaKnown RBP eCLIP11.41□□□□□ -0.58
PPP4R1-225ENST00000583438 GPCPD1Q9NPB8 672 aa11.41□□□□□ -0.58
PPP4R1-225ENST00000583438 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
PPP4R1-225ENST00000583438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.4□□□□□ -0.58
PPP4R1-225ENST00000583438 PLSCR1O15162 318 aa11.4□□□□□ -0.58
PPP4R1-225ENST00000583438 ZBTB7AO95365 584 aa11.39□□□□□ -0.59
PPP4R1-225ENST00000583438 MS4A1P11836 297 aa11.39□□□□□ -0.59
PPP4R1-225ENST00000583438 YY1P25490 414 aa11.39□□□□□ -0.59
PPP4R1-225ENST00000583438 DDB1Q16531 1140 aa11.39□□□□□ -0.59
PPP4R1-225ENST00000583438 TOM1L2Q6ZVM7 507 aa11.39□□□□□ -0.59
PPP4R1-225ENST00000583438 FAM117AQ9C073 453 aa11.39□□□□□ -0.59
PPP4R1-225ENST00000583438 SPON1Q9HCB6 807 aa11.39□□□□□ -0.59
PPP4R1-225ENST00000583438 SEPT9Q9UHD8 586 aaPredicted RBP11.39□□□□□ -0.59
PPP4R1-225ENST00000583438 SBNO2Q9Y2G9 1366 aa11.39□□□□□ -0.59
PPP4R1-225ENST00000583438 GOLGB1Q14789 3259 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-225ENST00000583438 BHMG1C9JSJ3 638 aaPredicted RBP11.38□□□□□ -0.59
PPP4R1-225ENST00000583438 TK2O00142 265 aa11.38□□□□□ -0.59
PPP4R1-225ENST00000583438 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
PPP4R1-225ENST00000583438 IL27Q8NEV9 243 aa11.38□□□□□ -0.59
PPP4R1-225ENST00000583438 DNAJB2P25686 324 aa11.37□□□□□ -0.59
PPP4R1-225ENST00000583438 ADGRD1Q6QNK2 874 aa11.37□□□□□ -0.59
PPP4R1-225ENST00000583438 CARD10Q9BWT7 1032 aa11.37□□□□□ -0.59
PPP4R1-225ENST00000583438 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
PPP4R1-225ENST00000583438 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
PPP4R1-225ENST00000583438 NME9Q86XW9 330 aa11.36□□□□□ -0.59
PPP4R1-225ENST00000583438 FAM217BQ9NTX9 383 aaPredicted RBP11.36□□□□□ -0.59
PPP4R1-225ENST00000583438 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
PPP4R1-225ENST00000583438 TAF1LQ8IZX4 1826 aa11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 SSTR3P32745 418 aaPredicted RBP11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 TXNRD1Q16881 649 aa11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 ZNF827Q17R98 1081 aa11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 KRTAP3-3Q9BYR6 98 aa11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 KRTAP3-2Q9BYR7 98 aa11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 TMEM134Q9H6X4 195 aa11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 KTN1Q86UP2 1357 aaKnown RBP11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
PPP4R1-225ENST00000583438 ROCK2O75116 1388 aaKnown RBP11.34□□□□□ -0.59
PPP4R1-225ENST00000583438 NSD2O96028 1365 aa11.34□□□□□ -0.59
PPP4R1-225ENST00000583438 POTEGQ6S5H5 508 aa11.34□□□□□ -0.59
PPP4R1-225ENST00000583438 ANKRD13DQ6ZTN6 518 aa11.34□□□□□ -0.59
PPP4R1-225ENST00000583438 ACSBG1Q96GR2 724 aa11.34□□□□□ -0.59
PPP4R1-225ENST00000583438 LRRC4BQ9NT99 713 aa11.34□□□□□ -0.59
PPP4R1-225ENST00000583438 TTC21AQ8NDW8 1320 aa11.34□□□□□ -0.59
PPP4R1-225ENST00000583438 HRO43593 1189 aa11.33□□□□□ -0.6
PPP4R1-225ENST00000583438 SLC15A2Q16348 729 aa11.33□□□□□ -0.6
PPP4R1-225ENST00000583438 FHDC1Q9C0D6 1143 aaPredicted RBP11.33□□□□□ -0.6
PPP4R1-225ENST00000583438 ITGB4P16144 1822 aa11.32□□□□□ -0.6
PPP4R1-225ENST00000583438 A0A1W2PP64 1363 aa11.32□□□□□ -0.6
PPP4R1-225ENST00000583438 CCDC7Q96M83 1385 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms