RNA–Protein interactions for RNA: ENST00000582276.1

PGAP3-208, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-208ENST00000582276 INTS5Q6P9B9 1019 aaKnown RBP23.78■■□□□ 1.4
PGAP3-208ENST00000582276 BABAM1Q9NWV8 329 aa23.78■■□□□ 1.4
PGAP3-208ENST00000582276 ATF5Q9Y2D1 282 aaPredicted RBP23.78■■□□□ 1.4
PGAP3-208ENST00000582276 RPS6KA4O75676 772 aa23.77■■□□□ 1.4
PGAP3-208ENST00000582276 EIF4A1P60842 406 aaKnown RBP23.77■■□□□ 1.4
PGAP3-208ENST00000582276 CHL1O00533 1208 aa23.76■■□□□ 1.39
PGAP3-208ENST00000582276 CCDC27Q2M243 656 aa23.76■■□□□ 1.39
PGAP3-208ENST00000582276 TRAPPC3LQ5T215 181 aa23.76■■□□□ 1.39
PGAP3-208ENST00000582276 SPON1Q9HCB6 807 aa23.76■■□□□ 1.39
PGAP3-208ENST00000582276 USP16Q9Y5T5 823 aa23.76■■□□□ 1.39
PGAP3-208ENST00000582276 WWC1Q8IX03 1113 aa23.75■■□□□ 1.39
PGAP3-208ENST00000582276 SLC16A10Q8TF71 515 aa23.75■■□□□ 1.39
PGAP3-208ENST00000582276 CFAP44Q96MT7 982 aa23.75■■□□□ 1.39
PGAP3-208ENST00000582276 MTFR1LQ9H019 292 aa23.75■■□□□ 1.39
PGAP3-208ENST00000582276 CANXP27824 592 aaKnown RBP23.74■■□□□ 1.39
PGAP3-208ENST00000582276 ZBTB1Q9Y2K1 713 aa23.74■■□□□ 1.39
PGAP3-208ENST00000582276 GNAI1P63096 354 aa23.73■■□□□ 1.39
PGAP3-208ENST00000582276 NCBP3Q53F19 620 aaKnown RBP23.73■■□□□ 1.39
PGAP3-208ENST00000582276 ARHGEF1Q92888 912 aaKnown RBP23.73■■□□□ 1.39
PGAP3-208ENST00000582276 IFT57Q9NWB7 429 aa23.73■■□□□ 1.39
PGAP3-208ENST00000582276 GIGYF1O75420 1035 aaPredicted RBP23.72■■□□□ 1.39
PGAP3-208ENST00000582276 A1BGP04217 495 aa23.72■■□□□ 1.39
PGAP3-208ENST00000582276 ADRA2BP18089 450 aa23.72■■□□□ 1.39
PGAP3-208ENST00000582276 RFC4P35249 363 aa23.71■■□□□ 1.39
PGAP3-208ENST00000582276 MSL1Q68DK7 614 aa23.71■■□□□ 1.39
PGAP3-208ENST00000582276 MBIPQ9NS73 344 aa23.71■■□□□ 1.39
PGAP3-208ENST00000582276 ZNF330Q9Y3S2 320 aaPredicted RBP23.71■■□□□ 1.39
PGAP3-208ENST00000582276 SOS1Q07889 1333 aaPredicted RBP23.7■■□□□ 1.38
PGAP3-208ENST00000582276 ZNF853P0CG23 659 aa23.7■■□□□ 1.38
PGAP3-208ENST00000582276 PIP4K2AP48426 406 aaPredicted RBP23.69■■□□□ 1.38
PGAP3-208ENST00000582276 NGEFQ8N5V2 710 aa23.68■■□□□ 1.38
PGAP3-208ENST00000582276 KRT24Q2M2I5 525 aa23.67■■□□□ 1.38
PGAP3-208ENST00000582276 NPM2Q86SE8 214 aaKnown RBP23.67■■□□□ 1.38
PGAP3-208ENST00000582276 COL15A1P39059 1388 aa23.66■■□□□ 1.38
PGAP3-208ENST00000582276 LAMB4A4D0S4 1761 aa23.66■■□□□ 1.38
PGAP3-208ENST00000582276 EIF2S2P20042 333 aaKnown RBP23.66■■□□□ 1.38
PGAP3-208ENST00000582276 PTGER2P43116 358 aa23.66■■□□□ 1.38
PGAP3-208ENST00000582276 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
PGAP3-208ENST00000582276 PPP1R1BQ9UD71 204 aaPredicted RBP23.66■■□□□ 1.38
PGAP3-208ENST00000582276 IL16Q14005 1332 aa23.65■■□□□ 1.38
PGAP3-208ENST00000582276 POLD1P28340 1107 aa23.65■■□□□ 1.38
PGAP3-208ENST00000582276 IL6STP40189 918 aaPredicted RBP23.65■■□□□ 1.38
PGAP3-208ENST00000582276 EIF5P55010 431 aaKnown RBP23.65■■□□□ 1.38
PGAP3-208ENST00000582276 ARXQ96QS3 562 aa23.65■■□□□ 1.38
PGAP3-208ENST00000582276 SRP68Q9UHB9 627 aaKnown RBP23.65■■□□□ 1.38
PGAP3-208ENST00000582276 C4AP0C0L4 1744 aa23.64■■□□□ 1.38
PGAP3-208ENST00000582276 A0A087WZG4 1122 aa23.64■■□□□ 1.37
PGAP3-208ENST00000582276 ZPR1O75312 459 aa23.64■■□□□ 1.37
PGAP3-208ENST00000582276 TSR2Q969E8 191 aaKnown RBP23.64■■□□□ 1.37
PGAP3-208ENST00000582276 NBPF26B4DH59 902 aa23.63■■□□□ 1.37
PGAP3-208ENST00000582276 NBPF10Q6P3W6 841 aaKnown RBP23.63■■□□□ 1.37
PGAP3-208ENST00000582276 NBPF15Q8N660 670 aa23.63■■□□□ 1.37
PGAP3-208ENST00000582276 NECTIN2Q92692 538 aa23.63■■□□□ 1.37
PGAP3-208ENST00000582276 USP42Q9H9J4 1324 aaKnown RBP23.62■■□□□ 1.37
PGAP3-208ENST00000582276 GYS1P13807 737 aa23.62■■□□□ 1.37
PGAP3-208ENST00000582276 SGIP1Q9BQI5 828 aa23.62■■□□□ 1.37
PGAP3-208ENST00000582276 ELL2O00472 640 aaPredicted RBP23.61■■□□□ 1.37
PGAP3-208ENST00000582276 DUSP27Q5VZP5 1158 aa23.61■■□□□ 1.37
PGAP3-208ENST00000582276 USPL1Q5W0Q7 1092 aa23.61■■□□□ 1.37
PGAP3-208ENST00000582276 NARFQ9UHQ1 456 aa23.61■■□□□ 1.37
PGAP3-208ENST00000582276 TBC1D2BQ9UPU7 963 aa23.61■■□□□ 1.37
PGAP3-208ENST00000582276 MYL6BP14649 208 aa23.6■■□□□ 1.37
PGAP3-208ENST00000582276 NLGN1Q8N2Q7 840 aa23.6■■□□□ 1.37
PGAP3-208ENST00000582276 HOXB7P09629 217 aa23.58■■□□□ 1.37
PGAP3-208ENST00000582276 DZIP3Q86Y13 1208 aaKnown RBP23.58■■□□□ 1.37
PGAP3-208ENST00000582276 C8orf58Q8NAV2 365 aa23.58■■□□□ 1.37
PGAP3-208ENST00000582276 COL24A1Q17RW2 1714 aa23.58■■□□□ 1.37
PGAP3-208ENST00000582276 FKBP8Q14318 412 aa23.57■■□□□ 1.36
PGAP3-208ENST00000582276 HDGFL1Q5TGJ6 251 aa23.57■■□□□ 1.36
PGAP3-208ENST00000582276 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
PGAP3-208ENST00000582276 ERBB4Q15303 1308 aa23.57■■□□□ 1.36
PGAP3-208ENST00000582276 ZNF521Q96K83 1311 aa23.57■■□□□ 1.36
PGAP3-208ENST00000582276 FANCIQ9NVI1 1328 aa23.57■■□□□ 1.36
PGAP3-208ENST00000582276 MMP10P09238 476 aa23.56■■□□□ 1.36
PGAP3-208ENST00000582276 KLHL34Q8N239 644 aa23.56■■□□□ 1.36
PGAP3-208ENST00000582276 MYH16Q9H6N6 1097 aa23.56■■□□□ 1.36
PGAP3-208ENST00000582276 ANXA1P04083 346 aa23.55■■□□□ 1.36
PGAP3-208ENST00000582276 GOLGA2Q08379 1002 aa23.55■■□□□ 1.36
PGAP3-208ENST00000582276 PDIA6Q15084 440 aa23.54■■□□□ 1.36
PGAP3-208ENST00000582276 TSPYL6Q8N831 410 aa23.54■■□□□ 1.36
PGAP3-208ENST00000582276 BCL2L12Q9HB09 334 aa23.54■■□□□ 1.36
PGAP3-208ENST00000582276 CAMTA2O94983 1202 aa23.53■■□□□ 1.36
PGAP3-208ENST00000582276 PROSER3Q2NL68 480 aa23.53■■□□□ 1.36
PGAP3-208ENST00000582276 CHPF2Q9P2E5 772 aa23.53■■□□□ 1.36
PGAP3-208ENST00000582276 PARP3Q9Y6F1 533 aa23.53■■□□□ 1.36
PGAP3-208ENST00000582276 BICDL1Q6ZP65 573 aa23.52■■□□□ 1.36
PGAP3-208ENST00000582276 EXOSC9Q06265 439 aaKnown RBP23.51■■□□□ 1.35
PGAP3-208ENST00000582276 TWISTNBQ3B726 338 aaPredicted RBP23.51■■□□□ 1.35
PGAP3-208ENST00000582276 KIF6Q6ZMV9 814 aa23.51■■□□□ 1.35
PGAP3-208ENST00000582276 TTLL7Q6ZT98 887 aa23.51■■□□□ 1.35
PGAP3-208ENST00000582276 FHDC1Q9C0D6 1143 aaPredicted RBP23.51■■□□□ 1.35
PGAP3-208ENST00000582276 DDX21Q9NR30 783 aaKnown RBP eCLIP23.51■■□□□ 1.35
PGAP3-208ENST00000582276 HNRNPUQ00839 825 aaKnown RBP eCLIP23.5■■□□□ 1.35
PGAP3-208ENST00000582276 DBF4Q9UBU7 674 aaPredicted RBP23.5■■□□□ 1.35
PGAP3-208ENST00000582276 SCN7AQ01118 1682 aa23.5■■□□□ 1.35
PGAP3-208ENST00000582276 TM4SF1P30408 202 aa23.49■■□□□ 1.35
PGAP3-208ENST00000582276 AIMP1Q12904 312 aaKnown RBP23.49■■□□□ 1.35
PGAP3-208ENST00000582276 NFIXQ14938 502 aa23.49■■□□□ 1.35
PGAP3-208ENST00000582276 CHMP4AQ9BY43 222 aa23.49■■□□□ 1.35
PGAP3-208ENST00000582276 E9PSI1 815 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms