RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.32
CDC42EP4-207ENST00000581045 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP4-207ENST00000581045 RC3H1Q5TC82 1133 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-207ENST00000581045 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP4-207ENST00000581045 ZBTB1Q9Y2K1 713 aa17.01■□□□□ 0.31
CDC42EP4-207ENST00000581045 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
CDC42EP4-207ENST00000581045 CHL1O00533 1208 aa17■□□□□ 0.31
CDC42EP4-207ENST00000581045 A1BGP04217 495 aa17■□□□□ 0.31
CDC42EP4-207ENST00000581045 SSFA2P28290 1259 aa17■□□□□ 0.31
CDC42EP4-207ENST00000581045 CCDC27Q2M243 656 aa17■□□□□ 0.31
CDC42EP4-207ENST00000581045 KRT24Q2M2I5 525 aa17■□□□□ 0.31
CDC42EP4-207ENST00000581045 MSL1Q68DK7 614 aa17■□□□□ 0.31
CDC42EP4-207ENST00000581045 CFAP44Q96MT7 982 aa17■□□□□ 0.31
CDC42EP4-207ENST00000581045 TEX13AQ9BXU3 409 aaPredicted RBP17■□□□□ 0.31
CDC42EP4-207ENST00000581045 MBIPQ9NS73 344 aa17■□□□□ 0.31
CDC42EP4-207ENST00000581045 IFT57Q9NWB7 429 aa17■□□□□ 0.31
CDC42EP4-207ENST00000581045 RPS6KA4O75676 772 aa16.99■□□□□ 0.31
CDC42EP4-207ENST00000581045 GNAI1P63096 354 aa16.99■□□□□ 0.31
CDC42EP4-207ENST00000581045 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
CDC42EP4-207ENST00000581045 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
CDC42EP4-207ENST00000581045 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
CDC42EP4-207ENST00000581045 FLAD1Q8NFF5 587 aa16.98■□□□□ 0.31
CDC42EP4-207ENST00000581045 NECTIN2Q92692 538 aa16.98■□□□□ 0.31
CDC42EP4-207ENST00000581045 TSR2Q969E8 191 aaKnown RBP16.98■□□□□ 0.31
CDC42EP4-207ENST00000581045 LRP5O75197 1615 aa16.97■□□□□ 0.31
CDC42EP4-207ENST00000581045 ZNF853P0CG23 659 aa16.97■□□□□ 0.31
CDC42EP4-207ENST00000581045 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
CDC42EP4-207ENST00000581045 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
CDC42EP4-207ENST00000581045 ARXQ96QS3 562 aa16.97■□□□□ 0.31
CDC42EP4-207ENST00000581045 COL15A1P39059 1388 aa16.97■□□□□ 0.31
CDC42EP4-207ENST00000581045 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP4-207ENST00000581045 RFC4P35249 363 aa16.96■□□□□ 0.31
CDC42EP4-207ENST00000581045 MTFR1LQ9H019 292 aa16.96■□□□□ 0.31
CDC42EP4-207ENST00000581045 SPON1Q9HCB6 807 aa16.96■□□□□ 0.31
CDC42EP4-207ENST00000581045 ELL2O00472 640 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP4-207ENST00000581045 SRP68Q9UHB9 627 aaKnown RBP16.95■□□□□ 0.3
CDC42EP4-207ENST00000581045 ADRA2BP18089 450 aa16.94■□□□□ 0.3
CDC42EP4-207ENST00000581045 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
CDC42EP4-207ENST00000581045 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
CDC42EP4-207ENST00000581045 WDR63Q8IWG1 891 aa16.94■□□□□ 0.3
CDC42EP4-207ENST00000581045 NGEFQ8N5V2 710 aa16.94■□□□□ 0.3
CDC42EP4-207ENST00000581045 MYL6BP14649 208 aa16.93■□□□□ 0.3
CDC42EP4-207ENST00000581045 SLC16A10Q8TF71 515 aa16.93■□□□□ 0.3
CDC42EP4-207ENST00000581045 IL16Q14005 1332 aa16.93■□□□□ 0.3
CDC42EP4-207ENST00000581045 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
CDC42EP4-207ENST00000581045 SCN7AQ01118 1682 aa16.92■□□□□ 0.3
CDC42EP4-207ENST00000581045 NBPF26B4DH59 902 aa16.92■□□□□ 0.3
CDC42EP4-207ENST00000581045 DUSP27Q5VZP5 1158 aa16.92■□□□□ 0.3
CDC42EP4-207ENST00000581045 NBPF10Q6P3W6 841 aaKnown RBP16.92■□□□□ 0.3
CDC42EP4-207ENST00000581045 NBPF15Q8N660 670 aa16.92■□□□□ 0.3
CDC42EP4-207ENST00000581045 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP4-207ENST00000581045 PPP1R1BQ9UD71 204 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP4-207ENST00000581045 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
CDC42EP4-207ENST00000581045 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
CDC42EP4-207ENST00000581045 ZPR1O75312 459 aa16.91■□□□□ 0.3
CDC42EP4-207ENST00000581045 ANXA1P04083 346 aa16.91■□□□□ 0.3
CDC42EP4-207ENST00000581045 IL6STP40189 918 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP4-207ENST00000581045 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
CDC42EP4-207ENST00000581045 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDC42EP4-207ENST00000581045 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
CDC42EP4-207ENST00000581045 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
CDC42EP4-207ENST00000581045 TBC1D2BQ9UPU7 963 aa16.91■□□□□ 0.3
CDC42EP4-207ENST00000581045 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
CDC42EP4-207ENST00000581045 POLD1P28340 1107 aa16.9■□□□□ 0.3
CDC42EP4-207ENST00000581045 PTGER2P43116 358 aa16.9■□□□□ 0.3
CDC42EP4-207ENST00000581045 HDGFL1Q5TGJ6 251 aa16.9■□□□□ 0.3
CDC42EP4-207ENST00000581045 ZNF521Q96K83 1311 aa16.9■□□□□ 0.3
CDC42EP4-207ENST00000581045 A0A087WZG4 1122 aa16.89■□□□□ 0.29
CDC42EP4-207ENST00000581045 GYS1P13807 737 aa16.89■□□□□ 0.29
CDC42EP4-207ENST00000581045 DZIP3Q86Y13 1208 aaKnown RBP16.89■□□□□ 0.29
CDC42EP4-207ENST00000581045 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
CDC42EP4-207ENST00000581045 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
CDC42EP4-207ENST00000581045 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
CDC42EP4-207ENST00000581045 FKBP8Q14318 412 aa16.88■□□□□ 0.29
CDC42EP4-207ENST00000581045 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
CDC42EP4-207ENST00000581045 MYH16Q9H6N6 1097 aa16.88■□□□□ 0.29
CDC42EP4-207ENST00000581045 CHPF2Q9P2E5 772 aa16.88■□□□□ 0.29
CDC42EP4-207ENST00000581045 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
CDC42EP4-207ENST00000581045 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
CDC42EP4-207ENST00000581045 TCERG1O14776 1098 aaKnown RBP16.86■□□□□ 0.29
CDC42EP4-207ENST00000581045 MMP10P09238 476 aa16.86■□□□□ 0.29
CDC42EP4-207ENST00000581045 HOXB7P09629 217 aa16.86■□□□□ 0.29
CDC42EP4-207ENST00000581045 TWISTNBQ3B726 338 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP4-207ENST00000581045 BICDL1Q6ZP65 573 aa16.86■□□□□ 0.29
CDC42EP4-207ENST00000581045 CDCA7LQ96GN5 454 aa16.86■□□□□ 0.29
CDC42EP4-207ENST00000581045 SGIP1Q9BQI5 828 aa16.86■□□□□ 0.29
CDC42EP4-207ENST00000581045 NUP98P52948 1817 aa16.86■□□□□ 0.29
CDC42EP4-207ENST00000581045 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-207ENST00000581045 PDIA6Q15084 440 aa16.85■□□□□ 0.29
CDC42EP4-207ENST00000581045 TTLL7Q6ZT98 887 aa16.85■□□□□ 0.29
CDC42EP4-207ENST00000581045 NLGN1Q8N2Q7 840 aa16.85■□□□□ 0.29
CDC42EP4-207ENST00000581045 BCL2L12Q9HB09 334 aa16.85■□□□□ 0.29
CDC42EP4-207ENST00000581045 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
CDC42EP4-207ENST00000581045 AFDNP55196 1824 aaKnown RBP16.84■□□□□ 0.29
CDC42EP4-207ENST00000581045 CAMTA2O94983 1202 aa16.84■□□□□ 0.29
CDC42EP4-207ENST00000581045 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
CDC42EP4-207ENST00000581045 E9PSI1 815 aa16.83■□□□□ 0.28
CDC42EP4-207ENST00000581045 ZBTB3Q9H5J0 574 aa16.83■□□□□ 0.28
CDC42EP4-207ENST00000581045 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
CDC42EP4-207ENST00000581045 SRCAPQ6ZRS2 3230 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms