RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 LAS1LQ9Y4W2 734 aaKnown RBP28.25■■■□□ 2.11
TSEN54-207ENST00000580013 COL5A3P25940 1745 aaPredicted RBP28.25■■■□□ 2.11
TSEN54-207ENST00000580013 MYH14Q7Z406 1995 aaKnown RBP28.24■■■□□ 2.11
TSEN54-207ENST00000580013 STARD3NLO95772 234 aa28.24■■■□□ 2.11
TSEN54-207ENST00000580013 CCDC87Q9NVE4 849 aa28.23■■■□□ 2.11
TSEN54-207ENST00000580013 GNPATO15228 680 aa28.22■■■□□ 2.11
TSEN54-207ENST00000580013 SSFA2P28290 1259 aa28.22■■■□□ 2.11
TSEN54-207ENST00000580013 FLAD1Q8NFF5 587 aa28.22■■■□□ 2.11
TSEN54-207ENST00000580013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.21■■■□□ 2.11
TSEN54-207ENST00000580013 A1BGP04217 495 aa28.2■■■□□ 2.1
TSEN54-207ENST00000580013 SPINK5Q9NQ38 1064 aaPredicted RBP28.2■■■□□ 2.1
TSEN54-207ENST00000580013 RTCBQ9Y3I0 505 aaKnown RBP28.2■■■□□ 2.1
TSEN54-207ENST00000580013 QSER1Q2KHR3 1735 aa28.19■■■□□ 2.1
TSEN54-207ENST00000580013 KRT24Q2M2I5 525 aa28.19■■■□□ 2.1
TSEN54-207ENST00000580013 ZBTB1Q9Y2K1 713 aa28.19■■■□□ 2.1
TSEN54-207ENST00000580013 SLC16A10Q8TF71 515 aa28.18■■■□□ 2.1
TSEN54-207ENST00000580013 ARHGEF1Q92888 912 aaKnown RBP28.18■■■□□ 2.1
TSEN54-207ENST00000580013 UBR3Q6ZT12 1888 aa28.18■■■□□ 2.1
TSEN54-207ENST00000580013 TUBGCP6Q96RT7 1819 aa28.18■■■□□ 2.1
TSEN54-207ENST00000580013 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
TSEN54-207ENST00000580013 CASZ1Q86V15 1759 aa28.17■■■□□ 2.1
TSEN54-207ENST00000580013 ADRA2BP18089 450 aa28.17■■■□□ 2.1
TSEN54-207ENST00000580013 EIF5P55010 431 aaKnown RBP28.17■■■□□ 2.1
TSEN54-207ENST00000580013 TRAPPC3LQ5T215 181 aa28.17■■■□□ 2.1
TSEN54-207ENST00000580013 NBPF26B4DH59 902 aa28.16■■■□□ 2.1
TSEN54-207ENST00000580013 NBPF10Q6P3W6 841 aaKnown RBP28.16■■■□□ 2.1
TSEN54-207ENST00000580013 NBPF15Q8N660 670 aa28.16■■■□□ 2.1
TSEN54-207ENST00000580013 PHF14O94880 888 aa28.14■■■□□ 2.1
TSEN54-207ENST00000580013 HOXB7P09629 217 aa28.13■■■□□ 2.09
TSEN54-207ENST00000580013 CANXP27824 592 aaKnown RBP28.13■■■□□ 2.09
TSEN54-207ENST00000580013 IL6STP40189 918 aaPredicted RBP28.13■■■□□ 2.09
TSEN54-207ENST00000580013 C8orf58Q8NAV2 365 aa28.13■■■□□ 2.09
TSEN54-207ENST00000580013 TSR2Q969E8 191 aaKnown RBP28.13■■■□□ 2.09
TSEN54-207ENST00000580013 DUSP27Q5VZP5 1158 aa28.12■■■□□ 2.09
TSEN54-207ENST00000580013 MTFR1LQ9H019 292 aa28.12■■■□□ 2.09
TSEN54-207ENST00000580013 ZBTB7AO95365 584 aa28.11■■■□□ 2.09
TSEN54-207ENST00000580013 PDIA6Q15084 440 aa28.11■■■□□ 2.09
TSEN54-207ENST00000580013 SGIP1Q9BQI5 828 aa28.11■■■□□ 2.09
TSEN54-207ENST00000580013 PIP4K2AP48426 406 aaPredicted RBP28.09■■■□□ 2.09
TSEN54-207ENST00000580013 LRP10Q7Z4F1 713 aa28.09■■■□□ 2.09
TSEN54-207ENST00000580013 MSH5O43196 834 aa28.08■■■□□ 2.09
TSEN54-207ENST00000580013 PTGER2P43116 358 aa28.08■■■□□ 2.09
TSEN54-207ENST00000580013 TSPYL6Q8N831 410 aa28.08■■■□□ 2.09
TSEN54-207ENST00000580013 ATF5Q9Y2D1 282 aaPredicted RBP28.08■■■□□ 2.09
TSEN54-207ENST00000580013 FANCIQ9NVI1 1328 aa28.08■■■□□ 2.09
TSEN54-207ENST00000580013 EIF2S2P20042 333 aaKnown RBP28.07■■■□□ 2.08
TSEN54-207ENST00000580013 RFC4P35249 363 aa28.07■■■□□ 2.08
TSEN54-207ENST00000580013 GOLGA2Q08379 1002 aa28.07■■■□□ 2.08
TSEN54-207ENST00000580013 TRMT2AQ8IZ69 625 aaKnown RBP28.07■■■□□ 2.08
TSEN54-207ENST00000580013 SPON1Q9HCB6 807 aa28.07■■■□□ 2.08
TSEN54-207ENST00000580013 ERBB4Q15303 1308 aa28.07■■■□□ 2.08
TSEN54-207ENST00000580013 SLFN5Q08AF3 891 aa28.06■■■□□ 2.08
TSEN54-207ENST00000580013 NARFQ9UHQ1 456 aa28.06■■■□□ 2.08
TSEN54-207ENST00000580013 COL15A1P39059 1388 aa28.06■■■□□ 2.08
TSEN54-207ENST00000580013 A0A087WZG4 1122 aa28.05■■■□□ 2.08
TSEN54-207ENST00000580013 GYS1P13807 737 aa28.05■■■□□ 2.08
TSEN54-207ENST00000580013 USP42Q9H9J4 1324 aaKnown RBP28.05■■■□□ 2.08
TSEN54-207ENST00000580013 SRP68Q9UHB9 627 aaKnown RBP28.05■■■□□ 2.08
TSEN54-207ENST00000580013 SRCAPQ6ZRS2 3230 aa28.05■■■□□ 2.08
TSEN54-207ENST00000580013 ELL2O00472 640 aaPredicted RBP28.04■■■□□ 2.08
TSEN54-207ENST00000580013 MYH16Q9H6N6 1097 aa28.04■■■□□ 2.08
TSEN54-207ENST00000580013 BCL2L12Q9HB09 334 aa28.04■■■□□ 2.08
TSEN54-207ENST00000580013 CDCA7LQ96GN5 454 aa28.03■■■□□ 2.08
TSEN54-207ENST00000580013 E9PSI1 815 aa28.02■■■□□ 2.08
TSEN54-207ENST00000580013 PROSER3Q2NL68 480 aa28.02■■■□□ 2.08
TSEN54-207ENST00000580013 LAMB4A4D0S4 1761 aa28.01■■■□□ 2.08
TSEN54-207ENST00000580013 COL24A1Q17RW2 1714 aa28.01■■■□□ 2.07
TSEN54-207ENST00000580013 VAMP4O75379 141 aa28.01■■■□□ 2.07
TSEN54-207ENST00000580013 EXOSC9Q06265 439 aaKnown RBP28.01■■■□□ 2.07
TSEN54-207ENST00000580013 HDGFL1Q5TGJ6 251 aa28.01■■■□□ 2.07
TSEN54-207ENST00000580013 NECTIN2Q92692 538 aa28.01■■■□□ 2.07
TSEN54-207ENST00000580013 DDX21Q9NR30 783 aaKnown RBP eCLIP28.01■■■□□ 2.07
TSEN54-207ENST00000580013 TBC1D2BQ9UPU7 963 aa28.01■■■□□ 2.07
TSEN54-207ENST00000580013 HNRNPUQ00839 825 aaKnown RBP eCLIP28■■■□□ 2.07
TSEN54-207ENST00000580013 USPL1Q5W0Q7 1092 aa28■■■□□ 2.07
TSEN54-207ENST00000580013 NLGN1Q8N2Q7 840 aa28■■■□□ 2.07
TSEN54-207ENST00000580013 ZPR1O75312 459 aa27.99■■■□□ 2.07
TSEN54-207ENST00000580013 CAMTA2O94983 1202 aa27.99■■■□□ 2.07
TSEN54-207ENST00000580013 FKBP8Q14318 412 aa27.99■■■□□ 2.07
TSEN54-207ENST00000580013 TWISTNBQ3B726 338 aaPredicted RBP27.99■■■□□ 2.07
TSEN54-207ENST00000580013 MSL1Q68DK7 614 aa27.99■■■□□ 2.07
TSEN54-207ENST00000580013 ANXA1P04083 346 aa27.98■■■□□ 2.07
TSEN54-207ENST00000580013 MYL6BP14649 208 aa27.98■■■□□ 2.07
TSEN54-207ENST00000580013 TM4SF1P30408 202 aa27.98■■■□□ 2.07
TSEN54-207ENST00000580013 DZIP3Q86Y13 1208 aaKnown RBP27.97■■■□□ 2.07
TSEN54-207ENST00000580013 CHPF2Q9P2E5 772 aa27.97■■■□□ 2.07
TSEN54-207ENST00000580013 C4AP0C0L4 1744 aa27.96■■■□□ 2.07
TSEN54-207ENST00000580013 RGL2O15211 777 aa27.96■■■□□ 2.07
TSEN54-207ENST00000580013 DBF4Q9UBU7 674 aaPredicted RBP27.96■■■□□ 2.07
TSEN54-207ENST00000580013 ZNF330Q9Y3S2 320 aaPredicted RBP27.96■■■□□ 2.07
TSEN54-207ENST00000580013 TTLL7Q6ZT98 887 aa27.95■■■□□ 2.06
TSEN54-207ENST00000580013 CHMP4AQ9BY43 222 aa27.94■■■□□ 2.06
TSEN54-207ENST00000580013 CCDC30Q5VVM6 783 aa27.93■■■□□ 2.06
TSEN54-207ENST00000580013 CLEC4GQ6UXB4 293 aa27.93■■■□□ 2.06
TSEN54-207ENST00000580013 LRP5O75197 1615 aa27.92■■■□□ 2.06
TSEN54-207ENST00000580013 ERVV-1B6SEH8 477 aa27.92■■■□□ 2.06
TSEN54-207ENST00000580013 COPS6Q7L5N1 327 aa27.92■■■□□ 2.06
TSEN54-207ENST00000580013 NPM2Q86SE8 214 aaKnown RBP27.92■■■□□ 2.06
TSEN54-207ENST00000580013 MMP10P09238 476 aa27.91■■■□□ 2.06
TSEN54-207ENST00000580013 POLD1P28340 1107 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms