RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 USP16Q9Y5T5 823 aa22.25■■□□□ 1.15
CBX3P2-201ENST00000579647 MYH14Q7Z406 1995 aaKnown RBP22.24■■□□□ 1.15
CBX3P2-201ENST00000579647 UBR3Q6ZT12 1888 aa22.24■■□□□ 1.15
CBX3P2-201ENST00000579647 SNRPA1P09661 255 aaKnown RBP22.24■■□□□ 1.15
CBX3P2-201ENST00000579647 BABAM1Q9NWV8 329 aa22.23■■□□□ 1.15
CBX3P2-201ENST00000579647 CICQ96RK0 1608 aaPredicted RBP22.23■■□□□ 1.15
CBX3P2-201ENST00000579647 CHL1O00533 1208 aa22.23■■□□□ 1.15
CBX3P2-201ENST00000579647 CANXP27824 592 aaKnown RBP22.23■■□□□ 1.15
CBX3P2-201ENST00000579647 ARHGEF1Q92888 912 aaKnown RBP22.23■■□□□ 1.15
CBX3P2-201ENST00000579647 ZBTB1Q9Y2K1 713 aa22.23■■□□□ 1.15
CBX3P2-201ENST00000579647 KDM3BQ7LBC6 1761 aa22.22■■□□□ 1.15
CBX3P2-201ENST00000579647 A1BGP04217 495 aa22.22■■□□□ 1.15
CBX3P2-201ENST00000579647 MSL1Q68DK7 614 aa22.21■■□□□ 1.15
CBX3P2-201ENST00000579647 GIGYF1O75420 1035 aaPredicted RBP22.2■■□□□ 1.14
CBX3P2-201ENST00000579647 CALD1Q05682 793 aaKnown RBP22.2■■□□□ 1.14
CBX3P2-201ENST00000579647 CCDC27Q2M243 656 aa22.2■■□□□ 1.14
CBX3P2-201ENST00000579647 WWC1Q8IX03 1113 aa22.2■■□□□ 1.14
CBX3P2-201ENST00000579647 CFAP44Q96MT7 982 aa22.2■■□□□ 1.14
CBX3P2-201ENST00000579647 ADRA2BP18089 450 aa22.19■■□□□ 1.14
CBX3P2-201ENST00000579647 RFC4P35249 363 aa22.19■■□□□ 1.14
CBX3P2-201ENST00000579647 PTGER2P43116 358 aa22.19■■□□□ 1.14
CBX3P2-201ENST00000579647 SOS1Q07889 1333 aaPredicted RBP22.19■■□□□ 1.14
CBX3P2-201ENST00000579647 PIP4K2AP48426 406 aaPredicted RBP22.18■■□□□ 1.14
CBX3P2-201ENST00000579647 ZNF853P0CG23 659 aa22.17■■□□□ 1.14
CBX3P2-201ENST00000579647 NCBP3Q53F19 620 aaKnown RBP22.17■■□□□ 1.14
CBX3P2-201ENST00000579647 GNAI1P63096 354 aa22.16■■□□□ 1.14
CBX3P2-201ENST00000579647 SGIP1Q9BQI5 828 aa22.16■■□□□ 1.14
CBX3P2-201ENST00000579647 MBIPQ9NS73 344 aa22.16■■□□□ 1.14
CBX3P2-201ENST00000579647 IFT57Q9NWB7 429 aa22.16■■□□□ 1.14
CBX3P2-201ENST00000579647 PPP1R1BQ9UD71 204 aaPredicted RBP22.16■■□□□ 1.14
CBX3P2-201ENST00000579647 ZNF330Q9Y3S2 320 aaPredicted RBP22.16■■□□□ 1.14
CBX3P2-201ENST00000579647 LRP5O75197 1615 aa22.16■■□□□ 1.14
CBX3P2-201ENST00000579647 KRT24Q2M2I5 525 aa22.15■■□□□ 1.14
CBX3P2-201ENST00000579647 SRP68Q9UHB9 627 aaKnown RBP22.15■■□□□ 1.14
CBX3P2-201ENST00000579647 EIF5P55010 431 aaKnown RBP22.14■■□□□ 1.14
CBX3P2-201ENST00000579647 EIF2S2P20042 333 aaKnown RBP22.14■■□□□ 1.13
CBX3P2-201ENST00000579647 POLD1P28340 1107 aa22.14■■□□□ 1.13
CBX3P2-201ENST00000579647 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
CBX3P2-201ENST00000579647 COL15A1P39059 1388 aa22.13■■□□□ 1.13
CBX3P2-201ENST00000579647 NBPF26B4DH59 902 aa22.13■■□□□ 1.13
CBX3P2-201ENST00000579647 NBPF10Q6P3W6 841 aaKnown RBP22.13■■□□□ 1.13
CBX3P2-201ENST00000579647 NBPF15Q8N660 670 aa22.13■■□□□ 1.13
CBX3P2-201ENST00000579647 ARXQ96QS3 562 aa22.13■■□□□ 1.13
CBX3P2-201ENST00000579647 ZPR1O75312 459 aa22.12■■□□□ 1.13
CBX3P2-201ENST00000579647 GYS1P13807 737 aa22.12■■□□□ 1.13
CBX3P2-201ENST00000579647 USPL1Q5W0Q7 1092 aa22.12■■□□□ 1.13
CBX3P2-201ENST00000579647 NPM2Q86SE8 214 aaKnown RBP22.12■■□□□ 1.13
CBX3P2-201ENST00000579647 USP42Q9H9J4 1324 aaKnown RBP22.11■■□□□ 1.13
CBX3P2-201ENST00000579647 NECTIN2Q92692 538 aa22.11■■□□□ 1.13
CBX3P2-201ENST00000579647 TBC1D2BQ9UPU7 963 aa22.11■■□□□ 1.13
CBX3P2-201ENST00000579647 A0A087WZG4 1122 aa22.1■■□□□ 1.13
CBX3P2-201ENST00000579647 WDR63Q8IWG1 891 aa22.1■■□□□ 1.13
CBX3P2-201ENST00000579647 NLGN1Q8N2Q7 840 aa22.1■■□□□ 1.13
CBX3P2-201ENST00000579647 NGEFQ8N5V2 710 aa22.1■■□□□ 1.13
CBX3P2-201ENST00000579647 NARFQ9UHQ1 456 aa22.1■■□□□ 1.13
CBX3P2-201ENST00000579647 TSR2Q969E8 191 aaKnown RBP22.09■■□□□ 1.13
CBX3P2-201ENST00000579647 C4AP0C0L4 1744 aa22.09■■□□□ 1.13
CBX3P2-201ENST00000579647 IL16Q14005 1332 aa22.08■■□□□ 1.13
CBX3P2-201ENST00000579647 ELL2O00472 640 aaPredicted RBP22.08■■□□□ 1.13
CBX3P2-201ENST00000579647 FKBP8Q14318 412 aa22.08■■□□□ 1.13
CBX3P2-201ENST00000579647 MYL6BP14649 208 aa22.07■■□□□ 1.12
CBX3P2-201ENST00000579647 DUSP27Q5VZP5 1158 aa22.07■■□□□ 1.12
CBX3P2-201ENST00000579647 LAMB4A4D0S4 1761 aa22.07■■□□□ 1.12
CBX3P2-201ENST00000579647 COL24A1Q17RW2 1714 aa22.07■■□□□ 1.12
CBX3P2-201ENST00000579647 MMP10P09238 476 aa22.06■■□□□ 1.12
CBX3P2-201ENST00000579647 DZIP3Q86Y13 1208 aaKnown RBP22.06■■□□□ 1.12
CBX3P2-201ENST00000579647 KLHL34Q8N239 644 aa22.06■■□□□ 1.12
CBX3P2-201ENST00000579647 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
CBX3P2-201ENST00000579647 BCL2L12Q9HB09 334 aa22.06■■□□□ 1.12
CBX3P2-201ENST00000579647 SPINK5Q9NQ38 1064 aaPredicted RBP22.06■■□□□ 1.12
CBX3P2-201ENST00000579647 ANXA1P04083 346 aa22.05■■□□□ 1.12
CBX3P2-201ENST00000579647 FHDC1Q9C0D6 1143 aaPredicted RBP22.05■■□□□ 1.12
CBX3P2-201ENST00000579647 HDGFL1Q5TGJ6 251 aa22.04■■□□□ 1.12
CBX3P2-201ENST00000579647 CAMTA2O94983 1202 aa22.03■■□□□ 1.12
CBX3P2-201ENST00000579647 HOXB7P09629 217 aa22.03■■□□□ 1.12
CBX3P2-201ENST00000579647 PDIA6Q15084 440 aa22.03■■□□□ 1.12
CBX3P2-201ENST00000579647 PROSER3Q2NL68 480 aa22.03■■□□□ 1.12
CBX3P2-201ENST00000579647 TSPYL6Q8N831 410 aa22.03■■□□□ 1.12
CBX3P2-201ENST00000579647 ERBB4Q15303 1308 aa22.02■■□□□ 1.12
CBX3P2-201ENST00000579647 ZNF521Q96K83 1311 aa22.02■■□□□ 1.12
CBX3P2-201ENST00000579647 TM4SF1P30408 202 aa22.02■■□□□ 1.12
CBX3P2-201ENST00000579647 BICDL1Q6ZP65 573 aa22.02■■□□□ 1.12
CBX3P2-201ENST00000579647 PARP3Q9Y6F1 533 aa22.02■■□□□ 1.12
CBX3P2-201ENST00000579647 TTLL7Q6ZT98 887 aa22.01■■□□□ 1.11
CBX3P2-201ENST00000579647 SYT17Q9BSW7 474 aa22.01■■□□□ 1.11
CBX3P2-201ENST00000579647 FANCIQ9NVI1 1328 aa22.01■■□□□ 1.11
CBX3P2-201ENST00000579647 DDR1Q08345 913 aa22■■□□□ 1.11
CBX3P2-201ENST00000579647 GOLGA2Q08379 1002 aa22■■□□□ 1.11
CBX3P2-201ENST00000579647 NFIXQ14938 502 aa22■■□□□ 1.11
CBX3P2-201ENST00000579647 CHPF2Q9P2E5 772 aa22■■□□□ 1.11
CBX3P2-201ENST00000579647 TBC1D9BQ66K14 1250 aa21.99■■□□□ 1.11
CBX3P2-201ENST00000579647 DDX21Q9NR30 783 aaKnown RBP eCLIP21.99■■□□□ 1.11
CBX3P2-201ENST00000579647 EXOSC9Q06265 439 aaKnown RBP21.98■■□□□ 1.11
CBX3P2-201ENST00000579647 LRP10Q7Z4F1 713 aa21.98■■□□□ 1.11
CBX3P2-201ENST00000579647 AIMP1Q12904 312 aaKnown RBP21.97■■□□□ 1.11
CBX3P2-201ENST00000579647 TWISTNBQ3B726 338 aaPredicted RBP21.97■■□□□ 1.11
CBX3P2-201ENST00000579647 MYH16Q9H6N6 1097 aa21.97■■□□□ 1.11
CBX3P2-201ENST00000579647 SRCAPQ6ZRS2 3230 aa21.97■■□□□ 1.11
CBX3P2-201ENST00000579647 POLRMTO00411 1230 aaKnown RBP21.97■■□□□ 1.11
CBX3P2-201ENST00000579647 HLFQ16534 295 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 317.9 ms