RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 C4BP0C0L5 1744 aa27.29■■□□□ 1.96
SCO1-204ENST00000579396 SLC16A10Q8TF71 515 aa27.28■■□□□ 1.96
SCO1-204ENST00000579396 PNPLA7Q6ZV29 1317 aa27.27■■□□□ 1.96
SCO1-204ENST00000579396 ZNF521Q96K83 1311 aa27.27■■□□□ 1.96
SCO1-204ENST00000579396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.27■■□□□ 1.96
SCO1-204ENST00000579396 PRAMEF22A3QJZ6 481 aa27.27■■□□□ 1.96
SCO1-204ENST00000579396 KDM3BQ7LBC6 1761 aa27.27■■□□□ 1.96
SCO1-204ENST00000579396 MSH5O43196 834 aa27.26■■□□□ 1.95
SCO1-204ENST00000579396 HOXB7P09629 217 aa27.26■■□□□ 1.95
SCO1-204ENST00000579396 COL23A1Q86Y22 540 aaPredicted RBP27.26■■□□□ 1.95
SCO1-204ENST00000579396 CHMP4AQ9BY43 222 aa27.26■■□□□ 1.95
SCO1-204ENST00000579396 MYH16Q9H6N6 1097 aa27.26■■□□□ 1.95
SCO1-204ENST00000579396 CICQ96RK0 1608 aaPredicted RBP27.26■■□□□ 1.95
SCO1-204ENST00000579396 PHF14O94880 888 aa27.25■■□□□ 1.95
SCO1-204ENST00000579396 A1BGP04217 495 aa27.25■■□□□ 1.95
SCO1-204ENST00000579396 CANXP27824 592 aaKnown RBP27.25■■□□□ 1.95
SCO1-204ENST00000579396 GOLGA2Q08379 1002 aa27.25■■□□□ 1.95
SCO1-204ENST00000579396 NPM2Q86SE8 214 aaKnown RBP27.25■■□□□ 1.95
SCO1-204ENST00000579396 ZBTB1Q9Y2K1 713 aa27.24■■□□□ 1.95
SCO1-204ENST00000579396 TJP1Q07157 1748 aa27.24■■□□□ 1.95
SCO1-204ENST00000579396 IL6STP40189 918 aaPredicted RBP27.23■■□□□ 1.95
SCO1-204ENST00000579396 ARHGEF1Q92888 912 aaKnown RBP27.23■■□□□ 1.95
SCO1-204ENST00000579396 SOS1Q07889 1333 aaPredicted RBP27.22■■□□□ 1.95
SCO1-204ENST00000579396 A0A087WZG4 1122 aa27.22■■□□□ 1.95
SCO1-204ENST00000579396 RFC4P35249 363 aa27.22■■□□□ 1.95
SCO1-204ENST00000579396 DUSP27Q5VZP5 1158 aa27.22■■□□□ 1.95
SCO1-204ENST00000579396 TSR2Q969E8 191 aaKnown RBP27.22■■□□□ 1.95
SCO1-204ENST00000579396 COL5A3P25940 1745 aaPredicted RBP27.21■■□□□ 1.95
SCO1-204ENST00000579396 EIF2S2P20042 333 aaKnown RBP27.21■■□□□ 1.95
SCO1-204ENST00000579396 EIF5P55010 431 aaKnown RBP27.21■■□□□ 1.95
SCO1-204ENST00000579396 HNRNPUQ00839 825 aaKnown RBP eCLIP27.21■■□□□ 1.95
SCO1-204ENST00000579396 AMIGO3Q86WK7 504 aa27.21■■□□□ 1.95
SCO1-204ENST00000579396 PDGFDQ9GZP0 370 aaPredicted RBP27.21■■□□□ 1.95
SCO1-204ENST00000579396 ERBB4Q15303 1308 aa27.2■■□□□ 1.95
SCO1-204ENST00000579396 E9PSI1 815 aa27.2■■□□□ 1.94
SCO1-204ENST00000579396 KRT24Q2M2I5 525 aa27.2■■□□□ 1.94
SCO1-204ENST00000579396 SMIM5Q71RC9 77 aa27.19■■□□□ 1.94
SCO1-204ENST00000579396 MTFR1LQ9H019 292 aa27.19■■□□□ 1.94
SCO1-204ENST00000579396 C8orf58Q8NAV2 365 aa27.18■■□□□ 1.94
SCO1-204ENST00000579396 SPINK5Q9NQ38 1064 aaPredicted RBP27.18■■□□□ 1.94
SCO1-204ENST00000579396 MYH14Q7Z406 1995 aaKnown RBP27.18■■□□□ 1.94
SCO1-204ENST00000579396 FANCIQ9NVI1 1328 aa27.17■■□□□ 1.94
SCO1-204ENST00000579396 ELL2O00472 640 aaPredicted RBP27.17■■□□□ 1.94
SCO1-204ENST00000579396 SPON1Q9HCB6 807 aa27.17■■□□□ 1.94
SCO1-204ENST00000579396 QSER1Q2KHR3 1735 aa27.16■■□□□ 1.94
SCO1-204ENST00000579396 NBPF26B4DH59 902 aa27.16■■□□□ 1.94
SCO1-204ENST00000579396 ZPR1O75312 459 aa27.16■■□□□ 1.94
SCO1-204ENST00000579396 ZBTB7AO95365 584 aa27.16■■□□□ 1.94
SCO1-204ENST00000579396 SLFN5Q08AF3 891 aa27.16■■□□□ 1.94
SCO1-204ENST00000579396 NBPF10Q6P3W6 841 aaKnown RBP27.16■■□□□ 1.94
SCO1-204ENST00000579396 NBPF15Q8N660 670 aa27.16■■□□□ 1.94
SCO1-204ENST00000579396 HDGFL1Q5TGJ6 251 aa27.15■■□□□ 1.94
SCO1-204ENST00000579396 ZNF330Q9Y3S2 320 aaPredicted RBP27.15■■□□□ 1.94
SCO1-204ENST00000579396 UBR3Q6ZT12 1888 aa27.15■■□□□ 1.94
SCO1-204ENST00000579396 NARFQ9UHQ1 456 aa27.14■■□□□ 1.94
SCO1-204ENST00000579396 ATF5Q9Y2D1 282 aaPredicted RBP27.14■■□□□ 1.94
SCO1-204ENST00000579396 COL15A1P39059 1388 aa27.13■■□□□ 1.93
SCO1-204ENST00000579396 TWISTNBQ3B726 338 aaPredicted RBP27.13■■□□□ 1.93
SCO1-204ENST00000579396 NLGN1Q8N2Q7 840 aa27.13■■□□□ 1.93
SCO1-204ENST00000579396 ARXQ96QS3 562 aa27.13■■□□□ 1.93
SCO1-204ENST00000579396 PIP4K2AP48426 406 aaPredicted RBP27.12■■□□□ 1.93
SCO1-204ENST00000579396 EXOSC9Q06265 439 aaKnown RBP27.12■■□□□ 1.93
SCO1-204ENST00000579396 CCDC30Q5VVM6 783 aa27.12■■□□□ 1.93
SCO1-204ENST00000579396 TSPYL6Q8N831 410 aa27.12■■□□□ 1.93
SCO1-204ENST00000579396 NECTIN2Q92692 538 aa27.12■■□□□ 1.93
SCO1-204ENST00000579396 DDX21Q9NR30 783 aaKnown RBP eCLIP27.12■■□□□ 1.93
SCO1-204ENST00000579396 DBF4Q9UBU7 674 aaPredicted RBP27.12■■□□□ 1.93
SCO1-204ENST00000579396 MYL6BP14649 208 aa27.11■■□□□ 1.93
SCO1-204ENST00000579396 PDIA6Q15084 440 aa27.1■■□□□ 1.93
SCO1-204ENST00000579396 DZIP3Q86Y13 1208 aaKnown RBP27.1■■□□□ 1.93
SCO1-204ENST00000579396 TRMT2AQ8IZ69 625 aaKnown RBP27.1■■□□□ 1.93
SCO1-204ENST00000579396 CDCA7LQ96GN5 454 aa27.1■■□□□ 1.93
SCO1-204ENST00000579396 USP42Q9H9J4 1324 aaKnown RBP27.1■■□□□ 1.93
SCO1-204ENST00000579396 POLD1P28340 1107 aa27.09■■□□□ 1.93
SCO1-204ENST00000579396 TBC1D2BQ9UPU7 963 aa27.09■■□□□ 1.93
SCO1-204ENST00000579396 CASZ1Q86V15 1759 aa27.09■■□□□ 1.93
SCO1-204ENST00000579396 TUBGCP6Q96RT7 1819 aa27.09■■□□□ 1.93
SCO1-204ENST00000579396 VAMP4O75379 141 aa27.08■■□□□ 1.93
SCO1-204ENST00000579396 GYS1P13807 737 aa27.08■■□□□ 1.93
SCO1-204ENST00000579396 USPL1Q5W0Q7 1092 aa27.08■■□□□ 1.93
SCO1-204ENST00000579396 HYPKQ9NX55 129 aa27.08■■□□□ 1.93
SCO1-204ENST00000579396 SRP68Q9UHB9 627 aaKnown RBP27.08■■□□□ 1.93
SCO1-204ENST00000579396 RGL2O15211 777 aa27.06■■□□□ 1.92
SCO1-204ENST00000579396 CHPF2Q9P2E5 772 aa27.06■■□□□ 1.92
SCO1-204ENST00000579396 ZBED9Q6R2W3 1325 aa27.06■■□□□ 1.92
SCO1-204ENST00000579396 LAMB4A4D0S4 1761 aa27.06■■□□□ 1.92
SCO1-204ENST00000579396 MSL1Q68DK7 614 aa27.05■■□□□ 1.92
SCO1-204ENST00000579396 CLEC4GQ6UXB4 293 aa27.05■■□□□ 1.92
SCO1-204ENST00000579396 STK31Q9BXU1 1019 aa27.05■■□□□ 1.92
SCO1-204ENST00000579396 ERVV-1B6SEH8 477 aa27.04■■□□□ 1.92
SCO1-204ENST00000579396 KIF6Q6ZMV9 814 aa27.04■■□□□ 1.92
SCO1-204ENST00000579396 LRP10Q7Z4F1 713 aa27.04■■□□□ 1.92
SCO1-204ENST00000579396 CAMTA2O94983 1202 aa27.03■■□□□ 1.92
SCO1-204ENST00000579396 PTGER2P43116 358 aa27.03■■□□□ 1.92
SCO1-204ENST00000579396 FKBP8Q14318 412 aa27.03■■□□□ 1.92
SCO1-204ENST00000579396 PROSER3Q2NL68 480 aa27.03■■□□□ 1.92
SCO1-204ENST00000579396 COPS6Q7L5N1 327 aa27.03■■□□□ 1.92
SCO1-204ENST00000579396 ZNF652Q9Y2D9 606 aa27.03■■□□□ 1.92
SCO1-204ENST00000579396 ANXA1P04083 346 aa27.02■■□□□ 1.92
SCO1-204ENST00000579396 SGIP1Q9BQI5 828 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms