RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	30.98	■■■□□ 2.55
ERBB2-209	ENST00000578709	IFT57	Q9NWB7	429 aa		30.98	■■■□□ 2.55
ERBB2-209	ENST00000578709	RTCB	Q9Y3I0	505 aa	Known RBP	30.98	■■■□□ 2.55
ERBB2-209	ENST00000578709	GIGYF1	O75420	1035 aa	Predicted RBP	30.96	■■■□□ 2.55
ERBB2-209	ENST00000578709	ADRA2B	P18089	450 aa		30.96	■■■□□ 2.55
ERBB2-209	ENST00000578709	SLC16A10	Q8TF71	515 aa		30.96	■■■□□ 2.55
ERBB2-209	ENST00000578709	LAS1L	Q9Y4W2	734 aa	Known RBP	30.96	■■■□□ 2.55
ERBB2-209	ENST00000578709	PRAMEF22	A3QJZ6	481 aa		30.95	■■■□□ 2.55
ERBB2-209	ENST00000578709	PHF14	O94880	888 aa		30.95	■■■□□ 2.55
ERBB2-209	ENST00000578709	GNAI1	P63096	354 aa		30.95	■■■□□ 2.55
ERBB2-209	ENST00000578709	SMIM5	Q71RC9	77 aa		30.95	■■■□□ 2.55
ERBB2-209	ENST00000578709	USP16	Q9Y5T5	823 aa		30.95	■■■□□ 2.55
ERBB2-209	ENST00000578709	SRCAP	Q6ZRS2	3230 aa		30.93	■■■□□ 2.54
ERBB2-209	ENST00000578709	LAMB4	A4D0S4	1761 aa		30.93	■■■□□ 2.54
ERBB2-209	ENST00000578709	MBIP	Q9NS73	344 aa		30.93	■■■□□ 2.54
ERBB2-209	ENST00000578709	ZBTB1	Q9Y2K1	713 aa		30.93	■■■□□ 2.54
ERBB2-209	ENST00000578709	IL16	Q14005	1332 aa		30.93	■■■□□ 2.54
ERBB2-209	ENST00000578709	ZBTB7A	O95365	584 aa		30.92	■■■□□ 2.54
ERBB2-209	ENST00000578709	TRAPPC3L	Q5T215	181 aa		30.92	■■■□□ 2.54
ERBB2-209	ENST00000578709	MTFR1L	Q9H019	292 aa		30.92	■■■□□ 2.54
ERBB2-209	ENST00000578709	SALL2	Q9Y467	1007 aa	Predicted RBP	30.92	■■■□□ 2.54
ERBB2-209	ENST00000578709	SOS1	Q07889	1333 aa	Predicted RBP	30.92	■■■□□ 2.54
ERBB2-209	ENST00000578709	LRP5	O75197	1615 aa		30.91	■■■□□ 2.54
ERBB2-209	ENST00000578709	WDR63	Q8IWG1	891 aa		30.91	■■■□□ 2.54
ERBB2-209	ENST00000578709	MSH5	O43196	834 aa		30.9	■■■□□ 2.54
ERBB2-209	ENST00000578709	SPON1	Q9HCB6	807 aa		30.9	■■■□□ 2.54
ERBB2-209	ENST00000578709	ARHGEF1	Q92888	912 aa	Known RBP	30.89	■■■□□ 2.54
ERBB2-209	ENST00000578709	COL24A1	Q17RW2	1714 aa		30.88	■■■□□ 2.53
ERBB2-209	ENST00000578709	A1BG	P04217	495 aa		30.88	■■■□□ 2.53
ERBB2-209	ENST00000578709	C4A	P0C0L4	1744 aa		30.87	■■■□□ 2.53
ERBB2-209	ENST00000578709	CANX	P27824	592 aa	Known RBP	30.87	■■■□□ 2.53
ERBB2-209	ENST00000578709	EIF5	P55010	431 aa	Known RBP	30.87	■■■□□ 2.53
ERBB2-209	ENST00000578709	ATF5	Q9Y2D1	282 aa	Predicted RBP	30.86	■■■□□ 2.53
ERBB2-209	ENST00000578709	ZNF521	Q96K83	1311 aa		30.86	■■■□□ 2.53
ERBB2-209	ENST00000578709	COL15A1	P39059	1388 aa		30.85	■■■□□ 2.53
ERBB2-209	ENST00000578709	IL6ST	P40189	918 aa	Predicted RBP	30.85	■■■□□ 2.53
ERBB2-209	ENST00000578709	RFC4	P35249	363 aa		30.84	■■■□□ 2.53
ERBB2-209	ENST00000578709	KRT24	Q2M2I5	525 aa		30.84	■■■□□ 2.53
ERBB2-209	ENST00000578709	SGIP1	Q9BQI5	828 aa		30.84	■■■□□ 2.53
ERBB2-209	ENST00000578709	HOXB7	P09629	217 aa		30.83	■■■□□ 2.53
ERBB2-209	ENST00000578709	PTGER2	P43116	358 aa		30.83	■■■□□ 2.53
ERBB2-209	ENST00000578709	NBPF26	B4DH59	902 aa		30.82	■■■□□ 2.52
ERBB2-209	ENST00000578709	NBPF10	Q6P3W6	841 aa	Known RBP	30.82	■■■□□ 2.52
ERBB2-209	ENST00000578709	NBPF15	Q8N660	670 aa		30.82	■■■□□ 2.52
ERBB2-209	ENST00000578709	ERBB4	Q15303	1308 aa		30.8	■■■□□ 2.52
ERBB2-209	ENST00000578709	USP42	Q9H9J4	1324 aa	Known RBP	30.8	■■■□□ 2.52
ERBB2-209	ENST00000578709		A0A087WZG4	1122 aa		30.8	■■■□□ 2.52
ERBB2-209	ENST00000578709	TSR2	Q969E8	191 aa	Known RBP	30.8	■■■□□ 2.52
ERBB2-209	ENST00000578709	PIP4K2A	P48426	406 aa	Predicted RBP	30.79	■■■□□ 2.52
ERBB2-209	ENST00000578709	DUSP27	Q5VZP5	1158 aa		30.78	■■■□□ 2.52
ERBB2-209	ENST00000578709	MSL1	Q68DK7	614 aa		30.78	■■■□□ 2.52
ERBB2-209	ENST00000578709	NARF	Q9UHQ1	456 aa		30.78	■■■□□ 2.52
ERBB2-209	ENST00000578709	GYS1	P13807	737 aa		30.77	■■■□□ 2.52
ERBB2-209	ENST00000578709	SRP68	Q9UHB9	627 aa	Known RBP	30.77	■■■□□ 2.52
ERBB2-209	ENST00000578709	FANCI	Q9NVI1	1328 aa		30.76	■■■□□ 2.52
ERBB2-209	ENST00000578709	EIF2S2	P20042	333 aa	Known RBP	30.76	■■■□□ 2.51
ERBB2-209	ENST00000578709	SPINK5	Q9NQ38	1064 aa	Predicted RBP	30.76	■■■□□ 2.51
ERBB2-209	ENST00000578709	ZPR1	O75312	459 aa		30.75	■■■□□ 2.51
ERBB2-209	ENST00000578709	C8orf58	Q8NAV2	365 aa		30.75	■■■□□ 2.51
ERBB2-209	ENST00000578709	ZNF330	Q9Y3S2	320 aa	Predicted RBP	30.75	■■■□□ 2.51
ERBB2-209	ENST00000578709	POLD1	P28340	1107 aa		30.74	■■■□□ 2.51
ERBB2-209	ENST00000578709	NPM2	Q86SE8	214 aa	Known RBP	30.74	■■■□□ 2.51
ERBB2-209	ENST00000578709	NLGN1	Q8N2Q7	840 aa		30.74	■■■□□ 2.51
ERBB2-209	ENST00000578709	PDIA6	Q15084	440 aa		30.73	■■■□□ 2.51
ERBB2-209	ENST00000578709	USPL1	Q5W0Q7	1092 aa		30.73	■■■□□ 2.51
ERBB2-209	ENST00000578709	MYH16	Q9H6N6	1097 aa		30.73	■■■□□ 2.51
ERBB2-209	ENST00000578709	HDGFL1	Q5TGJ6	251 aa		30.72	■■■□□ 2.51
ERBB2-209	ENST00000578709	GOLGA2	Q08379	1002 aa		30.71	■■■□□ 2.51
ERBB2-209	ENST00000578709	TBC1D2B	Q9UPU7	963 aa		30.71	■■■□□ 2.51
ERBB2-209	ENST00000578709	SCN7A	Q01118	1682 aa		30.71	■■■□□ 2.51
ERBB2-209	ENST00000578709	FKBP8	Q14318	412 aa		30.7	■■■□□ 2.51
ERBB2-209	ENST00000578709	LRP10	Q7Z4F1	713 aa		30.7	■■■□□ 2.51
ERBB2-209	ENST00000578709	DZIP3	Q86Y13	1208 aa	Known RBP	30.7	■■■□□ 2.51
ERBB2-209	ENST00000578709	TSPYL6	Q8N831	410 aa		30.7	■■■□□ 2.51
ERBB2-209	ENST00000578709	BCL2L12	Q9HB09	334 aa		30.7	■■■□□ 2.51
ERBB2-209	ENST00000578709	ELL2	O00472	640 aa	Predicted RBP	30.69	■■■□□ 2.5
ERBB2-209	ENST00000578709	CAMTA2	O94983	1202 aa		30.69	■■■□□ 2.5
ERBB2-209	ENST00000578709	NECTIN2	Q92692	538 aa		30.69	■■■□□ 2.5
ERBB2-209	ENST00000578709	ARX	Q96QS3	562 aa		30.69	■■■□□ 2.5
ERBB2-209	ENST00000578709	MYL6B	P14649	208 aa		30.68	■■■□□ 2.5
ERBB2-209	ENST00000578709	PROSER3	Q2NL68	480 aa		30.68	■■■□□ 2.5
ERBB2-209	ENST00000578709	DDX21	Q9NR30	783 aa	Known RBP eCLIP	30.68	■■■□□ 2.5
ERBB2-209	ENST00000578709	BCOR	Q6W2J9	1755 aa		30.68	■■■□□ 2.5
ERBB2-209	ENST00000578709	CHMP4A	Q9BY43	222 aa		30.67	■■■□□ 2.5
ERBB2-209	ENST00000578709	PPP1R1B	Q9UD71	204 aa	Predicted RBP	30.67	■■■□□ 2.5
ERBB2-209	ENST00000578709		E9PSI1	815 aa		30.66	■■■□□ 2.5
ERBB2-209	ENST00000578709	RGL2	O15211	777 aa		30.66	■■■□□ 2.5
ERBB2-209	ENST00000578709	MMP10	P09238	476 aa		30.66	■■■□□ 2.5
ERBB2-209	ENST00000578709	CHPF2	Q9P2E5	772 aa		30.66	■■■□□ 2.5
ERBB2-209	ENST00000578709	TWISTNB	Q3B726	338 aa	Predicted RBP	30.65	■■■□□ 2.5
ERBB2-209	ENST00000578709	DBF4	Q9UBU7	674 aa	Predicted RBP	30.65	■■■□□ 2.5
ERBB2-209	ENST00000578709	ANXA1	P04083	346 aa		30.64	■■■□□ 2.5
ERBB2-209	ENST00000578709	TM4SF1	P30408	202 aa		30.64	■■■□□ 2.5
ERBB2-209	ENST00000578709	EXOSC9	Q06265	439 aa	Known RBP	30.64	■■■□□ 2.5
ERBB2-209	ENST00000578709	SLFN5	Q08AF3	891 aa		30.64	■■■□□ 2.5
ERBB2-209	ENST00000578709	HNRNPU	Q00839	825 aa	Known RBP eCLIP	30.62	■■■□□ 2.49
ERBB2-209	ENST00000578709	CLEC4G	Q6UXB4	293 aa		30.62	■■■□□ 2.49
ERBB2-209	ENST00000578709	TTLL7	Q6ZT98	887 aa		30.62	■■■□□ 2.49
ERBB2-209	ENST00000578709	CCDC30	Q5VVM6	783 aa		30.61	■■■□□ 2.49
ERBB2-209	ENST00000578709	ERVV-1	B6SEH8	477 aa		30.6	■■■□□ 2.49

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms