RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 USP16Q9Y5T5 823 aa28.42■■■□□ 2.14
CDC42EP4-203ENST00000578516 RC3H1Q5TC82 1133 aaKnown RBP28.4■■■□□ 2.14
CDC42EP4-203ENST00000578516 A1BGP04217 495 aa28.39■■■□□ 2.14
CDC42EP4-203ENST00000578516 CANXP27824 592 aaKnown RBP28.39■■■□□ 2.14
CDC42EP4-203ENST00000578516 WWC1Q8IX03 1113 aa28.39■■■□□ 2.14
CDC42EP4-203ENST00000578516 RTCBQ9Y3I0 505 aaKnown RBP28.39■■■□□ 2.14
CDC42EP4-203ENST00000578516 CHL1O00533 1208 aa28.38■■■□□ 2.13
CDC42EP4-203ENST00000578516 RPS6KA4O75676 772 aa28.38■■■□□ 2.13
CDC42EP4-203ENST00000578516 SSFA2P28290 1259 aa28.38■■■□□ 2.13
CDC42EP4-203ENST00000578516 SOS1Q07889 1333 aaPredicted RBP28.38■■■□□ 2.13
CDC42EP4-203ENST00000578516 SNRPA1P09661 255 aaKnown RBP28.37■■■□□ 2.13
CDC42EP4-203ENST00000578516 MBIPQ9NS73 344 aa28.37■■■□□ 2.13
CDC42EP4-203ENST00000578516 SRP68Q9UHB9 627 aaKnown RBP28.36■■■□□ 2.13
CDC42EP4-203ENST00000578516 GIGYF1O75420 1035 aaPredicted RBP28.35■■■□□ 2.13
CDC42EP4-203ENST00000578516 ZNF853P0CG23 659 aa28.35■■■□□ 2.13
CDC42EP4-203ENST00000578516 ARHGEF1Q92888 912 aaKnown RBP28.35■■■□□ 2.13
CDC42EP4-203ENST00000578516 SCN7AQ01118 1682 aa28.35■■■□□ 2.13
CDC42EP4-203ENST00000578516 PTGER2P43116 358 aa28.34■■■□□ 2.13
CDC42EP4-203ENST00000578516 CCDC27Q2M243 656 aa28.34■■■□□ 2.13
CDC42EP4-203ENST00000578516 MTFR1LQ9H019 292 aa28.34■■■□□ 2.13
CDC42EP4-203ENST00000578516 ZNF330Q9Y3S2 320 aaPredicted RBP28.34■■■□□ 2.13
CDC42EP4-203ENST00000578516 COL15A1P39059 1388 aa28.34■■■□□ 2.13
CDC42EP4-203ENST00000578516 BCORQ6W2J9 1755 aa28.33■■■□□ 2.13
CDC42EP4-203ENST00000578516 STARD3NLO95772 234 aa28.33■■■□□ 2.13
CDC42EP4-203ENST00000578516 TSR2Q969E8 191 aaKnown RBP28.33■■■□□ 2.13
CDC42EP4-203ENST00000578516 CFAP44Q96MT7 982 aa28.33■■■□□ 2.13
CDC42EP4-203ENST00000578516 SPON1Q9HCB6 807 aa28.33■■■□□ 2.13
CDC42EP4-203ENST00000578516 IFT57Q9NWB7 429 aa28.32■■■□□ 2.12
CDC42EP4-203ENST00000578516 NBPF26B4DH59 902 aa28.31■■■□□ 2.12
CDC42EP4-203ENST00000578516 TRAPPC3LQ5T215 181 aa28.31■■■□□ 2.12
CDC42EP4-203ENST00000578516 NBPF10Q6P3W6 841 aaKnown RBP28.31■■■□□ 2.12
CDC42EP4-203ENST00000578516 NBPF15Q8N660 670 aa28.31■■■□□ 2.12
CDC42EP4-203ENST00000578516 SGIP1Q9BQI5 828 aa28.31■■■□□ 2.12
CDC42EP4-203ENST00000578516 FLAD1Q8NFF5 587 aa28.3■■■□□ 2.12
CDC42EP4-203ENST00000578516 NECTIN2Q92692 538 aa28.3■■■□□ 2.12
CDC42EP4-203ENST00000578516 TEX13AQ9BXU3 409 aaPredicted RBP28.3■■■□□ 2.12
CDC42EP4-203ENST00000578516 SPINK5Q9NQ38 1064 aaPredicted RBP28.3■■■□□ 2.12
CDC42EP4-203ENST00000578516 BABAM1Q9NWV8 329 aa28.3■■■□□ 2.12
CDC42EP4-203ENST00000578516 HMGB2P26583 209 aaKnown RBP28.28■■■□□ 2.12
CDC42EP4-203ENST00000578516 GNAI1P63096 354 aa28.28■■■□□ 2.12
CDC42EP4-203ENST00000578516 EIF5P55010 431 aaKnown RBP28.27■■■□□ 2.12
CDC42EP4-203ENST00000578516 SLC16A10Q8TF71 515 aa28.27■■■□□ 2.12
CDC42EP4-203ENST00000578516 USP42Q9H9J4 1324 aaKnown RBP28.26■■■□□ 2.11
CDC42EP4-203ENST00000578516 ANXA1P04083 346 aa28.26■■■□□ 2.11
CDC42EP4-203ENST00000578516 ADRA2BP18089 450 aa28.26■■■□□ 2.11
CDC42EP4-203ENST00000578516 EIF2S2P20042 333 aaKnown RBP28.26■■■□□ 2.11
CDC42EP4-203ENST00000578516 RFC4P35249 363 aa28.26■■■□□ 2.11
CDC42EP4-203ENST00000578516 CALD1Q05682 793 aaKnown RBP28.26■■■□□ 2.11
CDC42EP4-203ENST00000578516 GYS1P13807 737 aa28.25■■■□□ 2.11
CDC42EP4-203ENST00000578516 ZNF521Q96K83 1311 aa28.24■■■□□ 2.11
CDC42EP4-203ENST00000578516 ELL2O00472 640 aaPredicted RBP28.24■■■□□ 2.11
CDC42EP4-203ENST00000578516 PROSER3Q2NL68 480 aa28.23■■■□□ 2.11
CDC42EP4-203ENST00000578516 USPL1Q5W0Q7 1092 aa28.23■■■□□ 2.11
CDC42EP4-203ENST00000578516 C8orf58Q8NAV2 365 aa28.23■■■□□ 2.11
CDC42EP4-203ENST00000578516 TBC1D2BQ9UPU7 963 aa28.23■■■□□ 2.11
CDC42EP4-203ENST00000578516 FANCIQ9NVI1 1328 aa28.22■■■□□ 2.11
CDC42EP4-203ENST00000578516 MYL6BP14649 208 aa28.22■■■□□ 2.11
CDC42EP4-203ENST00000578516 IL6STP40189 918 aaPredicted RBP28.22■■■□□ 2.11
CDC42EP4-203ENST00000578516 FKBP8Q14318 412 aa28.22■■■□□ 2.11
CDC42EP4-203ENST00000578516 NCBP3Q53F19 620 aaKnown RBP28.22■■■□□ 2.11
CDC42EP4-203ENST00000578516 DUSP27Q5VZP5 1158 aa28.22■■■□□ 2.11
CDC42EP4-203ENST00000578516 NGEFQ8N5V2 710 aa28.22■■■□□ 2.11
CDC42EP4-203ENST00000578516 TSPYL6Q8N831 410 aa28.22■■■□□ 2.11
CDC42EP4-203ENST00000578516 BCL2L12Q9HB09 334 aa28.22■■■□□ 2.11
CDC42EP4-203ENST00000578516 SRCAPQ6ZRS2 3230 aa28.21■■■□□ 2.11
CDC42EP4-203ENST00000578516 AFDNP55196 1824 aaKnown RBP28.21■■■□□ 2.11
CDC42EP4-203ENST00000578516 ARXQ96QS3 562 aa28.21■■■□□ 2.11
CDC42EP4-203ENST00000578516 IL16Q14005 1332 aa28.2■■■□□ 2.11
CDC42EP4-203ENST00000578516 WDR63Q8IWG1 891 aa28.2■■■□□ 2.1
CDC42EP4-203ENST00000578516 PPP1R1BQ9UD71 204 aaPredicted RBP28.19■■■□□ 2.1
CDC42EP4-203ENST00000578516 NARFQ9UHQ1 456 aa28.19■■■□□ 2.1
CDC42EP4-203ENST00000578516 NUP98P52948 1817 aa28.19■■■□□ 2.1
CDC42EP4-203ENST00000578516 PDIA6Q15084 440 aa28.18■■■□□ 2.1
CDC42EP4-203ENST00000578516 MMP10P09238 476 aa28.17■■■□□ 2.1
CDC42EP4-203ENST00000578516 KLHL34Q8N239 644 aa28.17■■■□□ 2.1
CDC42EP4-203ENST00000578516 ZPR1O75312 459 aa28.16■■■□□ 2.1
CDC42EP4-203ENST00000578516 POLD1P28340 1107 aa28.16■■■□□ 2.1
CDC42EP4-203ENST00000578516 HDGFL1Q5TGJ6 251 aa28.16■■■□□ 2.1
CDC42EP4-203ENST00000578516 TTLL7Q6ZT98 887 aa28.16■■■□□ 2.1
CDC42EP4-203ENST00000578516 LRP10Q7Z4F1 713 aa28.16■■■□□ 2.1
CDC42EP4-203ENST00000578516 DZIP3Q86Y13 1208 aaKnown RBP28.16■■■□□ 2.1
CDC42EP4-203ENST00000578516 CHPF2Q9P2E5 772 aa28.16■■■□□ 2.1
CDC42EP4-203ENST00000578516 CAMTA2O94983 1202 aa28.15■■■□□ 2.1
CDC42EP4-203ENST00000578516 DDR1Q08345 913 aa28.15■■■□□ 2.1
CDC42EP4-203ENST00000578516 TCERG1O14776 1098 aaKnown RBP28.14■■■□□ 2.1
CDC42EP4-203ENST00000578516 CDCA7LQ96GN5 454 aa28.14■■■□□ 2.1
CDC42EP4-203ENST00000578516 A0A087WZG4 1122 aa28.12■■■□□ 2.09
CDC42EP4-203ENST00000578516 EXOSC9Q06265 439 aaKnown RBP28.12■■■□□ 2.09
CDC42EP4-203ENST00000578516 BICDL1Q6ZP65 573 aa28.12■■■□□ 2.09
CDC42EP4-203ENST00000578516 FHDC1Q9C0D6 1143 aaPredicted RBP28.12■■■□□ 2.09
CDC42EP4-203ENST00000578516 KIAA1551Q9HCM1 1747 aa28.12■■■□□ 2.09
CDC42EP4-203ENST00000578516 NRXN2Q9P2S2 1712 aa28.12■■■□□ 2.09
CDC42EP4-203ENST00000578516 KIF13BQ9NQT8 1826 aa28.11■■■□□ 2.09
CDC42EP4-203ENST00000578516 TBC1D9BQ66K14 1250 aa28.11■■■□□ 2.09
CDC42EP4-203ENST00000578516 ERBB4Q15303 1308 aa28.11■■■□□ 2.09
CDC42EP4-203ENST00000578516 ANKRD36CQ5JPF3 1778 aa28.11■■■□□ 2.09
CDC42EP4-203ENST00000578516 HOXB7P09629 217 aa28.1■■■□□ 2.09
CDC42EP4-203ENST00000578516 NFIXQ14938 502 aa28.1■■■□□ 2.09
CDC42EP4-203ENST00000578516 NLGN1Q8N2Q7 840 aa28.1■■■□□ 2.09
CDC42EP4-203ENST00000578516 N4BP2Q86UW6 1770 aaPredicted RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms