RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 ZBTB7AO95365 584 aa16.59■□□□□ 0.25
CDK5RAP3-203ENST00000577442 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-203ENST00000577442 EIF4A1P60842 406 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-203ENST00000577442 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.24
CDK5RAP3-203ENST00000577442 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
CDK5RAP3-203ENST00000577442 SOS1Q07889 1333 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-203ENST00000577442 CHL1O00533 1208 aa16.57■□□□□ 0.24
CDK5RAP3-203ENST00000577442 GNAI1P63096 354 aa16.57■□□□□ 0.24
CDK5RAP3-203ENST00000577442 INTS5Q6P9B9 1019 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-203ENST00000577442 IFT57Q9NWB7 429 aa16.57■□□□□ 0.24
CDK5RAP3-203ENST00000577442 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
CDK5RAP3-203ENST00000577442 LAS1LQ9Y4W2 734 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-203ENST00000577442 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
CDK5RAP3-203ENST00000577442 POLD1P28340 1107 aa16.56■□□□□ 0.24
CDK5RAP3-203ENST00000577442 RFC4P35249 363 aa16.56■□□□□ 0.24
CDK5RAP3-203ENST00000577442 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-203ENST00000577442 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
CDK5RAP3-203ENST00000577442 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-203ENST00000577442 COL24A1Q17RW2 1714 aa16.56■□□□□ 0.24
CDK5RAP3-203ENST00000577442 COL15A1P39059 1388 aa16.55■□□□□ 0.24
CDK5RAP3-203ENST00000577442 GIGYF1O75420 1035 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-203ENST00000577442 MIER1Q8N108 512 aa16.55■□□□□ 0.24
CDK5RAP3-203ENST00000577442 IL16Q14005 1332 aa16.54■□□□□ 0.24
CDK5RAP3-203ENST00000577442 A0A087WZG4 1122 aa16.54■□□□□ 0.24
CDK5RAP3-203ENST00000577442 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-203ENST00000577442 WWC1Q8IX03 1113 aa16.54■□□□□ 0.24
CDK5RAP3-203ENST00000577442 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-203ENST00000577442 ZNF853P0CG23 659 aa16.53■□□□□ 0.24
CDK5RAP3-203ENST00000577442 IL6STP40189 918 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-203ENST00000577442 ARHGEF1Q92888 912 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-203ENST00000577442 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
CDK5RAP3-203ENST00000577442 ERBB4Q15303 1308 aa16.52■□□□□ 0.24
CDK5RAP3-203ENST00000577442 PRAMEF22A3QJZ6 481 aa16.52■□□□□ 0.24
CDK5RAP3-203ENST00000577442 HOXB7P09629 217 aa16.52■□□□□ 0.24
CDK5RAP3-203ENST00000577442 PTGER2P43116 358 aa16.52■□□□□ 0.24
CDK5RAP3-203ENST00000577442 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
CDK5RAP3-203ENST00000577442 MBIPQ9NS73 344 aa16.52■□□□□ 0.24
CDK5RAP3-203ENST00000577442 USP42Q9H9J4 1324 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-203ENST00000577442 ZPR1O75312 459 aa16.51■□□□□ 0.23
CDK5RAP3-203ENST00000577442 A1BGP04217 495 aa16.51■□□□□ 0.23
CDK5RAP3-203ENST00000577442 EIF5P55010 431 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-203ENST00000577442 MSL1Q68DK7 614 aa16.51■□□□□ 0.23
CDK5RAP3-203ENST00000577442 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
CDK5RAP3-203ENST00000577442 SGIP1Q9BQI5 828 aa16.51■□□□□ 0.23
CDK5RAP3-203ENST00000577442 SENP3-EIF4A1A0A087X0R7 540 aa16.5■□□□□ 0.23
CDK5RAP3-203ENST00000577442 NLGN1Q8N2Q7 840 aa16.5■□□□□ 0.23
CDK5RAP3-203ENST00000577442 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-203ENST00000577442 SALL2Q9Y467 1007 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-203ENST00000577442 NARFQ9UHQ1 456 aa16.49■□□□□ 0.23
CDK5RAP3-203ENST00000577442 SCN7AQ01118 1682 aa16.49■□□□□ 0.23
CDK5RAP3-203ENST00000577442 GYS1P13807 737 aa16.48■□□□□ 0.23
CDK5RAP3-203ENST00000577442 ARXQ96QS3 562 aa16.48■□□□□ 0.23
CDK5RAP3-203ENST00000577442 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
CDK5RAP3-203ENST00000577442 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-203ENST00000577442 BCORQ6W2J9 1755 aa16.46■□□□□ 0.23
CDK5RAP3-203ENST00000577442 NBPF26B4DH59 902 aa16.46■□□□□ 0.23
CDK5RAP3-203ENST00000577442 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-203ENST00000577442 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
CDK5RAP3-203ENST00000577442 USPL1Q5W0Q7 1092 aa16.46■□□□□ 0.23
CDK5RAP3-203ENST00000577442 NBPF10Q6P3W6 841 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-203ENST00000577442 NBPF15Q8N660 670 aa16.46■□□□□ 0.23
CDK5RAP3-203ENST00000577442 RGL2O15211 777 aa16.45■□□□□ 0.22
CDK5RAP3-203ENST00000577442 MMP10P09238 476 aa16.45■□□□□ 0.22
CDK5RAP3-203ENST00000577442 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-203ENST00000577442 KRT24Q2M2I5 525 aa16.45■□□□□ 0.22
CDK5RAP3-203ENST00000577442 HDGFL1Q5TGJ6 251 aa16.45■□□□□ 0.22
CDK5RAP3-203ENST00000577442 DZIP3Q86Y13 1208 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-203ENST00000577442 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
CDK5RAP3-203ENST00000577442 TSR2Q969E8 191 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-203ENST00000577442 ZNF652Q9Y2D9 606 aa16.44■□□□□ 0.22
CDK5RAP3-203ENST00000577442 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
CDK5RAP3-203ENST00000577442 FANCIQ9NVI1 1328 aa16.44■□□□□ 0.22
CDK5RAP3-203ENST00000577442 FKBP8Q14318 412 aa16.43■□□□□ 0.22
CDK5RAP3-203ENST00000577442 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
CDK5RAP3-203ENST00000577442 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
CDK5RAP3-203ENST00000577442 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
CDK5RAP3-203ENST00000577442 CAMTA2O94983 1202 aa16.42■□□□□ 0.22
CDK5RAP3-203ENST00000577442 MYL6BP14649 208 aa16.42■□□□□ 0.22
CDK5RAP3-203ENST00000577442 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
CDK5RAP3-203ENST00000577442 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDK5RAP3-203ENST00000577442 CLEC4GQ6UXB4 293 aa16.41■□□□□ 0.22
CDK5RAP3-203ENST00000577442 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
CDK5RAP3-203ENST00000577442 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
CDK5RAP3-203ENST00000577442 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
CDK5RAP3-203ENST00000577442 FHDC1Q9C0D6 1143 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-203ENST00000577442 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
CDK5RAP3-203ENST00000577442 DBF4Q9UBU7 674 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-203ENST00000577442 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
CDK5RAP3-203ENST00000577442 CACNA1FO60840 1977 aa16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 ERVV-1B6SEH8 477 aa16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 E9PSI1 815 aa16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 NFIXQ14938 502 aa16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 PDIA6Q15084 440 aa16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 TWISTNBQ3B726 338 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 CCDC30Q5VVM6 783 aa16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
CDK5RAP3-203ENST00000577442 MAP3K15Q6ZN16 1313 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms