RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.89
NCBP3-207ENST00000577169 PRAMEF22A3QJZ6 481 aa20.58■□□□□ 0.89
NCBP3-207ENST00000577169 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
NCBP3-207ENST00000577169 ADRA2BP18089 450 aa20.58■□□□□ 0.89
NCBP3-207ENST00000577169 CANXP27824 592 aaKnown RBP20.58■□□□□ 0.89
NCBP3-207ENST00000577169 FAM9BQ8IZU0 186 aa20.58■□□□□ 0.89
NCBP3-207ENST00000577169 ZBTB1Q9Y2K1 713 aa20.58■□□□□ 0.89
NCBP3-207ENST00000577169 A1BGP04217 495 aa20.57■□□□□ 0.88
NCBP3-207ENST00000577169 POLD1P28340 1107 aa20.57■□□□□ 0.88
NCBP3-207ENST00000577169 RFC4P35249 363 aa20.57■□□□□ 0.88
NCBP3-207ENST00000577169 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
NCBP3-207ENST00000577169 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
NCBP3-207ENST00000577169 ARXQ96QS3 562 aa20.56■□□□□ 0.88
NCBP3-207ENST00000577169 BABAM1Q9NWV8 329 aa20.56■□□□□ 0.88
NCBP3-207ENST00000577169 LAS1LQ9Y4W2 734 aaKnown RBP20.56■□□□□ 0.88
NCBP3-207ENST00000577169 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
NCBP3-207ENST00000577169 CHL1O00533 1208 aa20.54■□□□□ 0.88
NCBP3-207ENST00000577169 DIEXFQ68CQ4 756 aaKnown RBP20.54■□□□□ 0.88
NCBP3-207ENST00000577169 KDM3BQ7LBC6 1761 aa20.54■□□□□ 0.88
NCBP3-207ENST00000577169 COL24A1Q17RW2 1714 aa20.53■□□□□ 0.88
NCBP3-207ENST00000577169 GIGYF1O75420 1035 aaPredicted RBP20.53■□□□□ 0.88
NCBP3-207ENST00000577169 SRP68Q9UHB9 627 aaKnown RBP20.53■□□□□ 0.88
NCBP3-207ENST00000577169 GYS1P13807 737 aa20.52■□□□□ 0.88
NCBP3-207ENST00000577169 EIF5P55010 431 aaKnown RBP20.52■□□□□ 0.88
NCBP3-207ENST00000577169 PIP4K2AP48426 406 aaPredicted RBP20.51■□□□□ 0.87
NCBP3-207ENST00000577169 NLGN1Q8N2Q7 840 aa20.51■□□□□ 0.87
NCBP3-207ENST00000577169 CFAP44Q96MT7 982 aa20.5■□□□□ 0.87
NCBP3-207ENST00000577169 FHDC1Q9C0D6 1143 aaPredicted RBP20.5■□□□□ 0.87
NCBP3-207ENST00000577169 ZPR1O75312 459 aa20.49■□□□□ 0.87
NCBP3-207ENST00000577169 IL6STP40189 918 aaPredicted RBP20.49■□□□□ 0.87
NCBP3-207ENST00000577169 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
NCBP3-207ENST00000577169 NARFQ9UHQ1 456 aa20.49■□□□□ 0.87
NCBP3-207ENST00000577169 ZNF330Q9Y3S2 320 aaPredicted RBP20.49■□□□□ 0.87
NCBP3-207ENST00000577169 SALL2Q9Y467 1007 aaPredicted RBP20.49■□□□□ 0.87
NCBP3-207ENST00000577169 USP42Q9H9J4 1324 aaKnown RBP20.49■□□□□ 0.87
NCBP3-207ENST00000577169 COL15A1P39059 1388 aa20.48■□□□□ 0.87
NCBP3-207ENST00000577169 A0A087WZG4 1122 aa20.48■□□□□ 0.87
NCBP3-207ENST00000577169 CCER2I3L3R5 266 aa20.48■□□□□ 0.87
NCBP3-207ENST00000577169 ZNF853P0CG23 659 aa20.48■□□□□ 0.87
NCBP3-207ENST00000577169 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
NCBP3-207ENST00000577169 CCDC27Q2M243 656 aa20.48■□□□□ 0.87
NCBP3-207ENST00000577169 SYT17Q9BSW7 474 aa20.48■□□□□ 0.87
NCBP3-207ENST00000577169 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
NCBP3-207ENST00000577169 NBPF26B4DH59 902 aa20.47■□□□□ 0.87
NCBP3-207ENST00000577169 FKBP8Q14318 412 aa20.47■□□□□ 0.87
NCBP3-207ENST00000577169 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
NCBP3-207ENST00000577169 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
NCBP3-207ENST00000577169 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
NCBP3-207ENST00000577169 NBPF15Q8N660 670 aa20.47■□□□□ 0.87
NCBP3-207ENST00000577169 TBC1D2BQ9UPU7 963 aa20.47■□□□□ 0.87
NCBP3-207ENST00000577169 MMP10P09238 476 aa20.46■□□□□ 0.87
NCBP3-207ENST00000577169 GNAI1P63096 354 aa20.46■□□□□ 0.87
NCBP3-207ENST00000577169 KRT24Q2M2I5 525 aa20.46■□□□□ 0.87
NCBP3-207ENST00000577169 NCBP3Q53F19 620 aaKnown RBP20.46■□□□□ 0.87
NCBP3-207ENST00000577169 NPM2Q86SE8 214 aaKnown RBP20.46■□□□□ 0.87
NCBP3-207ENST00000577169 MBIPQ9NS73 344 aa20.46■□□□□ 0.87
NCBP3-207ENST00000577169 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
NCBP3-207ENST00000577169 MIER1Q8N108 512 aa20.45■□□□□ 0.86
NCBP3-207ENST00000577169 BCL2L12Q9HB09 334 aa20.45■□□□□ 0.86
NCBP3-207ENST00000577169 IFT57Q9NWB7 429 aa20.45■□□□□ 0.86
NCBP3-207ENST00000577169 TM4SF1P30408 202 aa20.43■□□□□ 0.86
NCBP3-207ENST00000577169 DZIP3Q86Y13 1208 aaKnown RBP20.42■□□□□ 0.86
NCBP3-207ENST00000577169 NGEFQ8N5V2 710 aa20.42■□□□□ 0.86
NCBP3-207ENST00000577169 PARP3Q9Y6F1 533 aa20.42■□□□□ 0.86
NCBP3-207ENST00000577169 NECTIN2Q92692 538 aa20.41■□□□□ 0.86
NCBP3-207ENST00000577169 LAMB4A4D0S4 1761 aa20.41■□□□□ 0.86
NCBP3-207ENST00000577169 CAMTA2O94983 1202 aa20.4■□□□□ 0.86
NCBP3-207ENST00000577169 MYL6BP14649 208 aa20.4■□□□□ 0.86
NCBP3-207ENST00000577169 DUSP27Q5VZP5 1158 aa20.4■□□□□ 0.86
NCBP3-207ENST00000577169 CD2APQ9Y5K6 639 aa20.4■□□□□ 0.86
NCBP3-207ENST00000577169 DDR1Q08345 913 aa20.39■□□□□ 0.85
NCBP3-207ENST00000577169 NFIXQ14938 502 aa20.39■□□□□ 0.85
NCBP3-207ENST00000577169 WDR63Q8IWG1 891 aa20.39■□□□□ 0.85
NCBP3-207ENST00000577169 NLGN2Q8NFZ4 835 aa20.39■□□□□ 0.85
NCBP3-207ENST00000577169 IL16Q14005 1332 aa20.38■□□□□ 0.85
NCBP3-207ENST00000577169 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
NCBP3-207ENST00000577169 PDIA6Q15084 440 aa20.38■□□□□ 0.85
NCBP3-207ENST00000577169 BICDL1Q6ZP65 573 aa20.38■□□□□ 0.85
NCBP3-207ENST00000577169 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
NCBP3-207ENST00000577169 POLRMTO00411 1230 aaKnown RBP20.37■□□□□ 0.85
NCBP3-207ENST00000577169 TBC1D9BQ66K14 1250 aa20.37■□□□□ 0.85
NCBP3-207ENST00000577169 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
NCBP3-207ENST00000577169 TSR2Q969E8 191 aaKnown RBP20.37■□□□□ 0.85
NCBP3-207ENST00000577169 ANXA1P04083 346 aa20.36■□□□□ 0.85
NCBP3-207ENST00000577169 HOXB7P09629 217 aa20.36■□□□□ 0.85
NCBP3-207ENST00000577169 TTLL7Q6ZT98 887 aa20.36■□□□□ 0.85
NCBP3-207ENST00000577169 PROSER3Q2NL68 480 aa20.35■□□□□ 0.85
NCBP3-207ENST00000577169 SERPINB2P05120 415 aa20.34■□□□□ 0.85
NCBP3-207ENST00000577169 HLFQ16534 295 aa20.34■□□□□ 0.85
NCBP3-207ENST00000577169 HDGFL1Q5TGJ6 251 aa20.34■□□□□ 0.85
NCBP3-207ENST00000577169 CLEC4GQ6UXB4 293 aa20.34■□□□□ 0.85
NCBP3-207ENST00000577169 LRP10Q7Z4F1 713 aa20.34■□□□□ 0.85
NCBP3-207ENST00000577169 DDX21Q9NR30 783 aaKnown RBP eCLIP20.34■□□□□ 0.85
NCBP3-207ENST00000577169 SRCAPQ6ZRS2 3230 aa20.33■□□□□ 0.85
NCBP3-207ENST00000577169 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
NCBP3-207ENST00000577169 TSPYL6Q8N831 410 aa20.33■□□□□ 0.85
NCBP3-207ENST00000577169 SETDB2Q96T68 719 aa20.32■□□□□ 0.84
NCBP3-207ENST00000577169 SPINK5Q9NQ38 1064 aaPredicted RBP20.32■□□□□ 0.84
NCBP3-207ENST00000577169 CHPF2Q9P2E5 772 aa20.32■□□□□ 0.84
NCBP3-207ENST00000577169 ZNF652Q9Y2D9 606 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms