RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
NDE1-212ENST00000577101 SCN7AQ01118 1682 aa12.83□□□□□ -0.36
NDE1-212ENST00000577101 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
NDE1-212ENST00000577101 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
NDE1-212ENST00000577101 BABAM1Q9NWV8 329 aa12.82□□□□□ -0.36
NDE1-212ENST00000577101 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
NDE1-212ENST00000577101 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
NDE1-212ENST00000577101 GNPATO15228 680 aa12.81□□□□□ -0.36
NDE1-212ENST00000577101 RPS6KA4O75676 772 aa12.81□□□□□ -0.36
NDE1-212ENST00000577101 A1BGP04217 495 aa12.81□□□□□ -0.36
NDE1-212ENST00000577101 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
NDE1-212ENST00000577101 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
NDE1-212ENST00000577101 TSR2Q969E8 191 aaKnown RBP12.81□□□□□ -0.36
NDE1-212ENST00000577101 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
NDE1-212ENST00000577101 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
NDE1-212ENST00000577101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
NDE1-212ENST00000577101 LRP10Q7Z4F1 713 aa12.8□□□□□ -0.36
NDE1-212ENST00000577101 AK7Q96M32 723 aa12.8□□□□□ -0.36
NDE1-212ENST00000577101 SGIP1Q9BQI5 828 aa12.8□□□□□ -0.36
NDE1-212ENST00000577101 CCDC87Q9NVE4 849 aa12.8□□□□□ -0.36
NDE1-212ENST00000577101 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
NDE1-212ENST00000577101 PHF14O94880 888 aa12.79□□□□□ -0.36
NDE1-212ENST00000577101 SNRPA1P09661 255 aaKnown RBP12.79□□□□□ -0.36
NDE1-212ENST00000577101 PDIA6Q15084 440 aa12.79□□□□□ -0.36
NDE1-212ENST00000577101 WDR63Q8IWG1 891 aa12.79□□□□□ -0.36
NDE1-212ENST00000577101 TSPYL6Q8N831 410 aa12.79□□□□□ -0.36
NDE1-212ENST00000577101 C8orf58Q8NAV2 365 aa12.79□□□□□ -0.36
NDE1-212ENST00000577101 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
NDE1-212ENST00000577101 IL16Q14005 1332 aa12.79□□□□□ -0.36
NDE1-212ENST00000577101 ZBTB7AO95365 584 aa12.78□□□□□ -0.36
NDE1-212ENST00000577101 SSFA2P28290 1259 aa12.78□□□□□ -0.36
NDE1-212ENST00000577101 PTGER2P43116 358 aa12.78□□□□□ -0.36
NDE1-212ENST00000577101 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
NDE1-212ENST00000577101 GNAI1P63096 354 aa12.78□□□□□ -0.36
NDE1-212ENST00000577101 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
NDE1-212ENST00000577101 NUP98P52948 1817 aa12.78□□□□□ -0.36
NDE1-212ENST00000577101 AFDNP55196 1824 aaKnown RBP12.78□□□□□ -0.36
NDE1-212ENST00000577101 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.37
NDE1-212ENST00000577101 PROSER3Q2NL68 480 aa12.77□□□□□ -0.37
NDE1-212ENST00000577101 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.37
NDE1-212ENST00000577101 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
NDE1-212ENST00000577101 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
NDE1-212ENST00000577101 COL15A1P39059 1388 aa12.77□□□□□ -0.37
NDE1-212ENST00000577101 ANXA1P04083 346 aa12.76□□□□□ -0.37
NDE1-212ENST00000577101 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
NDE1-212ENST00000577101 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
NDE1-212ENST00000577101 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
NDE1-212ENST00000577101 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
NDE1-212ENST00000577101 DUSP27Q5VZP5 1158 aa12.75□□□□□ -0.37
NDE1-212ENST00000577101 MSL1Q68DK7 614 aa12.75□□□□□ -0.37
NDE1-212ENST00000577101 TRMT2AQ8IZ69 625 aaKnown RBP12.75□□□□□ -0.37
NDE1-212ENST00000577101 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
NDE1-212ENST00000577101 USP42Q9H9J4 1324 aaKnown RBP12.75□□□□□ -0.37
NDE1-212ENST00000577101 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
NDE1-212ENST00000577101 KIF13BQ9NQT8 1826 aa12.74□□□□□ -0.37
NDE1-212ENST00000577101 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
NDE1-212ENST00000577101 ELL2O00472 640 aaPredicted RBP12.74□□□□□ -0.37
NDE1-212ENST00000577101 STARD3NLO95772 234 aa12.74□□□□□ -0.37
NDE1-212ENST00000577101 GYS1P13807 737 aa12.74□□□□□ -0.37
NDE1-212ENST00000577101 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
NDE1-212ENST00000577101 CALD1Q05682 793 aaKnown RBP12.74□□□□□ -0.37
NDE1-212ENST00000577101 SLFN5Q08AF3 891 aa12.74□□□□□ -0.37
NDE1-212ENST00000577101 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
NDE1-212ENST00000577101 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
NDE1-212ENST00000577101 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
NDE1-212ENST00000577101 ADRA2BP18089 450 aa12.73□□□□□ -0.37
NDE1-212ENST00000577101 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
NDE1-212ENST00000577101 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
NDE1-212ENST00000577101 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 HOXB7P09629 217 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
NDE1-212ENST00000577101 FKBP8Q14318 412 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 TTLL7Q6ZT98 887 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 FLAD1Q8NFF5 587 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 NARFQ9UHQ1 456 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 TBC1D2BQ9UPU7 963 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 ANKRD31Q8N7Z5 1873 aa12.72□□□□□ -0.37
NDE1-212ENST00000577101 MSH5O43196 834 aa12.71□□□□□ -0.37
NDE1-212ENST00000577101 VAMP4O75379 141 aa12.71□□□□□ -0.37
NDE1-212ENST00000577101 MYL6BP14649 208 aa12.71□□□□□ -0.37
NDE1-212ENST00000577101 HNRNPUQ00839 825 aaKnown RBP eCLIP12.71□□□□□ -0.37
NDE1-212ENST00000577101 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
NDE1-212ENST00000577101 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.37
NDE1-212ENST00000577101 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
NDE1-212ENST00000577101 TCERG1O14776 1098 aaKnown RBP12.7□□□□□ -0.38
NDE1-212ENST00000577101 RFC4P35249 363 aa12.7□□□□□ -0.38
NDE1-212ENST00000577101 DDR1Q08345 913 aa12.7□□□□□ -0.38
NDE1-212ENST00000577101 HLFQ16534 295 aa12.7□□□□□ -0.38
NDE1-212ENST00000577101 TWISTNBQ3B726 338 aaPredicted RBP12.7□□□□□ -0.38
NDE1-212ENST00000577101 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
NDE1-212ENST00000577101 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
NDE1-212ENST00000577101 TM4SF1P30408 202 aa12.69□□□□□ -0.38
NDE1-212ENST00000577101 DZIP3Q86Y13 1208 aaKnown RBP12.69□□□□□ -0.38
NDE1-212ENST00000577101 SPON1Q9HCB6 807 aa12.69□□□□□ -0.38
NDE1-212ENST00000577101 DDX21Q9NR30 783 aaKnown RBP eCLIP12.69□□□□□ -0.38
NDE1-212ENST00000577101 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
NDE1-212ENST00000577101 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms