RNA–Protein interactions for RNA: ENST00000575637.1

CHRNE-203, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 3

Gene CHRNE, Length 557 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-203ENST00000575637 RFC4P35249 363 aa23.2■■□□□ 1.3
CHRNE-203ENST00000575637 NEUROD2Q15784 382 aa23.2■■□□□ 1.3
CHRNE-203ENST00000575637 SYT17Q9BSW7 474 aa23.19■■□□□ 1.3
CHRNE-203ENST00000575637 TEX13AQ9BXU3 409 aaPredicted RBP23.19■■□□□ 1.3
CHRNE-203ENST00000575637 LMOD3Q0VAK6 560 aa23.18■■□□□ 1.3
CHRNE-203ENST00000575637 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
CHRNE-203ENST00000575637 PRAMEF22A3QJZ6 481 aa23.17■■□□□ 1.3
CHRNE-203ENST00000575637 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
CHRNE-203ENST00000575637 SRP68Q9UHB9 627 aaKnown RBP23.17■■□□□ 1.3
CHRNE-203ENST00000575637 SNRPA1P09661 255 aaKnown RBP23.16■■□□□ 1.3
CHRNE-203ENST00000575637 GYS1P13807 737 aa23.16■■□□□ 1.3
CHRNE-203ENST00000575637 CANXP27824 592 aaKnown RBP23.16■■□□□ 1.3
CHRNE-203ENST00000575637 KLHL34Q8N239 644 aa23.16■■□□□ 1.3
CHRNE-203ENST00000575637 TRIM35Q9UPQ4 493 aa23.16■■□□□ 1.3
CHRNE-203ENST00000575637 USP16Q9Y5T5 823 aa23.15■■□□□ 1.3
CHRNE-203ENST00000575637 USP42Q9H9J4 1324 aaKnown RBP23.14■■□□□ 1.3
CHRNE-203ENST00000575637 APAF1O14727 1248 aa23.14■■□□□ 1.29
CHRNE-203ENST00000575637 A1BGP04217 495 aa23.14■■□□□ 1.29
CHRNE-203ENST00000575637 NLGN1Q8N2Q7 840 aa23.14■■□□□ 1.29
CHRNE-203ENST00000575637 COL15A1P39059 1388 aa23.14■■□□□ 1.29
CHRNE-203ENST00000575637 MMP10P09238 476 aa23.13■■□□□ 1.29
CHRNE-203ENST00000575637 EIF5P55010 431 aaKnown RBP23.13■■□□□ 1.29
CHRNE-203ENST00000575637 C4AP0C0L4 1744 aa23.13■■□□□ 1.29
CHRNE-203ENST00000575637 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
CHRNE-203ENST00000575637 FKBP8Q14318 412 aa23.11■■□□□ 1.29
CHRNE-203ENST00000575637 TSPYL4Q9UJ04 414 aa23.11■■□□□ 1.29
CHRNE-203ENST00000575637 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
CHRNE-203ENST00000575637 KDM3BQ7LBC6 1761 aa23.11■■□□□ 1.29
CHRNE-203ENST00000575637 ZPR1O75312 459 aa23.1■■□□□ 1.29
CHRNE-203ENST00000575637 NARFQ9UHQ1 456 aa23.1■■□□□ 1.29
CHRNE-203ENST00000575637 GIGYF1O75420 1035 aaPredicted RBP23.09■■□□□ 1.29
CHRNE-203ENST00000575637 IL6STP40189 918 aaPredicted RBP23.09■■□□□ 1.29
CHRNE-203ENST00000575637 PIP4K2AP48426 406 aaPredicted RBP23.09■■□□□ 1.29
CHRNE-203ENST00000575637 USPL1Q5W0Q7 1092 aa23.09■■□□□ 1.29
CHRNE-203ENST00000575637 NLGN2Q8NFZ4 835 aa23.09■■□□□ 1.29
CHRNE-203ENST00000575637 BABAM1Q9NWV8 329 aa23.09■■□□□ 1.29
CHRNE-203ENST00000575637 UTRNP46939 3433 aa23.08■■□□□ 1.29
CHRNE-203ENST00000575637 ZNF330Q9Y3S2 320 aaPredicted RBP23.08■■□□□ 1.29
CHRNE-203ENST00000575637 CD2APQ9Y5K6 639 aa23.07■■□□□ 1.28
CHRNE-203ENST00000575637 A0A087WZG4 1122 aa23.06■■□□□ 1.28
CHRNE-203ENST00000575637 NBPF26B4DH59 902 aa23.06■■□□□ 1.28
CHRNE-203ENST00000575637 CHL1O00533 1208 aa23.06■■□□□ 1.28
CHRNE-203ENST00000575637 NBPF10Q6P3W6 841 aaKnown RBP23.06■■□□□ 1.28
CHRNE-203ENST00000575637 NBPF15Q8N660 670 aa23.06■■□□□ 1.28
CHRNE-203ENST00000575637 BCL2L12Q9HB09 334 aa23.06■■□□□ 1.28
CHRNE-203ENST00000575637 TBC1D2BQ9UPU7 963 aa23.05■■□□□ 1.28
CHRNE-203ENST00000575637 TM4SF1P30408 202 aa23.04■■□□□ 1.28
CHRNE-203ENST00000575637 DDR1Q08345 913 aa23.04■■□□□ 1.28
CHRNE-203ENST00000575637 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
CHRNE-203ENST00000575637 PARP3Q9Y6F1 533 aa23.04■■□□□ 1.28
CHRNE-203ENST00000575637 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
CHRNE-203ENST00000575637 DCAF8L1A6NGE4 600 aa23.02■■□□□ 1.28
CHRNE-203ENST00000575637 NPM2Q86SE8 214 aaKnown RBP23.02■■□□□ 1.28
CHRNE-203ENST00000575637 NFIXQ14938 502 aa23.01■■□□□ 1.27
CHRNE-203ENST00000575637 CFAP44Q96MT7 982 aa23.01■■□□□ 1.27
CHRNE-203ENST00000575637 POLRMTO00411 1230 aaKnown RBP23■■□□□ 1.27
CHRNE-203ENST00000575637 CAMTA2O94983 1202 aa23■■□□□ 1.27
CHRNE-203ENST00000575637 DZIP3Q86Y13 1208 aaKnown RBP23■■□□□ 1.27
CHRNE-203ENST00000575637 KRT24Q2M2I5 525 aa22.99■■□□□ 1.27
CHRNE-203ENST00000575637 LAMB4A4D0S4 1761 aa22.99■■□□□ 1.27
CHRNE-203ENST00000575637 C10orf71Q711Q0 1435 aa22.99■■□□□ 1.27
CHRNE-203ENST00000575637 ZNF853P0CG23 659 aa22.98■■□□□ 1.27
CHRNE-203ENST00000575637 CALD1Q05682 793 aaKnown RBP22.98■■□□□ 1.27
CHRNE-203ENST00000575637 FAM9BQ8IZU0 186 aa22.98■■□□□ 1.27
CHRNE-203ENST00000575637 TBC1D9BQ66K14 1250 aa22.97■■□□□ 1.27
CHRNE-203ENST00000575637 MBIPQ9NS73 344 aa22.97■■□□□ 1.27
CHRNE-203ENST00000575637 IFT57Q9NWB7 429 aa22.97■■□□□ 1.27
CHRNE-203ENST00000575637 EIF2S2P20042 333 aaKnown RBP22.96■■□□□ 1.27
CHRNE-203ENST00000575637 GPR162Q16538 588 aa22.96■■□□□ 1.27
CHRNE-203ENST00000575637 CCDC27Q2M243 656 aa22.96■■□□□ 1.27
CHRNE-203ENST00000575637 BICDL1Q6ZP65 573 aa22.96■■□□□ 1.27
CHRNE-203ENST00000575637 GNAI1P63096 354 aa22.95■■□□□ 1.26
CHRNE-203ENST00000575637 SCN7AQ01118 1682 aa22.95■■□□□ 1.26
CHRNE-203ENST00000575637 WWC1Q8IX03 1113 aa22.95■■□□□ 1.26
CHRNE-203ENST00000575637 PELP1Q8IZL8 1130 aaKnown RBP22.95■■□□□ 1.26
CHRNE-203ENST00000575637 ERBB4Q15303 1308 aa22.94■■□□□ 1.26
CHRNE-203ENST00000575637 MYL6BP14649 208 aa22.94■■□□□ 1.26
CHRNE-203ENST00000575637 NGEFQ8N5V2 710 aa22.94■■□□□ 1.26
CHRNE-203ENST00000575637 PXDNLA1KZ92 1463 aa22.93■■□□□ 1.26
CHRNE-203ENST00000575637 SERPINB2P05120 415 aa22.93■■□□□ 1.26
CHRNE-203ENST00000575637 YBX3P16989 372 aaKnown RBP eCLIP22.93■■□□□ 1.26
CHRNE-203ENST00000575637 PDIA6Q15084 440 aa22.93■■□□□ 1.26
CHRNE-203ENST00000575637 TGFB2P61812 414 aa22.92■■□□□ 1.26
CHRNE-203ENST00000575637 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
CHRNE-203ENST00000575637 TTLL7Q6ZT98 887 aa22.92■■□□□ 1.26
CHRNE-203ENST00000575637 NECTIN2Q92692 538 aa22.92■■□□□ 1.26
CHRNE-203ENST00000575637 A0A0G2JLW4 131 aa22.91■■□□□ 1.26
CHRNE-203ENST00000575637 PROSER3Q2NL68 480 aa22.91■■□□□ 1.26
CHRNE-203ENST00000575637 CLEC4GQ6UXB4 293 aa22.91■■□□□ 1.26
CHRNE-203ENST00000575637 LRP10Q7Z4F1 713 aa22.91■■□□□ 1.26
CHRNE-203ENST00000575637 WWC3Q9ULE0 1092 aa22.91■■□□□ 1.26
CHRNE-203ENST00000575637 SALL2Q9Y467 1007 aaPredicted RBP22.91■■□□□ 1.26
CHRNE-203ENST00000575637 KIF13BQ9NQT8 1826 aa22.9■■□□□ 1.26
CHRNE-203ENST00000575637 ANXA1P04083 346 aa22.9■■□□□ 1.26
CHRNE-203ENST00000575637 DPEP1P16444 411 aa22.9■■□□□ 1.26
CHRNE-203ENST00000575637 ZNF652Q9Y2D9 606 aa22.9■■□□□ 1.26
CHRNE-203ENST00000575637 BCORQ6W2J9 1755 aa22.89■■□□□ 1.26
CHRNE-203ENST00000575637 RGL2O15211 777 aa22.89■■□□□ 1.25
CHRNE-203ENST00000575637 HOXB7P09629 217 aa22.89■■□□□ 1.25
CHRNE-203ENST00000575637 HLFQ16534 295 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms