RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 COL15A1P39059 1388 aa18.25■□□□□ 0.51
RPAIN-211ENST00000572174 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
RPAIN-211ENST00000572174 A0A087WZG4 1122 aa18.24■□□□□ 0.51
RPAIN-211ENST00000572174 NLGN1Q8N2Q7 840 aa18.24■□□□□ 0.51
RPAIN-211ENST00000572174 TSPYL4Q9UJ04 414 aa18.24■□□□□ 0.51
RPAIN-211ENST00000572174 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-211ENST00000572174 APAF1O14727 1248 aa18.23■□□□□ 0.51
RPAIN-211ENST00000572174 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
RPAIN-211ENST00000572174 INTS5Q6P9B9 1019 aaKnown RBP18.23■□□□□ 0.51
RPAIN-211ENST00000572174 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
RPAIN-211ENST00000572174 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
RPAIN-211ENST00000572174 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
RPAIN-211ENST00000572174 ZPR1O75312 459 aa18.22■□□□□ 0.51
RPAIN-211ENST00000572174 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
RPAIN-211ENST00000572174 THUMPD2Q9BTF0 503 aaKnown RBP18.22■□□□□ 0.51
RPAIN-211ENST00000572174 IL6STP40189 918 aaPredicted RBP18.21■□□□□ 0.51
RPAIN-211ENST00000572174 CCDC184Q52MB2 194 aa18.21■□□□□ 0.51
RPAIN-211ENST00000572174 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
RPAIN-211ENST00000572174 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
RPAIN-211ENST00000572174 ZBTB1Q9Y2K1 713 aa18.21■□□□□ 0.51
RPAIN-211ENST00000572174 KIF13BQ9NQT8 1826 aa18.21■□□□□ 0.51
RPAIN-211ENST00000572174 USP42Q9H9J4 1324 aaKnown RBP18.21■□□□□ 0.51
RPAIN-211ENST00000572174 KCNQ3O43525 872 aa18.2■□□□□ 0.5
RPAIN-211ENST00000572174 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
RPAIN-211ENST00000572174 CANXP27824 592 aaKnown RBP18.19■□□□□ 0.5
RPAIN-211ENST00000572174 EIF4A1P60842 406 aaKnown RBP18.19■□□□□ 0.5
RPAIN-211ENST00000572174 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
RPAIN-211ENST00000572174 ERBB4Q15303 1308 aa18.19■□□□□ 0.5
RPAIN-211ENST00000572174 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-211ENST00000572174 EIF5P55010 431 aaKnown RBP18.18■□□□□ 0.5
RPAIN-211ENST00000572174 GNAI1P63096 354 aa18.18■□□□□ 0.5
RPAIN-211ENST00000572174 CCDC27Q2M243 656 aa18.18■□□□□ 0.5
RPAIN-211ENST00000572174 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
RPAIN-211ENST00000572174 MIS18AQ9NYP9 233 aa18.18■□□□□ 0.5
RPAIN-211ENST00000572174 NARFQ9UHQ1 456 aa18.18■□□□□ 0.5
RPAIN-211ENST00000572174 CCER2I3L3R5 266 aa18.17■□□□□ 0.5
RPAIN-211ENST00000572174 CHL1O00533 1208 aa18.17■□□□□ 0.5
RPAIN-211ENST00000572174 GYS1P13807 737 aa18.17■□□□□ 0.5
RPAIN-211ENST00000572174 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
RPAIN-211ENST00000572174 FHDC1Q9C0D6 1143 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-211ENST00000572174 IFT57Q9NWB7 429 aa18.16■□□□□ 0.5
RPAIN-211ENST00000572174 CACNA1FO60840 1977 aa18.16■□□□□ 0.5
RPAIN-211ENST00000572174 AFDNP55196 1824 aaKnown RBP18.16■□□□□ 0.5
RPAIN-211ENST00000572174 RGL2O15211 777 aa18.15■□□□□ 0.5
RPAIN-211ENST00000572174 HOXB7P09629 217 aa18.15■□□□□ 0.5
RPAIN-211ENST00000572174 SYT17Q9BSW7 474 aa18.15■□□□□ 0.5
RPAIN-211ENST00000572174 ZNF330Q9Y3S2 320 aaPredicted RBP18.15■□□□□ 0.5
RPAIN-211ENST00000572174 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
RPAIN-211ENST00000572174 CD2APQ9Y5K6 639 aa18.15■□□□□ 0.5
RPAIN-211ENST00000572174 USP16Q9Y5T5 823 aa18.15■□□□□ 0.5
RPAIN-211ENST00000572174 PARP3Q9Y6F1 533 aa18.15■□□□□ 0.5
RPAIN-211ENST00000572174 A1BGP04217 495 aa18.14■□□□□ 0.49
RPAIN-211ENST00000572174 MMP10P09238 476 aa18.14■□□□□ 0.49
RPAIN-211ENST00000572174 FAM9BQ8IZU0 186 aa18.14■□□□□ 0.49
RPAIN-211ENST00000572174 KLHL34Q8N239 644 aa18.14■□□□□ 0.49
RPAIN-211ENST00000572174 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
RPAIN-211ENST00000572174 NUP98P52948 1817 aa18.14■□□□□ 0.49
RPAIN-211ENST00000572174 NRXN2Q9P2S2 1712 aa18.13■□□□□ 0.49
RPAIN-211ENST00000572174 SMIM5Q71RC9 77 aa18.13■□□□□ 0.49
RPAIN-211ENST00000572174 CHD4Q14839 1912 aa18.12■□□□□ 0.49
RPAIN-211ENST00000572174 USPL1Q5W0Q7 1092 aa18.12■□□□□ 0.49
RPAIN-211ENST00000572174 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
RPAIN-211ENST00000572174 IL16Q14005 1332 aa18.12■□□□□ 0.49
RPAIN-211ENST00000572174 DZIP3Q86Y13 1208 aaKnown RBP18.11■□□□□ 0.49
RPAIN-211ENST00000572174 SRP68Q9UHB9 627 aaKnown RBP18.11■□□□□ 0.49
RPAIN-211ENST00000572174 PRAMEF22A3QJZ6 481 aa18.1■□□□□ 0.49
RPAIN-211ENST00000572174 CLEC4GQ6UXB4 293 aa18.1■□□□□ 0.49
RPAIN-211ENST00000572174 WWC1Q8IX03 1113 aa18.1■□□□□ 0.49
RPAIN-211ENST00000572174 ANKRD36CQ5JPF3 1778 aa18.09■□□□□ 0.49
RPAIN-211ENST00000572174 C10orf71Q711Q0 1435 aa18.09■□□□□ 0.49
RPAIN-211ENST00000572174 ZNF853P0CG23 659 aa18.09■□□□□ 0.49
RPAIN-211ENST00000572174 FKBP8Q14318 412 aa18.09■□□□□ 0.49
RPAIN-211ENST00000572174 KIF6Q6ZMV9 814 aa18.09■□□□□ 0.49
RPAIN-211ENST00000572174 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
RPAIN-211ENST00000572174 CARMIL3Q8ND23 1372 aa18.08■□□□□ 0.49
RPAIN-211ENST00000572174 BRCA1P38398 1863 aaKnown RBP18.08■□□□□ 0.49
RPAIN-211ENST00000572174 WDR63Q8IWG1 891 aa18.08■□□□□ 0.48
RPAIN-211ENST00000572174 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-211ENST00000572174 TBC1D2BQ9UPU7 963 aa18.07■□□□□ 0.48
RPAIN-211ENST00000572174 DLEC1Q9Y238 1755 aa18.07■□□□□ 0.48
RPAIN-211ENST00000572174 NBPF26B4DH59 902 aa18.06■□□□□ 0.48
RPAIN-211ENST00000572174 CAMTA2O94983 1202 aa18.06■□□□□ 0.48
RPAIN-211ENST00000572174 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
RPAIN-211ENST00000572174 TM4SF1P30408 202 aa18.06■□□□□ 0.48
RPAIN-211ENST00000572174 NBPF10Q6P3W6 841 aaKnown RBP18.06■□□□□ 0.48
RPAIN-211ENST00000572174 NBPF15Q8N660 670 aa18.06■□□□□ 0.48
RPAIN-211ENST00000572174 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
RPAIN-211ENST00000572174 ERVV-1B6SEH8 477 aa18.05■□□□□ 0.48
RPAIN-211ENST00000572174 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
RPAIN-211ENST00000572174 TGFB2P61812 414 aa18.05■□□□□ 0.48
RPAIN-211ENST00000572174 NFIXQ14938 502 aa18.05■□□□□ 0.48
RPAIN-211ENST00000572174 HDGFL1Q5TGJ6 251 aa18.05■□□□□ 0.48
RPAIN-211ENST00000572174 SETDB2Q96T68 719 aa18.05■□□□□ 0.48
RPAIN-211ENST00000572174 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
RPAIN-211ENST00000572174 NPHP1O15259 732 aa18.04■□□□□ 0.48
RPAIN-211ENST00000572174 DUSP27Q5VZP5 1158 aa18.04■□□□□ 0.48
RPAIN-211ENST00000572174 BCL2L12Q9HB09 334 aa18.04■□□□□ 0.48
RPAIN-211ENST00000572174 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
RPAIN-211ENST00000572174 DBF4Q9UBU7 674 aaPredicted RBP18.04■□□□□ 0.48
RPAIN-211ENST00000572174 MAP3K15Q6ZN16 1313 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms