RNA–Protein interactions for RNA: ENST00000571945.5

ABR-215, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-215	ENST00000571945	BABAM1	Q9NWV8	329 aa		33.23	■■■□□ 2.91
ABR-215	ENST00000571945	SOS1	Q07889	1333 aa	Predicted RBP	33.23	■■■□□ 2.91
ABR-215	ENST00000571945	NEUROD2	Q15784	382 aa		33.22	■■■□□ 2.91
ABR-215	ENST00000571945	ARX	Q96QS3	562 aa		33.21	■■■□□ 2.91
ABR-215	ENST00000571945	TRIM35	Q9UPQ4	493 aa		33.21	■■■□□ 2.91
ABR-215	ENST00000571945	ZBTB1	Q9Y2K1	713 aa		33.21	■■■□□ 2.91
ABR-215	ENST00000571945	SNRPA1	P09661	255 aa	Known RBP	33.2	■■■□□ 2.91
ABR-215	ENST00000571945	ARHGEF1	Q92888	912 aa	Known RBP	33.2	■■■□□ 2.91
ABR-215	ENST00000571945	APAF1	O14727	1248 aa		33.19	■■■□□ 2.9
ABR-215	ENST00000571945	RFC4	P35249	363 aa		33.19	■■■□□ 2.9
ABR-215	ENST00000571945	MSL1	Q68DK7	614 aa		33.19	■■■□□ 2.9
ABR-215	ENST00000571945	COL15A1	P39059	1388 aa		33.19	■■■□□ 2.9
ABR-215	ENST00000571945	MIS18A	Q9NYP9	233 aa		33.18	■■■□□ 2.9
ABR-215	ENST00000571945	USP42	Q9H9J4	1324 aa	Known RBP	33.16	■■■□□ 2.9
ABR-215	ENST00000571945	SCN7A	Q01118	1682 aa		33.15	■■■□□ 2.9
ABR-215	ENST00000571945	TSPYL4	Q9UJ04	414 aa		33.15	■■■□□ 2.9
ABR-215	ENST00000571945	EIF4A1	P60842	406 aa	Known RBP	33.14	■■■□□ 2.9
ABR-215	ENST00000571945	GYS1	P13807	737 aa		33.12	■■■□□ 2.89
ABR-215	ENST00000571945	NLGN1	Q8N2Q7	840 aa		33.12	■■■□□ 2.89
ABR-215	ENST00000571945	CANX	P27824	592 aa	Known RBP	33.11	■■■□□ 2.89
ABR-215	ENST00000571945	IL6ST	P40189	918 aa	Predicted RBP	33.11	■■■□□ 2.89
ABR-215	ENST00000571945	EIF5	P55010	431 aa	Known RBP	33.11	■■■□□ 2.89
ABR-215	ENST00000571945	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.11	■■■□□ 2.89
ABR-215	ENST00000571945	USP16	Q9Y5T5	823 aa		33.11	■■■□□ 2.89
ABR-215	ENST00000571945	PRAMEF22	A3QJZ6	481 aa		33.1	■■■□□ 2.89
ABR-215	ENST00000571945	CALD1	Q05682	793 aa	Known RBP	33.1	■■■□□ 2.89
ABR-215	ENST00000571945	BCOR	Q6W2J9	1755 aa		33.1	■■■□□ 2.89
ABR-215	ENST00000571945		A0A087WZG4	1122 aa		33.09	■■■□□ 2.89
ABR-215	ENST00000571945	GIGYF1	O75420	1035 aa	Predicted RBP	33.09	■■■□□ 2.89
ABR-215	ENST00000571945	CHL1	O00533	1208 aa		33.08	■■■□□ 2.89
ABR-215	ENST00000571945	NCBP3	Q53F19	620 aa	Known RBP	33.08	■■■□□ 2.89
ABR-215	ENST00000571945	ZPR1	O75312	459 aa		33.07	■■■□□ 2.88
ABR-215	ENST00000571945	A1BG	P04217	495 aa		33.07	■■■□□ 2.88
ABR-215	ENST00000571945	SRP68	Q9UHB9	627 aa	Known RBP	33.07	■■■□□ 2.88
ABR-215	ENST00000571945	NARF	Q9UHQ1	456 aa		33.07	■■■□□ 2.88
ABR-215	ENST00000571945	KIF13B	Q9NQT8	1826 aa		33.05	■■■□□ 2.88
ABR-215	ENST00000571945	CCDC27	Q2M243	656 aa		33.05	■■■□□ 2.88
ABR-215	ENST00000571945	CFAP44	Q96MT7	982 aa		33.05	■■■□□ 2.88
ABR-215	ENST00000571945	SYT17	Q9BSW7	474 aa		33.05	■■■□□ 2.88
ABR-215	ENST00000571945	MMP10	P09238	476 aa		33.04	■■■□□ 2.88
ABR-215	ENST00000571945	USPL1	Q5W0Q7	1092 aa		33.02	■■■□□ 2.88
ABR-215	ENST00000571945	NPM2	Q86SE8	214 aa	Known RBP	33.02	■■■□□ 2.88
ABR-215	ENST00000571945	IFT57	Q9NWB7	429 aa		33.02	■■■□□ 2.88
ABR-215	ENST00000571945	ERBB4	Q15303	1308 aa		33.01	■■■□□ 2.87
ABR-215	ENST00000571945	CCER2	I3L3R5	266 aa		33	■■■□□ 2.87
ABR-215	ENST00000571945	FKBP8	Q14318	412 aa		33	■■■□□ 2.87
ABR-215	ENST00000571945	FAM9B	Q8IZU0	186 aa		33	■■■□□ 2.87
ABR-215	ENST00000571945	LAS1L	Q9Y4W2	734 aa	Known RBP	33	■■■□□ 2.87
ABR-215	ENST00000571945	ZNF853	P0CG23	659 aa		32.99	■■■□□ 2.87
ABR-215	ENST00000571945	GNAI1	P63096	354 aa		32.99	■■■□□ 2.87
ABR-215	ENST00000571945	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.99	■■■□□ 2.87
ABR-215	ENST00000571945	CD2AP	Q9Y5K6	639 aa		32.99	■■■□□ 2.87
ABR-215	ENST00000571945	NBPF26	B4DH59	902 aa		32.98	■■■□□ 2.87
ABR-215	ENST00000571945	NBPF10	Q6P3W6	841 aa	Known RBP	32.98	■■■□□ 2.87
ABR-215	ENST00000571945	KLHL34	Q8N239	644 aa		32.98	■■■□□ 2.87
ABR-215	ENST00000571945	NBPF15	Q8N660	670 aa		32.98	■■■□□ 2.87
ABR-215	ENST00000571945	NRXN2	Q9P2S2	1712 aa		32.97	■■■□□ 2.87
ABR-215	ENST00000571945	C10orf71	Q711Q0	1435 aa		32.96	■■■□□ 2.87
ABR-215	ENST00000571945	BCL2L12	Q9HB09	334 aa		32.96	■■■□□ 2.87
ABR-215	ENST00000571945	MBIP	Q9NS73	344 aa		32.96	■■■□□ 2.87
ABR-215	ENST00000571945	AFDN	P55196	1824 aa	Known RBP	32.95	■■■□□ 2.87
ABR-215	ENST00000571945	HOXB7	P09629	217 aa		32.95	■■■□□ 2.87
ABR-215	ENST00000571945	PIP4K2A	P48426	406 aa	Predicted RBP	32.95	■■■□□ 2.87
ABR-215	ENST00000571945	WWC1	Q8IX03	1113 aa		32.95	■■■□□ 2.87
ABR-215	ENST00000571945	NGEF	Q8N5V2	710 aa		32.95	■■■□□ 2.87
ABR-215	ENST00000571945	PARP3	Q9Y6F1	533 aa		32.95	■■■□□ 2.87
ABR-215	ENST00000571945	DZIP3	Q86Y13	1208 aa	Known RBP	32.94	■■■□□ 2.86
ABR-215	ENST00000571945	RGL2	O15211	777 aa		32.93	■■■□□ 2.86
ABR-215	ENST00000571945	TBC1D2B	Q9UPU7	963 aa		32.93	■■■□□ 2.86
ABR-215	ENST00000571945	KIAA1551	Q9HCM1	1747 aa		32.93	■■■□□ 2.86
ABR-215	ENST00000571945	CAMTA2	O94983	1202 aa		32.92	■■■□□ 2.86
ABR-215	ENST00000571945	TM4SF1	P30408	202 aa		32.92	■■■□□ 2.86
ABR-215	ENST00000571945	DDR1	Q08345	913 aa		32.92	■■■□□ 2.86
ABR-215	ENST00000571945	DIEXF	Q68CQ4	756 aa	Known RBP	32.92	■■■□□ 2.86
ABR-215	ENST00000571945	IL16	Q14005	1332 aa		32.92	■■■□□ 2.86
ABR-215	ENST00000571945	POLRMT	O00411	1230 aa	Known RBP	32.9	■■■□□ 2.86
ABR-215	ENST00000571945	NFIX	Q14938	502 aa		32.9	■■■□□ 2.86
ABR-215	ENST00000571945	NLGN2	Q8NFZ4	835 aa		32.89	■■■□□ 2.86
ABR-215	ENST00000571945	KRT24	Q2M2I5	525 aa		32.88	■■■□□ 2.85
ABR-215	ENST00000571945	DCAF8L1	A6NGE4	600 aa		32.87	■■■□□ 2.85
ABR-215	ENST00000571945	ZNF652	Q9Y2D9	606 aa		32.87	■■■□□ 2.85
ABR-215	ENST00000571945	NUP98	P52948	1817 aa		32.86	■■■□□ 2.85
ABR-215	ENST00000571945	CLEC4G	Q6UXB4	293 aa		32.86	■■■□□ 2.85
ABR-215	ENST00000571945	SENP3-EIF4A1	A0A087X0R7	540 aa		32.85	■■■□□ 2.85
ABR-215	ENST00000571945	EIF2S2	P20042	333 aa	Known RBP	32.85	■■■□□ 2.85
ABR-215	ENST00000571945	CARMIL3	Q8ND23	1372 aa		32.84	■■■□□ 2.85
ABR-215	ENST00000571945	WDR63	Q8IWG1	891 aa		32.84	■■■□□ 2.85
ABR-215	ENST00000571945	PXDNL	A1KZ92	1463 aa		32.84	■■■□□ 2.85
ABR-215	ENST00000571945	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.83	■■■□□ 2.85
ABR-215	ENST00000571945	MYL6B	P14649	208 aa		32.83	■■■□□ 2.85
ABR-215	ENST00000571945	PDIA6	Q15084	440 aa		32.83	■■■□□ 2.85
ABR-215	ENST00000571945	DUSP27	Q5VZP5	1158 aa		32.83	■■■□□ 2.85
ABR-215	ENST00000571945	TBC1D9B	Q66K14	1250 aa		32.83	■■■□□ 2.85
ABR-215	ENST00000571945	BRCA1	P38398	1863 aa	Known RBP	32.82	■■■□□ 2.85
ABR-215	ENST00000571945	HDGFL1	Q5TGJ6	251 aa		32.82	■■■□□ 2.84
ABR-215	ENST00000571945	LRP10	Q7Z4F1	713 aa		32.82	■■■□□ 2.84
ABR-215	ENST00000571945	KIF6	Q6ZMV9	814 aa		32.81	■■■□□ 2.84
ABR-215	ENST00000571945	MAP3K15	Q6ZN16	1313 aa		32.8	■■■□□ 2.84
ABR-215	ENST00000571945	ERVV-1	B6SEH8	477 aa		32.8	■■■□□ 2.84
ABR-215	ENST00000571945	TGFB2	P61812	414 aa		32.8	■■■□□ 2.84

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