RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
RPAIN-207ENST00000570883 TAF7Q15545 349 aaPredicted RBP17.71■□□□□ 0.43
RPAIN-207ENST00000570883 RUNDC1Q96C34 613 aa17.71■□□□□ 0.43
RPAIN-207ENST00000570883 MIS18AQ9NYP9 233 aa17.71■□□□□ 0.43
RPAIN-207ENST00000570883 KIAA1551Q9HCM1 1747 aa17.7■□□□□ 0.42
RPAIN-207ENST00000570883 COL15A1P39059 1388 aa17.7■□□□□ 0.42
RPAIN-207ENST00000570883 GYS1P13807 737 aa17.7■□□□□ 0.42
RPAIN-207ENST00000570883 RIPK4P57078 832 aa17.7■□□□□ 0.42
RPAIN-207ENST00000570883 SRP68Q9UHB9 627 aaKnown RBP17.7■□□□□ 0.42
RPAIN-207ENST00000570883 BCORQ6W2J9 1755 aa17.7■□□□□ 0.42
RPAIN-207ENST00000570883 PRAMEF22A3QJZ6 481 aa17.69■□□□□ 0.42
RPAIN-207ENST00000570883 RFC4P35249 363 aa17.69■□□□□ 0.42
RPAIN-207ENST00000570883 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
RPAIN-207ENST00000570883 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
RPAIN-207ENST00000570883 ANP32CO43423 234 aa17.68■□□□□ 0.42
RPAIN-207ENST00000570883 STARD3NLO95772 234 aa17.68■□□□□ 0.42
RPAIN-207ENST00000570883 KLHL34Q8N239 644 aa17.68■□□□□ 0.42
RPAIN-207ENST00000570883 UTRNP46939 3433 aa17.68■□□□□ 0.42
RPAIN-207ENST00000570883 CANXP27824 592 aaKnown RBP17.67■□□□□ 0.42
RPAIN-207ENST00000570883 NLGN2Q8NFZ4 835 aa17.67■□□□□ 0.42
RPAIN-207ENST00000570883 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
RPAIN-207ENST00000570883 MMP10P09238 476 aa17.66■□□□□ 0.42
RPAIN-207ENST00000570883 EIF5P55010 431 aaKnown RBP17.66■□□□□ 0.42
RPAIN-207ENST00000570883 NEUROD2Q15784 382 aa17.66■□□□□ 0.42
RPAIN-207ENST00000570883 TEX13AQ9BXU3 409 aaPredicted RBP17.66■□□□□ 0.42
RPAIN-207ENST00000570883 USP16Q9Y5T5 823 aa17.66■□□□□ 0.42
RPAIN-207ENST00000570883 N4BP2Q86UW6 1770 aaPredicted RBP17.66■□□□□ 0.42
RPAIN-207ENST00000570883 NRXN2Q9P2S2 1712 aa17.65■□□□□ 0.42
RPAIN-207ENST00000570883 A1BGP04217 495 aa17.65■□□□□ 0.42
RPAIN-207ENST00000570883 SNRPA1P09661 255 aaKnown RBP17.65■□□□□ 0.42
RPAIN-207ENST00000570883 LMOD3Q0VAK6 560 aa17.65■□□□□ 0.42
RPAIN-207ENST00000570883 NLGN1Q8N2Q7 840 aa17.65■□□□□ 0.42
RPAIN-207ENST00000570883 PNISRQ8TF01 805 aaKnown RBP17.65■□□□□ 0.42
RPAIN-207ENST00000570883 FKBP8Q14318 412 aa17.64■□□□□ 0.41
RPAIN-207ENST00000570883 BRCA1P38398 1863 aaKnown RBP17.64■□□□□ 0.41
RPAIN-207ENST00000570883 CHD4Q14839 1912 aa17.64■□□□□ 0.41
RPAIN-207ENST00000570883 APAF1O14727 1248 aa17.63■□□□□ 0.41
RPAIN-207ENST00000570883 PIP4K2AP48426 406 aaPredicted RBP17.63■□□□□ 0.41
RPAIN-207ENST00000570883 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
RPAIN-207ENST00000570883 USPL1Q5W0Q7 1092 aa17.63■□□□□ 0.41
RPAIN-207ENST00000570883 BCL2L12Q9HB09 334 aa17.63■□□□□ 0.41
RPAIN-207ENST00000570883 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
RPAIN-207ENST00000570883 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
RPAIN-207ENST00000570883 C10orf71Q711Q0 1435 aa17.63■□□□□ 0.41
RPAIN-207ENST00000570883 IL6STP40189 918 aaPredicted RBP17.62■□□□□ 0.41
RPAIN-207ENST00000570883 DDR1Q08345 913 aa17.62■□□□□ 0.41
RPAIN-207ENST00000570883 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
RPAIN-207ENST00000570883 ZPR1O75312 459 aa17.61■□□□□ 0.41
RPAIN-207ENST00000570883 GIGYF1O75420 1035 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-207ENST00000570883 TSPYL4Q9UJ04 414 aa17.61■□□□□ 0.41
RPAIN-207ENST00000570883 NBPF26B4DH59 902 aa17.6■□□□□ 0.41
RPAIN-207ENST00000570883 NBPF10Q6P3W6 841 aaKnown RBP17.6■□□□□ 0.41
RPAIN-207ENST00000570883 NBPF15Q8N660 670 aa17.6■□□□□ 0.41
RPAIN-207ENST00000570883 ZNF330Q9Y3S2 320 aaPredicted RBP17.6■□□□□ 0.41
RPAIN-207ENST00000570883 NUP98P52948 1817 aa17.6■□□□□ 0.41
RPAIN-207ENST00000570883 BABAM1Q9NWV8 329 aa17.59■□□□□ 0.41
RPAIN-207ENST00000570883 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.41
RPAIN-207ENST00000570883 PXDNLA1KZ92 1463 aa17.58■□□□□ 0.41
RPAIN-207ENST00000570883 A0A087WZG4 1122 aa17.58■□□□□ 0.4
RPAIN-207ENST00000570883 POLRMTO00411 1230 aaKnown RBP17.58■□□□□ 0.4
RPAIN-207ENST00000570883 TM4SF1P30408 202 aa17.58■□□□□ 0.4
RPAIN-207ENST00000570883 NFIXQ14938 502 aa17.58■□□□□ 0.4
RPAIN-207ENST00000570883 TBC1D2BQ9UPU7 963 aa17.58■□□□□ 0.4
RPAIN-207ENST00000570883 CHL1O00533 1208 aa17.57■□□□□ 0.4
RPAIN-207ENST00000570883 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
RPAIN-207ENST00000570883 DLEC1Q9Y238 1755 aa17.57■□□□□ 0.4
RPAIN-207ENST00000570883 SENP3-EIF4A1A0A087X0R7 540 aa17.56■□□□□ 0.4
RPAIN-207ENST00000570883 CAMTA2O94983 1202 aa17.56■□□□□ 0.4
RPAIN-207ENST00000570883 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
RPAIN-207ENST00000570883 ARFGEF1Q9Y6D6 1849 aa17.54■□□□□ 0.4
RPAIN-207ENST00000570883 YBX3P16989 372 aaKnown RBP eCLIP17.54■□□□□ 0.4
RPAIN-207ENST00000570883 DZIP3Q86Y13 1208 aaKnown RBP17.54■□□□□ 0.4
RPAIN-207ENST00000570883 LAS1LQ9Y4W2 734 aaKnown RBP17.54■□□□□ 0.4
RPAIN-207ENST00000570883 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
RPAIN-207ENST00000570883 ZNF853P0CG23 659 aa17.53■□□□□ 0.4
RPAIN-207ENST00000570883 TBC1D9BQ66K14 1250 aa17.53■□□□□ 0.4
RPAIN-207ENST00000570883 CFAP44Q96MT7 982 aa17.53■□□□□ 0.4
RPAIN-207ENST00000570883 COL11A2P13942 1736 aaPredicted RBP17.52■□□□□ 0.4
RPAIN-207ENST00000570883 GPR162Q16538 588 aa17.52■□□□□ 0.4
RPAIN-207ENST00000570883 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.4
RPAIN-207ENST00000570883 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
RPAIN-207ENST00000570883 MBIPQ9NS73 344 aa17.52■□□□□ 0.4
RPAIN-207ENST00000570883 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.39
RPAIN-207ENST00000570883 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
RPAIN-207ENST00000570883 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
RPAIN-207ENST00000570883 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
RPAIN-207ENST00000570883 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
RPAIN-207ENST00000570883 SERPINB2P05120 415 aa17.5■□□□□ 0.39
RPAIN-207ENST00000570883 PDIA6Q15084 440 aa17.5■□□□□ 0.39
RPAIN-207ENST00000570883 LRP10Q7Z4F1 713 aa17.5■□□□□ 0.39
RPAIN-207ENST00000570883 IFT57Q9NWB7 429 aa17.5■□□□□ 0.39
RPAIN-207ENST00000570883 A0A0G2JLW4 131 aa17.49■□□□□ 0.39
RPAIN-207ENST00000570883 MYL6BP14649 208 aa17.49■□□□□ 0.39
RPAIN-207ENST00000570883 DPEP1P16444 411 aa17.49■□□□□ 0.39
RPAIN-207ENST00000570883 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
RPAIN-207ENST00000570883 TGFB2P61812 414 aa17.49■□□□□ 0.39
RPAIN-207ENST00000570883 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
RPAIN-207ENST00000570883 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
RPAIN-207ENST00000570883 TTLL7Q6ZT98 887 aa17.49■□□□□ 0.39
RPAIN-207ENST00000570883 CACNA1SQ13698 1873 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms