RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ZSCAN10Q96SZ4 725 aaPredicted RBP6.43□□□□□ -1.38
UBR1-211ENST00000569971 VRTNQ9H8Y1 702 aa6.43□□□□□ -1.38
UBR1-211ENST00000569971 IL2RAP01589 272 aa6.42□□□□□ -1.38
UBR1-211ENST00000569971 THBS1P07996 1170 aa6.42□□□□□ -1.38
UBR1-211ENST00000569971 SKIP12755 728 aa6.42□□□□□ -1.38
UBR1-211ENST00000569971 CENPCQ03188 943 aa6.42□□□□□ -1.38
UBR1-211ENST00000569971 UBAP2LQ14157 1087 aaKnown RBP6.42□□□□□ -1.38
UBR1-211ENST00000569971 EFHC2Q5JST6 749 aa6.42□□□□□ -1.38
UBR1-211ENST00000569971 TMCO4Q5TGY1 634 aa6.42□□□□□ -1.38
UBR1-211ENST00000569971 SLCO4C1Q6ZQN7 724 aa6.42□□□□□ -1.38
UBR1-211ENST00000569971 PGBD3Q8N328 593 aa6.42□□□□□ -1.38
UBR1-211ENST00000569971 FHDC1Q9C0D6 1143 aaPredicted RBP6.42□□□□□ -1.38
UBR1-211ENST00000569971 TMEM88BA6NKF7 163 aa6.41□□□□□ -1.38
UBR1-211ENST00000569971 C1orf216Q8TAB5 229 aa6.41□□□□□ -1.38
UBR1-211ENST00000569971 KLRG1Q96E93 195 aa6.41□□□□□ -1.38
UBR1-211ENST00000569971 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
UBR1-211ENST00000569971 KCNA1Q09470 495 aa6.4□□□□□ -1.38
UBR1-211ENST00000569971 SLFNL1Q499Z3 407 aa6.4□□□□□ -1.38
UBR1-211ENST00000569971 FIGNL1Q6PIW4 674 aa6.4□□□□□ -1.38
UBR1-211ENST00000569971 DEPDC4Q8N2C3 294 aa6.4□□□□□ -1.38
UBR1-211ENST00000569971 NFATC2IPQ8NCF5 419 aa6.4□□□□□ -1.38
UBR1-211ENST00000569971 RHBDD1Q8TEB9 315 aa6.4□□□□□ -1.38
UBR1-211ENST00000569971 SIRT1Q96EB6 747 aa6.4□□□□□ -1.38
UBR1-211ENST00000569971 CEP126Q9P2H0 1117 aa6.4□□□□□ -1.38
UBR1-211ENST00000569971 USP17L3A6NCW0 530 aa6.39□□□□□ -1.39
UBR1-211ENST00000569971 USP17L4A6NCW7 530 aa6.39□□□□□ -1.39
UBR1-211ENST00000569971 SHISA8B8ZZ34 492 aa6.39□□□□□ -1.39
UBR1-211ENST00000569971 PATL2C9JE40 543 aaKnown RBP6.39□□□□□ -1.39
UBR1-211ENST00000569971 K7ELQ4 463 aaPredicted RBP6.39□□□□□ -1.39
UBR1-211ENST00000569971 MFAP1P55081 439 aaKnown RBP6.39□□□□□ -1.39
UBR1-211ENST00000569971 SNRPNP63162 240 aaKnown RBP6.39□□□□□ -1.39
UBR1-211ENST00000569971 TMEM214Q6NUQ4 689 aaKnown RBP6.39□□□□□ -1.39
UBR1-211ENST00000569971 USP17L2Q6R6M4 530 aa6.39□□□□□ -1.39
UBR1-211ENST00000569971 USP17L1Q7RTZ2 530 aa6.39□□□□□ -1.39
UBR1-211ENST00000569971 EDARADDQ8WWZ3 215 aa6.39□□□□□ -1.39
UBR1-211ENST00000569971 RAB6BQ9NRW1 208 aa6.39□□□□□ -1.39
UBR1-211ENST00000569971 NDFIP2Q9NV92 336 aa6.39□□□□□ -1.39
UBR1-211ENST00000569971 USP17L5A8MUK1 530 aa6.38□□□□□ -1.39
UBR1-211ENST00000569971 GNB5O14775 395 aa6.38□□□□□ -1.39
UBR1-211ENST00000569971 ARAFP10398 606 aa6.38□□□□□ -1.39
UBR1-211ENST00000569971 USP4Q13107 963 aa6.38□□□□□ -1.39
UBR1-211ENST00000569971 C4orf17Q53FE4 359 aa6.38□□□□□ -1.39
UBR1-211ENST00000569971 PPARGC1BQ86YN6 1023 aaKnown RBP6.38□□□□□ -1.39
UBR1-211ENST00000569971 PHTF2Q8N3S3 785 aa6.38□□□□□ -1.39
UBR1-211ENST00000569971 RGS22Q8NE09 1264 aa6.38□□□□□ -1.39
UBR1-211ENST00000569971 GPAMQ9HCL2 828 aa6.38□□□□□ -1.39
UBR1-211ENST00000569971 AVENQ9NQS1 362 aaPredicted RBP6.38□□□□□ -1.39
UBR1-211ENST00000569971 NOP53Q9NZM5 478 aaKnown RBP6.38□□□□□ -1.39
UBR1-211ENST00000569971 MKRN1Q9UHC7 482 aaKnown RBP6.38□□□□□ -1.39
UBR1-211ENST00000569971 KRBA1A5PL33 1030 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 BMP4P12644 408 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 FGFR3P22607 806 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 BAG6P46379 1132 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 XP32Q5T750 250 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 TMEM164Q5U3C3 297 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 NLRP8Q86W28 1048 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 PLEKHM2Q8IWE5 1019 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 STK32AQ8WU08 396 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 CCDC85AQ96PX6 553 aaPredicted RBP6.37□□□□□ -1.39
UBR1-211ENST00000569971 ZMIZ1Q9ULJ6 1067 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 MTMR7Q9Y216 660 aa6.37□□□□□ -1.39
UBR1-211ENST00000569971 HOXB4P17483 251 aaPredicted RBP6.36□□□□□ -1.39
UBR1-211ENST00000569971 MSX1P28360 303 aa6.36□□□□□ -1.39
UBR1-211ENST00000569971 ELOAQ14241 798 aaKnown RBP6.36□□□□□ -1.39
UBR1-211ENST00000569971 TSGA10IPQ3SY00 556 aa6.36□□□□□ -1.39
UBR1-211ENST00000569971 FAM182BQ5T319 152 aa6.36□□□□□ -1.39
UBR1-211ENST00000569971 C1orf229Q6ZS94 237 aaPredicted RBP6.36□□□□□ -1.39
UBR1-211ENST00000569971 RNF135Q8IUD6 432 aa6.36□□□□□ -1.39
UBR1-211ENST00000569971 CHIC2Q9UKJ5 165 aa6.36□□□□□ -1.39
UBR1-211ENST00000569971 NOVA2Q9UNW9 492 aaKnown RBP6.36□□□□□ -1.39
UBR1-211ENST00000569971 IVNS1ABPQ9Y6Y0 642 aa6.36□□□□□ -1.39
UBR1-211ENST00000569971 EPXP11678 715 aa6.35□□□□□ -1.39
UBR1-211ENST00000569971 COL8A1P27658 744 aa6.35□□□□□ -1.39
UBR1-211ENST00000569971 DGKGP49619 791 aa6.35□□□□□ -1.39
UBR1-211ENST00000569971 NCOA4Q13772 614 aa6.35□□□□□ -1.39
UBR1-211ENST00000569971 CRTC2Q53ET0 693 aaPredicted RBP6.35□□□□□ -1.39
UBR1-211ENST00000569971 LINC00114Q6XXX2 140 aa6.35□□□□□ -1.39
UBR1-211ENST00000569971 RRAGCQ9HB90 399 aa6.35□□□□□ -1.39
UBR1-211ENST00000569971 DOLKQ9UPQ8 538 aa6.35□□□□□ -1.39
UBR1-211ENST00000569971 RASA1P20936 1047 aa6.34□□□□□ -1.39
UBR1-211ENST00000569971 PHKA2P46019 1235 aa6.34□□□□□ -1.39
UBR1-211ENST00000569971 TLR1Q15399 786 aa6.34□□□□□ -1.39
UBR1-211ENST00000569971 MAP7D1Q3KQU3 841 aa6.34□□□□□ -1.39
UBR1-211ENST00000569971 LARP1Q6PKG0 1096 aaKnown RBP6.34□□□□□ -1.39
UBR1-211ENST00000569971 PLPP7Q8NBV4 271 aa6.34□□□□□ -1.39
UBR1-211ENST00000569971 CDCA7Q9BWT1 371 aaPredicted RBP6.34□□□□□ -1.39
UBR1-211ENST00000569971 RUBCNLQ9H714 662 aa6.34□□□□□ -1.39
UBR1-211ENST00000569971 ETNK1Q9HBU6 452 aa6.34□□□□□ -1.39
UBR1-211ENST00000569971 DNAAF2Q9NVR5 837 aaKnown RBP6.34□□□□□ -1.39
UBR1-211ENST00000569971 GGA1Q9UJY5 639 aa6.34□□□□□ -1.39
UBR1-211ENST00000569971 FAM196BA6NMK8 535 aa6.33□□□□□ -1.4
UBR1-211ENST00000569971 BNIP3LO60238 219 aa6.33□□□□□ -1.4
UBR1-211ENST00000569971 AMPD1P23109 780 aa6.33□□□□□ -1.4
UBR1-211ENST00000569971 PTK7Q13308 1070 aa6.33□□□□□ -1.4
UBR1-211ENST00000569971 FOXD4L4Q8WXT5 416 aaPredicted RBP6.33□□□□□ -1.4
UBR1-211ENST00000569971 ABHD17AQ96GS6 310 aa6.33□□□□□ -1.4
UBR1-211ENST00000569971 PCDHGC4Q9Y5F7 938 aa6.33□□□□□ -1.4
UBR1-211ENST00000569971 USP17L15C9J2P7 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L10C9JJH3 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L13C9JLJ4 530 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms