RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 IL17REQ8NFR9 667 aa7.5□□□□□ -1.21
CYLD-216ENST00000569891 TAF1LQ8IZX4 1826 aa7.5□□□□□ -1.21
CYLD-216ENST00000569891 ERVV-2B6SEH9 535 aa7.5□□□□□ -1.21
CYLD-216ENST00000569891 TSPYL6Q8N831 410 aa7.5□□□□□ -1.21
CYLD-216ENST00000569891 SRCIN1Q9C0H9 1055 aa7.5□□□□□ -1.21
CYLD-216ENST00000569891 CACNA1FO60840 1977 aa7.5□□□□□ -1.21
CYLD-216ENST00000569891 ALDH1L1O75891 902 aa7.49□□□□□ -1.21
CYLD-216ENST00000569891 UBTFL1P0CB47 393 aaPredicted RBP7.49□□□□□ -1.21
CYLD-216ENST00000569891 MPRIPQ6WCQ1 1025 aa7.49□□□□□ -1.21
CYLD-216ENST00000569891 SMC5Q8IY18 1101 aa7.49□□□□□ -1.21
CYLD-216ENST00000569891 SLC52A2Q9HAB3 445 aa7.49□□□□□ -1.21
CYLD-216ENST00000569891 SNRPA1P09661 255 aaKnown RBP7.49□□□□□ -1.21
CYLD-216ENST00000569891 PHKG2P15735 406 aa7.49□□□□□ -1.21
CYLD-216ENST00000569891 EIF2S2P20042 333 aaKnown RBP7.49□□□□□ -1.21
CYLD-216ENST00000569891 EIF4A1P60842 406 aaKnown RBP7.49□□□□□ -1.21
CYLD-216ENST00000569891 BACH2Q9BYV9 841 aa7.49□□□□□ -1.21
CYLD-216ENST00000569891 ZBTB7BO15156 539 aaPredicted RBP7.49□□□□□ -1.21
CYLD-216ENST00000569891 RLBP1P12271 317 aa7.49□□□□□ -1.21
CYLD-216ENST00000569891 PDZRN3Q9UPQ7 1066 aa7.49□□□□□ -1.21
CYLD-216ENST00000569891 C5P01031 1676 aa7.49□□□□□ -1.21
CYLD-216ENST00000569891 NUP188Q5SRE5 1749 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 LARP1Q6PKG0 1096 aaKnown RBP7.48□□□□□ -1.21
CYLD-216ENST00000569891 ROBO1Q9Y6N7 1651 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 MYT1Q01538 1121 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 CHRNA2Q15822 529 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 IL27Q8NEV9 243 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 GPATCH3Q96I76 525 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 THRAP3Q9Y2W1 955 aaKnown RBP7.48□□□□□ -1.21
CYLD-216ENST00000569891 ITGB4P16144 1822 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 ERC1Q8IUD2 1116 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 ANKRD44Q8N8A2 993 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 DNAAF4Q8WXU2 420 aa7.48□□□□□ -1.21
CYLD-216ENST00000569891 CHD1LQ86WJ1 897 aa7.47□□□□□ -1.21
CYLD-216ENST00000569891 STRN4Q9NRL3 753 aa7.47□□□□□ -1.21
CYLD-216ENST00000569891 RAB11FIP3O75154 756 aa7.47□□□□□ -1.21
CYLD-216ENST00000569891 ANKRD45Q5TZF3 282 aa7.47□□□□□ -1.21
CYLD-216ENST00000569891 DDX21Q9NR30 783 aaKnown RBP eCLIP7.47□□□□□ -1.21
CYLD-216ENST00000569891 C9orf78Q9NZ63 289 aaPredicted RBP7.47□□□□□ -1.21
CYLD-216ENST00000569891 COL5A3P25940 1745 aaPredicted RBP7.47□□□□□ -1.21
CYLD-216ENST00000569891 ZNF790Q6PG37 636 aa7.47□□□□□ -1.21
CYLD-216ENST00000569891 CABLES1Q8TDN4 633 aa7.47□□□□□ -1.21
CYLD-216ENST00000569891 PCDHB15Q9Y5E8 787 aa7.47□□□□□ -1.21
CYLD-216ENST00000569891 MIS18AQ9NYP9 233 aa7.46□□□□□ -1.21
CYLD-216ENST00000569891 PARP4Q9UKK3 1724 aaKnown RBP7.46□□□□□ -1.21
CYLD-216ENST00000569891 HSP90B1P14625 803 aaKnown RBP7.46□□□□□ -1.21
CYLD-216ENST00000569891 NUCB1Q02818 461 aa7.46□□□□□ -1.21
CYLD-216ENST00000569891 RIC3Q7Z5B4 369 aa7.46□□□□□ -1.21
CYLD-216ENST00000569891 TMOD3Q9NYL9 352 aa7.46□□□□□ -1.21
CYLD-216ENST00000569891 EXOC5O00471 708 aa7.46□□□□□ -1.22
CYLD-216ENST00000569891 KSR2Q6VAB6 950 aa7.46□□□□□ -1.22
CYLD-216ENST00000569891 IPO9Q96P70 1041 aaKnown RBP7.46□□□□□ -1.22
CYLD-216ENST00000569891 AXIN2Q9Y2T1 843 aa7.46□□□□□ -1.22
CYLD-216ENST00000569891 OS9Q13438 667 aaPredicted RBP7.45□□□□□ -1.22
CYLD-216ENST00000569891 GIGYF1O75420 1035 aaPredicted RBP7.45□□□□□ -1.22
CYLD-216ENST00000569891 STARD3NLO95772 234 aa7.45□□□□□ -1.22
CYLD-216ENST00000569891 IGHDP01880 384 aa7.45□□□□□ -1.22
CYLD-216ENST00000569891 DDX17Q92841 729 aaKnown RBP7.45□□□□□ -1.22
CYLD-216ENST00000569891 LGR6Q9HBX8 967 aa7.45□□□□□ -1.22
CYLD-216ENST00000569891 IBTKQ9P2D0 1353 aaPredicted RBP7.45□□□□□ -1.22
CYLD-216ENST00000569891 DCTPP1Q9H773 170 aa7.45□□□□□ -1.22
CYLD-216ENST00000569891 COL5A2P05997 1499 aaPredicted RBP7.44□□□□□ -1.22
CYLD-216ENST00000569891 LINS1Q8NG48 757 aa7.44□□□□□ -1.22
CYLD-216ENST00000569891 THSD7AQ9UPZ6 1657 aa7.44□□□□□ -1.22
CYLD-216ENST00000569891 COL14A1Q05707 1796 aaKnown RBP7.44□□□□□ -1.22
CYLD-216ENST00000569891 NKX1-1Q15270 411 aaPredicted RBP7.44□□□□□ -1.22
CYLD-216ENST00000569891 ATP10DQ9P241 1426 aa7.44□□□□□ -1.22
CYLD-216ENST00000569891 TRIOO75962 3097 aa7.44□□□□□ -1.22
CYLD-216ENST00000569891 HSP90AB3PQ58FF7 597 aa7.44□□□□□ -1.22
CYLD-216ENST00000569891 BMP2KLQ5H9B9 411 aa7.44□□□□□ -1.22
CYLD-216ENST00000569891 BTG4Q9NY30 223 aa7.44□□□□□ -1.22
CYLD-216ENST00000569891 CHPF2Q9P2E5 772 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 CCDC9Q9Y3X0 531 aaKnown RBP7.43□□□□□ -1.22
CYLD-216ENST00000569891 MCCP23508 829 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 KIF6Q6ZMV9 814 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 VSIG10Q8N0Z9 540 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 LRRCC1Q9C099 1032 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 KDM3BQ7LBC6 1761 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 ATP8B2P98198 1209 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 DDX54Q8TDD1 881 aaKnown RBP7.43□□□□□ -1.22
CYLD-216ENST00000569891 NECTIN2Q92692 538 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 SMARCC1Q92922 1105 aaPredicted RBP7.43□□□□□ -1.22
CYLD-216ENST00000569891 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
CYLD-216ENST00000569891 UBAP1LF5GYI3 381 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 CDC45O75419 566 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 CEP85Q6P2H3 762 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 NFATC2IPQ8NCF5 419 aa7.43□□□□□ -1.22
CYLD-216ENST00000569891 ERC2O15083 957 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 LNPKQ9C0E8 428 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 REC8O95072 547 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 AOX1Q06278 1338 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 VPS13AQ96RL7 3174 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 LY75O60449 1722 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 KRT24Q2M2I5 525 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 KIF1BPQ96EK5 621 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 TNNQ9UQP3 1299 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 MRC1P22897 1456 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 PI4KAP2A4QPH2 592 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 RTL5Q5HYW3 569 aaPredicted RBP7.42□□□□□ -1.22
CYLD-216ENST00000569891 PI4KAP1Q8N8J0 262 aa7.42□□□□□ -1.22
CYLD-216ENST00000569891 MEGF6O75095 1541 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms