RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 LMOD3Q0VAK6 560 aa14.59□□□□□ -0.07
SHCBP1-207ENST00000569702 PNISRQ8TF01 805 aaKnown RBP14.59□□□□□ -0.07
SHCBP1-207ENST00000569702 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
SHCBP1-207ENST00000569702 ZBTB1Q9Y2K1 713 aa14.59□□□□□ -0.07
SHCBP1-207ENST00000569702 RRP7AQ9Y3A4 280 aaKnown RBP14.59□□□□□ -0.07
SHCBP1-207ENST00000569702 TRIM35Q9UPQ4 493 aa14.58□□□□□ -0.08
SHCBP1-207ENST00000569702 SNRPA1P09661 255 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-207ENST00000569702 GYS1P13807 737 aa14.57□□□□□ -0.08
SHCBP1-207ENST00000569702 NLGN1Q8N2Q7 840 aa14.57□□□□□ -0.08
SHCBP1-207ENST00000569702 USP16Q9Y5T5 823 aa14.57□□□□□ -0.08
SHCBP1-207ENST00000569702 USP42Q9H9J4 1324 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-207ENST00000569702 C4AP0C0L4 1744 aa14.57□□□□□ -0.08
SHCBP1-207ENST00000569702 PRAMEF22A3QJZ6 481 aa14.56□□□□□ -0.08
SHCBP1-207ENST00000569702 EIF5P55010 431 aaKnown RBP14.56□□□□□ -0.08
SHCBP1-207ENST00000569702 NEUROD2Q15784 382 aa14.56□□□□□ -0.08
SHCBP1-207ENST00000569702 MRS2Q9HD23 443 aa14.56□□□□□ -0.08
SHCBP1-207ENST00000569702 BABAM1Q9NWV8 329 aa14.56□□□□□ -0.08
SHCBP1-207ENST00000569702 KDM3BQ7LBC6 1761 aa14.55□□□□□ -0.08
SHCBP1-207ENST00000569702 CANXP27824 592 aaKnown RBP14.55□□□□□ -0.08
SHCBP1-207ENST00000569702 EIF4A1P60842 406 aaKnown RBP14.55□□□□□ -0.08
SHCBP1-207ENST00000569702 SRP68Q9UHB9 627 aaKnown RBP14.55□□□□□ -0.08
SHCBP1-207ENST00000569702 COL15A1P39059 1388 aa14.55□□□□□ -0.08
SHCBP1-207ENST00000569702 APAF1O14727 1248 aa14.54□□□□□ -0.08
SHCBP1-207ENST00000569702 A1BGP04217 495 aa14.54□□□□□ -0.08
SHCBP1-207ENST00000569702 MMP10P09238 476 aa14.54□□□□□ -0.08
SHCBP1-207ENST00000569702 IL6STP40189 918 aaPredicted RBP14.54□□□□□ -0.08
SHCBP1-207ENST00000569702 NARFQ9UHQ1 456 aa14.54□□□□□ -0.08
SHCBP1-207ENST00000569702 GOLGB1Q14789 3259 aaKnown RBP14.53□□□□□ -0.08
SHCBP1-207ENST00000569702 GIGYF1O75420 1035 aaPredicted RBP14.53□□□□□ -0.08
SHCBP1-207ENST00000569702 TSPYL4Q9UJ04 414 aa14.53□□□□□ -0.08
SHCBP1-207ENST00000569702 CD2APQ9Y5K6 639 aa14.53□□□□□ -0.08
SHCBP1-207ENST00000569702 UTRNP46939 3433 aa14.53□□□□□ -0.08
SHCBP1-207ENST00000569702 CHL1O00533 1208 aa14.52□□□□□ -0.09
SHCBP1-207ENST00000569702 ZPR1O75312 459 aa14.52□□□□□ -0.09
SHCBP1-207ENST00000569702 FKBP8Q14318 412 aa14.52□□□□□ -0.09
SHCBP1-207ENST00000569702 USPL1Q5W0Q7 1092 aa14.52□□□□□ -0.09
SHCBP1-207ENST00000569702 A0A087WZG4 1122 aa14.51□□□□□ -0.09
SHCBP1-207ENST00000569702 TM4SF1P30408 202 aa14.51□□□□□ -0.09
SHCBP1-207ENST00000569702 KLHL34Q8N239 644 aa14.51□□□□□ -0.09
SHCBP1-207ENST00000569702 NLGN2Q8NFZ4 835 aa14.51□□□□□ -0.09
SHCBP1-207ENST00000569702 BCL2L12Q9HB09 334 aa14.51□□□□□ -0.09
SHCBP1-207ENST00000569702 NBPF26B4DH59 902 aa14.5□□□□□ -0.09
SHCBP1-207ENST00000569702 NBPF10Q6P3W6 841 aaKnown RBP14.5□□□□□ -0.09
SHCBP1-207ENST00000569702 NBPF15Q8N660 670 aa14.5□□□□□ -0.09
SHCBP1-207ENST00000569702 PIP4K2AP48426 406 aaPredicted RBP14.49□□□□□ -0.09
SHCBP1-207ENST00000569702 DDR1Q08345 913 aa14.49□□□□□ -0.09
SHCBP1-207ENST00000569702 CFAP44Q96MT7 982 aa14.49□□□□□ -0.09
SHCBP1-207ENST00000569702 PARP3Q9Y6F1 533 aa14.49□□□□□ -0.09
SHCBP1-207ENST00000569702 LAMB4A4D0S4 1761 aa14.48□□□□□ -0.09
SHCBP1-207ENST00000569702 POLRMTO00411 1230 aaKnown RBP14.48□□□□□ -0.09
SHCBP1-207ENST00000569702 ZNF853P0CG23 659 aa14.48□□□□□ -0.09
SHCBP1-207ENST00000569702 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
SHCBP1-207ENST00000569702 TBC1D2BQ9UPU7 963 aa14.48□□□□□ -0.09
SHCBP1-207ENST00000569702 ZNF330Q9Y3S2 320 aaPredicted RBP14.48□□□□□ -0.09
SHCBP1-207ENST00000569702 CAMTA2O94983 1202 aa14.47□□□□□ -0.09
SHCBP1-207ENST00000569702 NFIXQ14938 502 aa14.47□□□□□ -0.09
SHCBP1-207ENST00000569702 CCDC27Q2M243 656 aa14.47□□□□□ -0.09
SHCBP1-207ENST00000569702 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
SHCBP1-207ENST00000569702 CALD1Q05682 793 aaKnown RBP14.46□□□□□ -0.09
SHCBP1-207ENST00000569702 NPM2Q86SE8 214 aaKnown RBP14.46□□□□□ -0.09
SHCBP1-207ENST00000569702 DZIP3Q86Y13 1208 aaKnown RBP14.46□□□□□ -0.09
SHCBP1-207ENST00000569702 IFT57Q9NWB7 429 aa14.46□□□□□ -0.09
SHCBP1-207ENST00000569702 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.09
SHCBP1-207ENST00000569702 C10orf71Q711Q0 1435 aa14.46□□□□□ -0.09
SHCBP1-207ENST00000569702 KIF13BQ9NQT8 1826 aa14.45□□□□□ -0.1
SHCBP1-207ENST00000569702 ERBB4Q15303 1308 aa14.45□□□□□ -0.1
SHCBP1-207ENST00000569702 RGL2O15211 777 aa14.45□□□□□ -0.1
SHCBP1-207ENST00000569702 MBIPQ9NS73 344 aa14.45□□□□□ -0.1
SHCBP1-207ENST00000569702 SCN7AQ01118 1682 aa14.45□□□□□ -0.1
SHCBP1-207ENST00000569702 TGFB2P61812 414 aa14.44□□□□□ -0.1
SHCBP1-207ENST00000569702 GNAI1P63096 354 aa14.44□□□□□ -0.1
SHCBP1-207ENST00000569702 PDIA6Q15084 440 aa14.44□□□□□ -0.1
SHCBP1-207ENST00000569702 KRT24Q2M2I5 525 aa14.44□□□□□ -0.1
SHCBP1-207ENST00000569702 TBC1D9BQ66K14 1250 aa14.44□□□□□ -0.1
SHCBP1-207ENST00000569702 CLEC4GQ6UXB4 293 aa14.44□□□□□ -0.1
SHCBP1-207ENST00000569702 LRP10Q7Z4F1 713 aa14.44□□□□□ -0.1
SHCBP1-207ENST00000569702 WWC1Q8IX03 1113 aa14.44□□□□□ -0.1
SHCBP1-207ENST00000569702 SERPINB2P05120 415 aa14.43□□□□□ -0.1
SHCBP1-207ENST00000569702 FAM9BQ8IZU0 186 aa14.43□□□□□ -0.1
SHCBP1-207ENST00000569702 BCORQ6W2J9 1755 aa14.42□□□□□ -0.1
SHCBP1-207ENST00000569702 NRXN2Q9P2S2 1712 aa14.42□□□□□ -0.1
SHCBP1-207ENST00000569702 SENP3-EIF4A1A0A087X0R7 540 aa14.42□□□□□ -0.1
SHCBP1-207ENST00000569702 HOXB7P09629 217 aa14.42□□□□□ -0.1
SHCBP1-207ENST00000569702 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
SHCBP1-207ENST00000569702 GPR162Q16538 588 aa14.42□□□□□ -0.1
SHCBP1-207ENST00000569702 PXDNLA1KZ92 1463 aa14.42□□□□□ -0.1
SHCBP1-207ENST00000569702 KIAA1551Q9HCM1 1747 aa14.41□□□□□ -0.1
SHCBP1-207ENST00000569702 AFDNP55196 1824 aaKnown RBP14.41□□□□□ -0.1
SHCBP1-207ENST00000569702 MYL6BP14649 208 aa14.41□□□□□ -0.1
SHCBP1-207ENST00000569702 YBX3P16989 372 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHCBP1-207ENST00000569702 BICDL1Q6ZP65 573 aa14.41□□□□□ -0.1
SHCBP1-207ENST00000569702 ZNF652Q9Y2D9 606 aa14.41□□□□□ -0.1
SHCBP1-207ENST00000569702 IL16Q14005 1332 aa14.41□□□□□ -0.1
SHCBP1-207ENST00000569702 CARMIL3Q8ND23 1372 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 A0A0G2JLW4 131 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 ERVV-1B6SEH8 477 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 CCER2I3L3R5 266 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 KCNA3P22001 575 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 HLFQ16534 295 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 PROSER3Q2NL68 480 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms