RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 TEX13AQ9BXU3 409 aaPredicted RBP16.64■□□□□ 0.25
GINS3-209ENST00000567909 MTFR1LQ9H019 292 aa16.64■□□□□ 0.25
GINS3-209ENST00000567909 C4AP0C0L4 1744 aa16.63■□□□□ 0.25
GINS3-209ENST00000567909 TRAPPC3LQ5T215 181 aa16.63■□□□□ 0.25
GINS3-209ENST00000567909 INTS5Q6P9B9 1019 aaKnown RBP16.63■□□□□ 0.25
GINS3-209ENST00000567909 SLC16A10Q8TF71 515 aa16.63■□□□□ 0.25
GINS3-209ENST00000567909 LAMB4A4D0S4 1761 aa16.62■□□□□ 0.25
GINS3-209ENST00000567909 SNRPA1P09661 255 aaKnown RBP16.62■□□□□ 0.25
GINS3-209ENST00000567909 CANXP27824 592 aaKnown RBP16.62■□□□□ 0.25
GINS3-209ENST00000567909 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
GINS3-209ENST00000567909 MSL1Q68DK7 614 aa16.62■□□□□ 0.25
GINS3-209ENST00000567909 ZBTB1Q9Y2K1 713 aa16.62■□□□□ 0.25
GINS3-209ENST00000567909 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
GINS3-209ENST00000567909 ARHGEF1Q92888 912 aaKnown RBP16.61■□□□□ 0.25
GINS3-209ENST00000567909 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
GINS3-209ENST00000567909 ADRA2BP18089 450 aa16.6■□□□□ 0.25
GINS3-209ENST00000567909 RFC4P35249 363 aa16.6■□□□□ 0.25
GINS3-209ENST00000567909 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
GINS3-209ENST00000567909 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
GINS3-209ENST00000567909 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
GINS3-209ENST00000567909 CHL1O00533 1208 aa16.59■□□□□ 0.25
GINS3-209ENST00000567909 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
GINS3-209ENST00000567909 A1BGP04217 495 aa16.59■□□□□ 0.25
GINS3-209ENST00000567909 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
GINS3-209ENST00000567909 CFAP44Q96MT7 982 aa16.59■□□□□ 0.25
GINS3-209ENST00000567909 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
GINS3-209ENST00000567909 PTGER2P43116 358 aa16.58■□□□□ 0.24
GINS3-209ENST00000567909 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
GINS3-209ENST00000567909 CCDC27Q2M243 656 aa16.58■□□□□ 0.24
GINS3-209ENST00000567909 COL24A1Q17RW2 1714 aa16.58■□□□□ 0.24
GINS3-209ENST00000567909 COL15A1P39059 1388 aa16.57■□□□□ 0.24
GINS3-209ENST00000567909 POLD1P28340 1107 aa16.57■□□□□ 0.24
GINS3-209ENST00000567909 GNAI1P63096 354 aa16.57■□□□□ 0.24
GINS3-209ENST00000567909 MBIPQ9NS73 344 aa16.57■□□□□ 0.24
GINS3-209ENST00000567909 IFT57Q9NWB7 429 aa16.57■□□□□ 0.24
GINS3-209ENST00000567909 SRP68Q9UHB9 627 aaKnown RBP16.57■□□□□ 0.24
GINS3-209ENST00000567909 KRT24Q2M2I5 525 aa16.56■□□□□ 0.24
GINS3-209ENST00000567909 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
GINS3-209ENST00000567909 ARXQ96QS3 562 aa16.56■□□□□ 0.24
GINS3-209ENST00000567909 ZPR1O75312 459 aa16.55■□□□□ 0.24
GINS3-209ENST00000567909 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
GINS3-209ENST00000567909 EIF5P55010 431 aaKnown RBP16.55■□□□□ 0.24
GINS3-209ENST00000567909 SGIP1Q9BQI5 828 aa16.55■□□□□ 0.24
GINS3-209ENST00000567909 USP42Q9H9J4 1324 aaKnown RBP16.54■□□□□ 0.24
GINS3-209ENST00000567909 EIF2S2P20042 333 aaKnown RBP16.54■□□□□ 0.24
GINS3-209ENST00000567909 IL6STP40189 918 aaPredicted RBP16.54■□□□□ 0.24
GINS3-209ENST00000567909 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
GINS3-209ENST00000567909 NECTIN2Q92692 538 aa16.54■□□□□ 0.24
GINS3-209ENST00000567909 NBPF26B4DH59 902 aa16.53■□□□□ 0.24
GINS3-209ENST00000567909 GYS1P13807 737 aa16.53■□□□□ 0.24
GINS3-209ENST00000567909 USPL1Q5W0Q7 1092 aa16.53■□□□□ 0.24
GINS3-209ENST00000567909 NBPF10Q6P3W6 841 aaKnown RBP16.53■□□□□ 0.24
GINS3-209ENST00000567909 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
GINS3-209ENST00000567909 NBPF15Q8N660 670 aa16.53■□□□□ 0.24
GINS3-209ENST00000567909 TSR2Q969E8 191 aaKnown RBP16.53■□□□□ 0.24
GINS3-209ENST00000567909 A0A087WZG4 1122 aa16.52■□□□□ 0.24
GINS3-209ENST00000567909 NLGN1Q8N2Q7 840 aa16.52■□□□□ 0.24
GINS3-209ENST00000567909 NGEFQ8N5V2 710 aa16.52■□□□□ 0.24
GINS3-209ENST00000567909 NARFQ9UHQ1 456 aa16.52■□□□□ 0.24
GINS3-209ENST00000567909 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.24
GINS3-209ENST00000567909 IL16Q14005 1332 aa16.51■□□□□ 0.23
GINS3-209ENST00000567909 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
GINS3-209ENST00000567909 MMP10P09238 476 aa16.51■□□□□ 0.23
GINS3-209ENST00000567909 MYL6BP14649 208 aa16.51■□□□□ 0.23
GINS3-209ENST00000567909 FKBP8Q14318 412 aa16.51■□□□□ 0.23
GINS3-209ENST00000567909 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
GINS3-209ENST00000567909 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
GINS3-209ENST00000567909 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
GINS3-209ENST00000567909 DZIP3Q86Y13 1208 aaKnown RBP16.5■□□□□ 0.23
GINS3-209ENST00000567909 BCORQ6W2J9 1755 aa16.49■□□□□ 0.23
GINS3-209ENST00000567909 FHDC1Q9C0D6 1143 aaPredicted RBP16.49■□□□□ 0.23
GINS3-209ENST00000567909 ANXA1P04083 346 aa16.48■□□□□ 0.23
GINS3-209ENST00000567909 HDGFL1Q5TGJ6 251 aa16.48■□□□□ 0.23
GINS3-209ENST00000567909 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
GINS3-209ENST00000567909 ERBB4Q15303 1308 aa16.47■□□□□ 0.23
GINS3-209ENST00000567909 CAMTA2O94983 1202 aa16.47■□□□□ 0.23
GINS3-209ENST00000567909 HOXB7P09629 217 aa16.47■□□□□ 0.23
GINS3-209ENST00000567909 PROSER3Q2NL68 480 aa16.47■□□□□ 0.23
GINS3-209ENST00000567909 BICDL1Q6ZP65 573 aa16.47■□□□□ 0.23
GINS3-209ENST00000567909 BCL2L12Q9HB09 334 aa16.47■□□□□ 0.23
GINS3-209ENST00000567909 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
GINS3-209ENST00000567909 NUP98P52948 1817 aa16.47■□□□□ 0.23
GINS3-209ENST00000567909 FANCIQ9NVI1 1328 aa16.46■□□□□ 0.23
GINS3-209ENST00000567909 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
GINS3-209ENST00000567909 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
GINS3-209ENST00000567909 CHPF2Q9P2E5 772 aa16.46■□□□□ 0.23
GINS3-209ENST00000567909 AFDNP55196 1824 aaKnown RBP16.46■□□□□ 0.23
GINS3-209ENST00000567909 ZNF521Q96K83 1311 aa16.45■□□□□ 0.22
GINS3-209ENST00000567909 NFIXQ14938 502 aa16.45■□□□□ 0.22
GINS3-209ENST00000567909 TTLL7Q6ZT98 887 aa16.45■□□□□ 0.22
GINS3-209ENST00000567909 DDR1Q08345 913 aa16.44■□□□□ 0.22
GINS3-209ENST00000567909 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
GINS3-209ENST00000567909 PDIA6Q15084 440 aa16.44■□□□□ 0.22
GINS3-209ENST00000567909 TBC1D9BQ66K14 1250 aa16.44■□□□□ 0.22
GINS3-209ENST00000567909 KIF6Q6ZMV9 814 aa16.44■□□□□ 0.22
GINS3-209ENST00000567909 SYT17Q9BSW7 474 aa16.44■□□□□ 0.22
GINS3-209ENST00000567909 MYH16Q9H6N6 1097 aa16.44■□□□□ 0.22
GINS3-209ENST00000567909 DDX21Q9NR30 783 aaKnown RBP eCLIP16.44■□□□□ 0.22
GINS3-209ENST00000567909 TM4SF1P30408 202 aa16.43■□□□□ 0.22
GINS3-209ENST00000567909 AIMP1Q12904 312 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms